BDGP Sequence Production Resources |
Search the DGRC for LD10519
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 105 |
Well: | 19 |
Vector: | pBS SK- |
Associated Gene/Transcript | plexA-RE |
Protein status: | LD10519.pep: wuzgold |
Preliminary Size: | 2740 |
Sequenced Size: | 2743 |
Gene | Date | Evidence |
---|---|---|
CG11081 | 2003-04-01 | Blastp of sequenced clone |
plexA | 2008-04-29 | Release 5.5 accounting |
plexA | 2008-08-15 | Release 5.9 accounting |
plexA | 2008-12-18 | 5.12 accounting |
2743 bp (2743 high quality bases) assembled on 2003-04-01
GenBank Submission: BT006027
> LD10519.complete CGAAAATAGACAGAAATTATGTTCAGTGACTTGCGATGTAAAGAAATAAT AGTTAATGAGTGAAATATAGGAAAACAAACAGTTTACATGATGGTCATAC AAGTTATTGCTCCAAGTTAAATTATCTTGAATGGAACGGATAATAAAAAT TGCAAGAATGACACCAACGCAAAGGAAATTTTAATATTTACGTAAAATTT CAAATAAATAAGGGACATACAAGCGCCTACAAGTAACAATTTCATAAATA AGGTAGCTTTGATAGTCCTGTTTAAGGAGCGATTGTGGAGATGAATTTTG TTCTTAGTGTGTTGTTAATAGCAATTCTTAAAGATAAGTATGATTACTGG CTGCCATCGAGGACAGGTTGTCAAACCCTGGCAGCAAATATATGGTCTGA CAAGACGACTGCGCAAAATGAGCCGATAAATTTGACTAATGCAAATGCAC CGATAAAGAATGCAAAGAATCTGAATTCTACGATTACAAATGTAGCTGCG TTTGACACCAAATTGAATCACCTATTAGTGGACACCATTACTGGACGAGT CTTCGTTGGTGGTGTTAACAGGTTGTATCAGTTGTCGCCTGATTTGGAGC TTTCCGAAACTGTGAAAACGGGGCCTCAAAATGATTCCGTCGAGTGTAGC ATTCTTGATTGTCCATTAAATGCAGTTCGCAGTCCGACGGACAATTATAA TAAGGTCTTGCTCATTGATCGTGCAACTTCAAGACTTATTGCGTGTGGAT CACTATTTCAAGGTACATGCACAGTTCGTAATCTTCAAAATGTCAGCATA ATTGAGCATGAAGTTCCTGATGCTGTTGTGGCTAATGATGCCAACTCCTC AACCGTAGCTTTTATTGCGCCGGGACCTCCACAACATCCGGTGACTAATG TGATGTACGTCGGAGTTACATACACAAATAATTCACCGTACCGCAGTGAA ATTCCCGCAGTTGCATCCCGCTCCCTCGAAAAGACTAAAATGTTTCAGAT TGCTTCCTCGGCAGTTACAACTGGAACGAGAACTTTTATAAACTCATACG CACGTGAAACATATTTTGTCAACTATGTTTATGGATTCAGTTCTGAGCGA TTTTCTTACTTTCTAACAACACAGTTAAAGCACAGTCACCATTCTTCTCC TAAAGAGTACATAACGAAACTCGTACGAATATGTCAGGAAGACTCGAACT ATTATTCTTACACTGAAATTCCAGTGGAATGTATAAGTGATGCTCAAGGC GGCACTAAATTCAACTTGGTTCAGGCTGGATTCTTGGGAAAACCTAGCTC AGACCTGGCTCAAAGCTTAGGTATATCTATTCAAGATGATGTCCTCTTTG CTGTTTTTTCAAAAGGAGAAGGGAATACACCAACGAACAATTCTGCACTC TGCATTTACTCATTAAAATCTATTCGTCGAAAGTTTATGCAAAACATAAA ATCCTGTTTTAACGGAAGTGGCATGAGGGGCCTGGACTTTATATCACCCA GCATGCCATGTGTTCTAACGAGTGGAGAACAGGCGCTACTGGGCGAGTAA TTCTGTACGATGAGGACGTAACATCAAAAACGGAGAGCGAATGGAAAAAG CTCAACACTTTGCAGCACTATAATGTTCCGGATGGAGCCGGGCTAAGCTT AGTACCAAAGCAAAGTTCCATTTATAACTTCAGTATTTTATCGGACAAAA ATGAAAAATCGCACAAGTATGAAACTCTTAATATATCGAAATACACCTCC TCCTCTCCGACATTTAGCCGCGCAGGAAGTCCTCTTAACAATGATATGCA TGAAAATGGTCTGAGATACTGGCATCTAGTAAAACATCATGATAGTGATA TGCAAAAAGAAGGGGAACGGGTTAACAAATTAGTGTCAGAGATTTACTTA ACCAGGCTATTGGCTACTAAAGGAACGCTTCAGAAATTTGTAGATGATCT