BDGP Sequence Production Resources |
Search the DGRC for LD10532
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 105 |
Well: | 32 |
Vector: | pBS SK- |
Associated Gene/Transcript | emc-RA |
Protein status: | LD10532.pep: gold |
Preliminary Size: | 2099 |
Sequenced Size: | 2046 |
Gene | Date | Evidence |
---|---|---|
CG1007 | 2001-01-01 | Release 2 assignment |
CG1007 | 2001-11-09 | Blastp of sequenced clone |
CG1007 | 2003-01-01 | Sim4 clustering to Release 3 |
emc | 2008-04-29 | Release 5.5 accounting |
emc | 2008-08-15 | Release 5.9 accounting |
emc | 2008-12-18 | 5.12 accounting |
2046 bp (2046 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069405
> LD10532.complete CTCGCAGCAAAAGATATAGAAATCGAGAACGTAAACGCAGAAAACACGCT GGATTAAAGTGTTTCGTTTCGAACATCGACAGAGTGAGAAAACAAAGTGA AGTGAGCGCACAAAGCCGAAATCAAATCAAATTGAAAAGCCAGTCAAGAG CAATCTTTAACTGAACCTCGCAAGTAATCCGGTACGACCGTGTAACAACC GCCAAGATTCTACTCAAGGAGCGTAAAGCAATCATCTCCAGAATGAAGTC CCTGACGGCCGTCTGCCAGACAGGTGCCTCCGGAATGCCGGCCTTGAATG CCAGCGGGCGCATCCAGCGCCATCCCACGCACCGCGGCGACGGGGAGAAC GCCGAGATGAAGATGTATCTGTCCAAACTGAAGGACCTCGTTCCGTTCAT GCCCAAGAACAGGAAGCTCACCAAGCTGGAGATCATCCAGCACGTCATCG ACTACATCTGCGACCTGCAGACCGAGCTGGAGACGCACCCCGAGATGGGC AACTTCGATGCGGCAGCCGCTCTGACGGCGGTGAACGGACTCCACGAGGA CGAGGACAGCGACATGGAGGATGCGGATGCCGAGGCAGAAGCGGAAGTCG ATCCAGATATCCTCGCCCAGCGCCTGAATGCCGAGCAGCCGGCGAAAGTC TCTAGTCCCGCCGCCCGTCTCCCGCTTACCGATCGCCAAACGCCCAACAC TCTTGTGGCGCCCGCCCATCCGCAGCAGCATCAGCAGCAGCAGCAACTGC AACTGCAGCAGCAACAACTGCAATCACAGCAGCAACTGTCCAACAGTTTA GCAACGCCACAGAATGCGGAGAAAGACAGCAGACAGTCGTAAGCGTGGAA ACGCCCAGCCGGGAAAACCCACGGAACCTATAAGCCTATTAACTAAATGC ATAATGAAAGTACAGTCAAAACTCCACTCGCAACCTTCGTGTGAAGATCT CCGCATAAGATAACGTGTGAAACTCTCAAGAAAACCACAGCCCAGGCGCA TCTCTTCAACGCTCCTTTTCCCGGGAAACGGAAAACCCGGGAAAACGAGA CCTCGCTTTTGGCTCCAACAGAGTTTAGTTTAAACATTTAATAACAAGAA TACAACAACACAAAACCTAGCATTAGAGCAGCGTAAGCAAGTACACATTA TGATTATTAATTAAACATTACAACTAGGATGATGGCGCTTAAGAATGAAC GGAAGAAAGAAAACTTGGCAAAGCTTTAAACAATTTAATTTTCCTTTAAC GCTTGAAATTACACTGAAGCATATATTTTTGTTTTCCTAATTTTAGTTTT GTTTTGGTTTAAACAACGCAAGAAAAAATGTTACTAATGCAAAGCAAACA GAGATCAGCAATAAAAAAAAATTATAAAAATGCACAGGCACCAAACTGGA ATTACGTTGAATCACCGTTTCCTGCATTACGATTATATGATTTCAATCCA AATGATTTTCCTATTAATTTTAATCAATGAAGAGTTTTCCTATTATTGAT TAGCCACAGCCAATAAACAACAAGAACAACCAACTCAGCAGCACACACAC ATTCAAATTCATTAATTTATATCGAGAGAGTACGTTTAGAGTTTAAGTTC GAGAAAGTTCATTTCCAGGCACTAATTTTCACTCACACCACTCACATAGA AAAACACAAACACCTCATTTTGTAGTTTTCCGAGTCCCTTGGATCGTTTT CCTCTTTTTTAATCGAAATAACGCATAATGCATAATAATTATTACCAGAT ATACACTAAAACCTATAAATATATATTAATATATGTTCTGTGATCTGTAG CATACCTTGTACAAAGTGTTTTTTTTAGCATAATTATGCGATTTTAATTA TGATCCGCAATCGAAATTACACATTTTTGTTCTCATTTCGATGGTAAAAA CACTCTATCATGATGTAAAAAAAAAAAACAAAAGAAAACATTTGATGATG TTGCGAAAAAATATATTATCTAAAACATAAAGAAAAACAAACACTAGCTC TTAATAAATTGCAAAAATTTAAAAAACAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
emc-RA | 2319 | emc-RA | 87..2121 | 1..2035 | 10130 | 99.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 749182..749902 | 1..721 | 99 | == | Plus |
chr3L | 752023..753242 | 806..2027 | 95 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
emc-RA | 1..600 | 243..842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
emc-RA | 1..600 | 243..842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
