BDGP Sequence Production Resources |
Search the DGRC for LD10670
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 106 |
Well: | 70 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG17556-RA |
Protein status: | LD10670.pep: gold |
Sequenced Size: | 1196 |
Gene | Date | Evidence |
---|---|---|
CG17556 | 2009-08-18 | Manual selection by Sue Celniker |
1196 bp assembled on 2009-10-23
GenBank Submission: BT100172.1
> LD10670.complete AAATCGCTAGTTAATGATTACAATTGGGAAATTAAATTAAATTGATGAGA TATTTAAGTCCGCCTAAGTGAATATGTCGCTAGATTATGAGAAGATGAGC TGGTCGGATGTACGGGATCAGTTCAGAACGTGGCGCGAGGAGACGGGTCG CCACAGCGAGGAGGTGGTCCAGCTGTGGGTTGCTGTGCTAGAGGACAAGG TGCACAAGACCGGCAACGAGCGGCATCTCATCCTGGAGCAGGTGATCATC GCGGCATTGGATACGGCTCGCTTTGACATCGCCACCAAGTGTACCAAGCA GCTGTCCCTCGAGTTCCCGGGCAGCCTGCGCGTGATGAAGTTCAAAGCGA TGCGCTACGAGGCCCTGGAGCAGTACGATGAGGCCGACGAGGTCCTGGAT GCAATCATTGCTAAGGACGAGACAAATGCCGCGCCCAGGAAGCGCAAGAT TGCCATCCTTAAGGCCCGTGGTCGTCGCCTGGAGGCCATCAAGGAGCTCA ACGAGTATCTGAAGAAGTTTATGTCTGACCAGGAGGCATGGCATGAGCTG TGCAACATGTATCTGGCTGAAGGCGAGTTTGGCAAAGCTGCCTTCTGCAT GGAGGAGGTTTTGCTGCACAATCCGCATAGCCATCTAATACACCAGCGTT TGGCAGAAATACGATACACAATGGGTGGCGTCGAGAATATGGAATCGGCT CGCACTTACTATTCGCAGGCCCTGAAGCTTAATCCGCATAACTTGAGGGC CCTTTATGGCATTTACTTGTGCTGCAACCATTTGGACAACTCTCGAGCCG TGAGCTCCAAACGGAAGGAGCTGCAAAAGTTGAGTCAGTGGGCCCTCGAA CAACTTTTGACTAAACAAACGATTGTACCCTTGGAGGCTGCTTTTGGAAA CCTGGAAATCAAATCGAATTGACCAACATAAGCACTACAAATTTGTGCAA TAGATGCCAGAATGTAATGGTTCCAAATATTTTCAGATGTGGGTTTCCAG TTTCTGTTCTTTAAGCAAGTTACATAGATAAACAATTAAAGAAATAGGAG TAAAAACAATTTTATAGTCAGTGCATCCAAGCAACTGTTTTTGGTGGTCT AGTATTGTTGACGGCATTGAAAAACATTTATTATTGAGGTAGGCAAAAAT AGTCCTGTAATAAATTTAGATTAAACGCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17556-RA | 1341 | CG17556-RA | 90..1211 | 1..1122 | 5445 | 99 | Plus |
CG3678-RA | 1077 | CG3678-RA | 28..1077 | 1..1050 | 5085 | 98.9 | Plus |
CG17556-RA | 1341 | CG17556-RA | 1223..1282 | 1121..1180 | 300 | 100 | Plus |
CG31274-RB | 1496 | CG31274-RB | 1389..1448 | 1180..1121 | 300 | 100 | Minus |
CG31274-RB | 1496 | CG31274-RB | 1460..1496 | 1122..1086 | 185 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 12814820..12815325 | 1178..673 | 2515 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 12819028..12819546 | 1178..673 | 2200 | 95.4 | Minus |
chr3R | 27901430 | chr3R | 12819889..12820300 | 518..107 | 2045 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 12815668..12816079 | 518..107 | 2000 | 99 | Minus |
chr3R | 27901430 | chr3R | 12815386..12815543 | 674..517 | 790 | 100 | Minus |
chr3R | 27901430 | chr3R | 12819607..12819764 | 674..517 | 790 | 100 | Minus |
chr3R | 27901430 | chr3R | 12820412..12820518 | 107..1 | 535 | 100 | Minus |
chr3R | 27901430 | chr3R | 12816220..12816326 | 107..1 | 430 | 93.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 16990332..16990839 | 1180..673 | 2540 | 100 | Minus |
3R | 32079331 | 3R | 16994540..16995060 | 1180..673 | 2210 | 95.4 | Minus |
3R | 32079331 | 3R | 16995403..16995814 | 518..107 | 2060 | 100 | Minus |
3R | 32079331 | 3R | 16991182..16991593 | 518..107 | 2000 | 99 | Minus |
3R | 32079331 | 3R | 16990900..16991057 | 674..517 | 790 | 100 | Minus |
3R | 32079331 | 3R | 16995121..16995278 | 674..517 | 790 | 100 | Minus |
3R | 32079331 | 3R | 16995926..16996032 | 107..1 | 535 | 100 | Minus |
3R | 32079331 | 3R | 16991734..16991840 | 107..1 | 430 | 93.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 16731163..16731670 | 1180..673 | 2540 | 100 | Minus |
3R | 31820162 | 3R | 16735442..16735891 | 1122..673 | 2085 | 97.5 | Minus |
3R | 31820162 | 3R | 16736234..16736645 | 518..107 | 2060 | 100 | Minus |
3R | 31820162 | 3R | 16732013..16732424 | 518..107 | 2000 | 99 | Minus |
3R | 31820162 | 3R | 16735952..16736109 | 674..517 | 790 | 100 | Minus |
3R | 31820162 | 3R | 16731731..16731888 | 674..517 | 790 | 100 | Minus |
3R | 31820162 | 3R | 16736757..16736863 | 107..1 | 535 | 100 | Minus |
3R | 31820162 | 3R | 16732565..16732671 | 107..1 | 430 | 93.4 | Minus |
3R | 31820162 | 3R | 16735371..16735430 | 1180..1121 | 300 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 12814820..12815324 | 674..1178 | 99 | <- | Minus |