CTTTGAAACGATATTTAGCACCGCTCACCGTGGATCGGCACTTCCATTAG CTATAAAGTACATGTTTGATTTTCTTGACGATCAAGCTCAATTGCACGGT ATTACTGATCCAGAAGTTGTGCATACTTGGAAAAGTAACAGCTTACCATT GAGGTTTTGGGTGAACTTAATTAAAAATCCAAATTTTGTCTTTGACATCC ATAAATCGAACATAGTGGATTCCTGCCTGTCAGTAGTAGCTCAAACTTTT ATGGATTCTTGTTCGACTTCTGATCATCGATTGGGCAAAGACTCACCAAG CTCGAAACTTCTGTATGCAAAAGATATACCAGAGTATCGAAAATGGGTAG ATCGCTATTATAGAGACATTCGGGATATGTCCCCCATTTCAGATCAGGAC ATGAACGCCATGCTTGCGGAAGAGTCAAGGCTGCACACAACAGAATTTAA TACGAATTGTGCTTTACATGAGCTATACACATACGCTGTGAAGTACAATG AACAACTAACTGTTACACTTGAAGAGGATGAATTTTCGCAAAAGCAGCGA TTGGCTTTTAAATTAGAGCAAGTTCACAACATAATGTCGTCAGAATAAGA GCTGCGCCATCCTACCAAGATGACAACAAAATACTAAAAGTTCAACATTA TGAAAATCATTTGTATATGTCGTATTTGCTCATTAATTACTTAATAGTAT GTTATTGTATGTATGTATGTATTTAATTTAAGTAAACTCATGTAAGATCT AATATGCAAGACAAGTAATCTAACTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
plexA-RE | 2979 | plexA-RE | 94..2825 | 1..2732 | 13645 | 99.9 | Plus |
plexA-RA | 6887 | plexA-RA | 94..1614 | 1..1521 | 7590 | 99.9 | Plus |
plexA.c | 7390 | plexA.c | 61..1581 | 1..1521 | 7590 | 99.9 | Plus |
plexA-RA | 6887 | plexA-RA | 5193..6405 | 1520..2732 | 6065 | 100 | Plus |
plexA.c | 7390 | plexA.c | 5160..6372 | 1520..2732 | 6065 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr4 | 1351717 | chr4 | 1042773..1044211 | 1520..82 | 7150 | 99.8 | Minus |
chr4 | 1351717 | chr4 | 1035507..1035896 | 2106..1717 | 1950 | 100 | Minus |
chr4 | 1351717 | chr4 | 1034860..1035071 | 2591..2380 | 1060 | 100 | Minus |
chr4 | 1351717 | chr4 | 1035966..1036165 | 1719..1520 | 1000 | 100 | Minus |
chr4 | 1351717 | chr4 | 1035127..1035273 | 2380..2234 | 735 | 100 | Minus |
chr4 | 1351717 | chr4 | 1034172..1034307 | 2725..2590 | 680 | 100 | Minus |
chr4 | 1351717 | chr4 | 1035321..1035454 | 2235..2102 | 670 | 100 | Minus |
chr4 | 1351717 | chr4 | 1047476..1047558 | 83..1 | 415 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
4 | 1348131 | 4 | 1022242..1023680 | 1520..82 | 7180 | 99.9 | Minus |
4 | 1348131 | 4 | 1014963..1015352 | 2106..1717 | 1950 | 100 | Minus |
4 | 1348131 | 4 | 1014316..1014527 | 2591..2380 | 1060 | 100 | Minus |
4 | 1348131 | 4 | 1015422..1015621 | 1719..1520 | 1000 | 100 | Minus |
4 | 1348131 | 4 | 1014583..1014729 | 2380..2234 | 735 | 100 | Minus |
4 | 1348131 | 4 | 1013626..1013768 | 2732..2590 | 715 | 100 | Minus |
4 | 1348131 | 4 | 1014777..1014910 | 2235..2102 | 670 | 100 | Minus |
4 | 1348131 | 4 | 1026961..1027043 | 83..1 | 415 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
4 | 1331231 | 4 | 1022242..1023680 | 1520..82 | 7180 | 99.9 | Minus |
4 | 1331231 | 4 | 1014963..1015352 | 2106..1717 | 1950 | 100 | Minus |