emc-RA | 1..600 | 243..842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
emc-RA | 1..600 | 243..842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
emc-RA | 1..600 | 243..842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
emc-RA | 17..2043 | 1..2027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
emc-RA | 17..2043 | 1..2027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
emc-RA | 23..2049 | 1..2027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
emc-RA | 17..2043 | 1..2027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
emc-RA | 23..2049 | 1..2027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 749422..750227 | 1..806 | 100 | -> | Plus |
3L | 752272..753492 | 807..2027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 749422..750227 | 1..806 | 100 | -> | Plus |
3L | 752272..753492 | 807..2027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 749422..750227 | 1..806 | 100 | -> | Plus |
3L | 752272..753492 | 807..2027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 749422..750227 | 1..806 | 100 | -> | Plus |
arm_3L | 752272..753492 | 807..2027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 749422..750227 | 1..806 | 100 | -> | Plus |
3L | 752272..753492 | 807..2027 | 99 | Plus |
Translation from 242 to 841
> LD10532.pep MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLV PFMPKNRKLTKLEIIQHVIDYICDLQTELETHPEMGNFDAAAALTAVNGL HEDEDSDMEDADAEAEAEVDPDILAQRLNAEQPAKVSSPAARLPLTDRQT PNTLVAPAHPQQHQQQQQLQLQQQQLQSQQQLSNSLATPQNAEKDSRQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10395-PA | 196 | GF10395-PA | 1..196 | 1..199 | 666 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14734-PA | 201 | GG14734-PA | 1..201 | 1..199 | 1013 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15419-PA | 219 | GH15419-PA | 1..219 | 1..199 | 505 | 58.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
emc-PA | 199 | CG1007-PA | 1..199 | 1..199 | 1017 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13022-PA | 201 | GI13022-PA | 1..201 | 1..199 | 547 | 65.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20711-PA | 193 | GL20711-PA | 1..193 | 1..199 | 627 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10048-PA | 193 | GA10048-PA | 1..193 | 1..199 | 627 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14354-PA | 199 | GM14354-PA | 1..199 | 1..199 | 1023 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13571-PA | 199 | GD13571-PA | 1..199 | 1..199 | 1033 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12114-PA | 206 | GJ12114-PA | 1..206 | 1..199 | 544 | 61.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17519-PA | 236 | GK17519-PA | 1..168 | 1..155 | 499 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\emc-PA | 199 | GE21098-PA | 1..199 | 1..199 | 1027 | 98.5 | Plus |
Translation from 242 to 841
> LD10532.hyp MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLV PFMPKNRKLTKLEIIQHVIDYICDLQTELETHPEMGNFDAAAALTAVNGL HEDEDSDMEDADAEAEAEVDPDILAQRLNAEQPAKVSSPAARLPLTDRQT PNTLVAPAHPQQHQQQQQLQLQQQQLQSQQQLSNSLATPQNAEKDSRQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
emc-PA | 199 | CG1007-PA | 1..199 | 1..199 | 1017 | 100 | Plus |