4 | 1331231 | 4 | 1014316..1014527 | 2591..2380 | 1060 | 100 | Minus |
4 | 1331231 | 4 | 1015422..1015621 | 1719..1520 | 1000 | 100 | Minus |
4 | 1331231 | 4 | 1014583..1014729 | 2380..2234 | 735 | 100 | Minus |
4 | 1331231 | 4 | 1013626..1013768 | 2732..2590 | 715 | 100 | Minus |
4 | 1331231 | 4 | 1014777..1014910 | 2235..2102 | 670 | 100 | Minus |
4 | 1331231 | 4 | 1026961..1027043 | 83..1 | 415 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
invader1 | 4032 | invader1 INVADER 4032bp | 3322..3411 | 2200..2117 | 129 | 65.6 | Minus |
invader3 | 5484 | invader3 INVADER3 5484bp | 5073..5152 | 2642..2722 | 123 | 64.6 | Plus |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 1653..1724 | 2677..2611 | 122 | 69.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr4 | 1034172..1034307 | 2590..2725 | 100 | <- | Minus |
chr4 | 1034862..1035070 | 2381..2589 | 100 | <- | Minus |
chr4 | 1035127..1035272 | 2235..2380 | 100 | <- | Minus |
chr4 | 1035322..1035452 | 2104..2234 | 100 | <- | Minus |
chr4 | 1035510..1035896 | 1717..2103 | 100 | <- | Minus |
chr4 | 1035969..1036164 | 1521..1716 | 100 | <- | Minus |
chr4 | 1042773..1044211 | 82..1520 | 99 | <- | Minus |
chr4 | 1047478..1047558 | 1..81 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
plexA-RE | 1..1260 | 291..1550 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
plexA-RE | 1..1260 | 291..1550 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
plexA-RA | 1..1233 | 291..1522 | 99 | -- | Plus |
plexA-RA | 4813..5838 | 1523..2548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
plexA-RE | 1..1260 | 291..1550 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PlexA-RA | 1..1233 | 291..1522 | 99 | -- | Plus |
PlexA-RA | 4813..5838 | 1523..2548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
plexA-RE | 1..2725 | 1..2725 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
plexA-RE | 1..2725 | 1..2725 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
plexA-RA | 59..1581 | 1..1522 | 99 | -- | Plus |
plexA-RA | 5161..6363 | 1523..2725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
plexA-RE | 1..2725 | 1..2725 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PlexA-RA | 59..1581 | 1..1522 | 99 | -- | Plus |
PlexA-RA | 5161..6363 | 1523..2725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 1013633..1013768 | 2590..2725 | 100 | <- | Minus |
4 | 1014318..1014526 | 2381..2589 | 100 | <- | Minus |
4 | 1014583..1014728 | 2235..2380 | 100 | <- | Minus |
4 | 1014778..1014908 | 2104..2234 | 100 | <- | Minus |
4 | 1014966..1015352 | 1717..2103 | 100 | <- | Minus |
4 | 1015425..1015620 | 1521..1716 | 100 | <- | Minus |
4 | 1022242..1023680 | 82..1520 | 99 | <- | Minus |
4 | 1026963..1027043 | 1..81 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 1013633..1013768 | 2590..2725 | 100 | <- | Minus |
4 | 1014318..1014526 | 2381..2589 | 100 | <- | Minus |
4 | 1014583..1014728 | 2235..2380 | 100 | <- | Minus |
4 | 1014778..1014908 | 2104..2234 | 100 | <- | Minus |
4 | 1014966..1015352 | 1717..2103 | 100 | <- | Minus |
4 | 1015425..1015620 | 1521..1716 | 100 | <- | Minus |
4 | 1022242..1023680 | 82..1520 | 99 | <- | Minus |
4 | 1026963..1027043 | 1..81 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 1013633..1013768 | 2590..2725 | 100 | <- | Minus |
4 | 1014318..1014526 | 2381..2589 | 100 | <- | Minus |
4 | 1014583..1014728 | 2235..2380 | 100 | <- | Minus |
4 | 1014778..1014908 | 2104..2234 | 100 | <- | Minus |
4 | 1014966..1015352 | 1717..2103 | 100 | <- | Minus |
4 | 1015425..1015620 | 1521..1716 | 100 | <- | Minus |
4 | 1022242..1023680 | 82..1520 | 99 | <- | Minus |
4 | 1026963..1027043 | 1..81 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_4 | 1034259..1034394 | 2590..2725 | 100 | <- | Minus |
arm_4 | 1034944..1035152 | 2381..2589 | 100 | <- | Minus |
arm_4 | 1035209..1035354 | 2235..2380 | 100 | <- | Minus |
arm_4 | 1035404..1035534 | 2104..2234 | 100 | <- | Minus |
arm_4 | 1035592..1035978 | 1717..2103 | 100 | <- | Minus |
arm_4 | 1036051..1036246 | 1521..1716 | 100 | <- | Minus |
arm_4 | 1042868..1044306 | 82..1520 | 99 | <- | Minus |
arm_4 | 1047589..1047669 | 1..81 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 1014318..1014526 | 2381..2589 | 100 | <- | Minus |
4 | 1014583..1014728 | 2235..2380 | 100 | <- | Minus |
4 | 1014778..1014908 | 2104..2234 | 100 | <- | Minus |
4 | 1014966..1015352 | 1717..2103 | 100 | <- | Minus |
4 | 1015425..1015620 | 1521..1716 | 100 | <- | Minus |
4 | 1022242..1023680 | 82..1520 | 99 | <- | Minus |
4 | 1026963..1027043 | 1..81 | 100 | Minus | |
4 | 1013633..1013768 | 2590..2725 | 100 | <- | Minus |
Translation from 290 to 1549
> LD10519.pep MNFVLSVLLIAILKDKYDYWLPSRTGCQTLAANIWSDKTTAQNEPINLTN ANAPIKNAKNLNSTITNVAAFDTKLNHLLVDTITGRVFVGGVNRLYQLSP DLELSETVKTGPQNDSVECSILDCPLNAVRSPTDNYNKVLLIDRATSRLI ACGSLFQGTCTVRNLQNVSIIEHEVPDAVVANDANSSTVAFIAPGPPQHP VTNVMYVGVTYTNNSPYRSEIPAVASRSLEKTKMFQIASSAVTTGTRTFI NSYARETYFVNYVYGFSSERFSYFLTTQLKHSHHSSPKEYITKLVRICQE DSNYYSYTEIPVECISDAQGGTKFNLVQAGFLGKPSSDLAQSLGISIQDD VLFAVFSKGEGNTPTNNSALCIYSLKSIRRKFMQNIKSCFNGSGMRGLDF ISPSMPCVLTSGEQALLGE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19331-PA | 2057 | GF19331-PA | 93..419 | 77..405 | 537 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16425-PA | 1945 | GG16425-PA | 1..410 | 1..410 | 2108 | 96.3 | Plus |
Dere\GG16467-PA | 2052 | GG16467-PA | 69..415 | 59..405 | 543 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23973-PA | 1913 | GH23973-PA | 29..377 | 62..410 | 1766 | 94.3 | Plus |
Dgri\GH23993-PA | 2067 | GH23993-PA | 111..435 | 77..402 | 546 | 37.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PlexA-PF | 1928 | CG11081-PF | 1..410 | 1..410 | 2122 | 100 | Plus |
PlexA-PA | 1945 | CG11081-PA | 1..410 | 1..410 | 2122 | 100 | Plus |
PlexB-PB | 2051 | CG17245-PB | 14..412 | 4..402 | 539 | 33.4 | Plus |
PlexB-PA | 2051 | CG17245-PA | 14..412 | 4..402 | 539 | 33.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14102-PA | 1895 | GI14102-PA | 11..359 | 62..410 | 1762 | 94.3 | Plus |
Dmoj\GI14120-PA | 2056 | GI14120-PA | 97..424 | 77..405 | 528 | 36.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17574-PA | 1909 | GL17574-PA | 6..374 | 42..410 | 1850 | 93.8 | Plus |
Dper\GL18389-PA | 2069 | GL18389-PA | 100..423 | 77..402 | 539 | 36.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10747-PA | 1628 | GA10747-PA | 1..411 | 1..410 | 1907 | 87.9 | Plus |
Dpse\GA14409-PA | 2069 | GA14409-PA | 100..423 | 77..402 | 540 | 36.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13016-PA | 1364 | GM13016-PA | 1..409 | 1..410 | 2118 | 97.8 | Plus |
Dsec\GM23238-PA | 2004 | GM23238-PA | 89..412 | 77..402 | 538 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\plexA-PA | 900 | GD24364-PA | 1..409 | 1..410 | 2151 | 98 | Plus |
Dsim\GD24393-PA | 950 | GD24393-PA | 5..321 | 87..405 | 525 | 36.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20569-PA | 1955 | GJ20569-PA | 54..419 | 46..410 | 1808 | 92.9 | Plus |
Dvir\GJ14688-PA | 2069 | GJ14688-PA | 115..439 | 77..402 | 525 | 36 | Plus |
Translation from 290 to 1549
> LD10519.hyp MNFVLSVLLIAILKDKYDYWLPSRTGCQTLAANIWSDKTTAQNEPINLTN ANAPIKNAKNLNSTITNVAAFDTKLNHLLVDTITGRVFVGGVNRLYQLSP DLELSETVKTGPQNDSVECSILDCPLNAVRSPTDNYNKVLLIDRATSRLI ACGSLFQGTCTVRNLQNVSIIEHEVPDAVVANDANSSTVAFIAPGPPQHP VTNVMYVGVTYTNNSPYRSEIPAVASRSLEKTKMFQIASSAVTTGTRTFI NSYARETYFVNYVYGFSSERFSYFLTTQLKHSHHSSPKEYITKLVRICQE DSNYYSYTEIPVECISDAQGGTKFNLVQAGFLGKPSSDLAQSLGISIQDD VLFAVFSKGEGNTPTNNSALCIYSLKSIRRKFMQNIKSCFNGSGMRGLDF ISPSMPCVLTSGEQALLGE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PlexA-PF | 1928 | CG11081-PF | 1..410 | 1..410 | 2122 | 100 | Plus |
PlexA-PA | 1945 | CG11081-PA | 1..410 | 1..410 | 2122 | 100 | Plus |
PlexB-PB | 2051 | CG17245-PB | 14..412 | 4..402 | 539 | 33.4 | Plus |
PlexB-PA | 2051 | CG17245-PA | 14..412 | 4..402 | 539 | 33.4 | Plus |