chr3R | 12815387..12815543 | 517..673 | 100 | <- | Minus |
chr3R | 12819891..12820299 | 108..516 | 99 | <- | Minus |
chr3R | 12820412..12820518 | 1..107 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3678-RA | 1..849 | 74..922 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3678-RA | 1..849 | 74..922 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3678-RA | 1..849 | 74..922 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3678-RA | 1..849 | 74..922 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17556-RA | 57..1178 | 1..1122 | 99 | <- | Plus |
CG17556-RA | 1192..1247 | 1123..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17556-RA | 57..1178 | 1..1122 | 99 | <- | Plus |
CG17556-RA | 1192..1247 | 1123..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3678-RB | 39..1216 | 1..1178 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3678-RB | 39..1216 | 1..1178 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16990334..16990838 | 674..1178 | 100 | <- | Minus |
3R | 16990901..16991057 | 517..673 | 100 | <- | Minus |
3R | 16995405..16995813 | 108..516 | 100 | <- | Minus |
3R | 16995926..16996032 | 1..107 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16990334..16990838 | 674..1178 | 100 | <- | Minus |
3R | 16990901..16991057 | 517..673 | 100 | <- | Minus |
3R | 16995405..16995813 | 108..516 | 100 | <- | Minus |
3R | 16995926..16996032 | 1..107 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16990334..16990838 | 674..1178 | 100 | <- | Minus |
3R | 16990901..16991057 | 517..673 | 100 | <- | Minus |
3R | 16995405..16995813 | 108..516 | 100 | <- | Minus |
3R | 16995926..16996032 | 1..107 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 12816056..12816560 | 674..1178 | 100 | <- | Minus |
arm_3R | 12816623..12816779 | 517..673 | 100 | <- | Minus |
arm_3R | 12821127..12821535 | 108..516 | 100 | <- | Minus |
arm_3R | 12821648..12821754 | 1..107 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16731165..16731669 | 674..1178 | 100 | <- | Minus |
3R | 16731732..16731888 | 517..673 | 100 | <- | Minus |
3R | 16736236..16736644 | 108..516 | 100 | <- | Minus |
3R | 16736757..16736863 | 1..107 | 100 | Minus |
Translation from 73 to 921
> LD10670.pep MSLDYEKMSWSDVRDQFRTWREETGRHSEEVVQLWVAVLEDKVHKTGNER HLILEQVIIAALDTARFDIATKCTKQLSLEFPGSLRVMKFKAMRYEALEQ YDEADEVLDAIIAKDETNAAPRKRKIAILKARGRRLEAIKELNEYLKKFM SDQEAWHELCNMYLAEGEFGKAAFCMEEVLLHNPHSHLIHQRLAEIRYTM GGVENMESARTYYSQALKLNPHNLRALYGIYLCCNHLDNSRAVSSKRKEL QKLSQWALEQLLTKQTIVPLEAAFGNLEIKSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17917-PA | 293 | GF17917-PA | 1..293 | 1..282 | 1350 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16802-PA | 282 | GG16802-PA | 1..282 | 1..282 | 1480 | 97.5 | Plus |
Dere\GG16801-PA | 282 | GG16801-PA | 1..282 | 1..282 | 1480 | 97.5 | Plus |
Dere\GG11068-PA | 159 | GG11068-PA | 1..159 | 1..159 | 826 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18069-PA | 293 | GH18069-PA | 1..293 | 1..282 | 1261 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17556-PB | 282 | CG17556-PB | 1..282 | 1..282 | 1459 | 100 | Plus |
CG17556-PA | 282 | CG17556-PA | 1..282 | 1..282 | 1459 | 100 | Plus |
CG3678-PB | 282 | CG3678-PB | 1..282 | 1..282 | 1456 | 99.6 | Plus |
CG3678-PA | 282 | CG3678-PA | 1..282 | 1..282 | 1456 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23748-PA | 293 | GI23748-PA | 1..293 | 1..282 | 1294 | 82.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22995-PA | 293 | GL22995-PA | 1..293 | 1..282 | 1348 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14552-PA | 293 | GA14552-PA | 1..293 | 1..282 | 1348 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15395-PA | 282 | GM15395-PA | 1..282 | 1..282 | 1485 | 97.9 | Plus |
Dsec\GM24122-PA | 278 | GM24122-PA | 8..278 | 12..282 | 1426 | 98.2 | Plus |
Dsec\GM22065-PA | 120 | GM22065-PA | 2..120 | 30..148 | 603 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20261-PA | 282 | GD20261-PA | 1..282 | 1..282 | 1496 | 98.6 | Plus |
Dsim\GD20260-PA | 282 | GD20260-PA | 1..282 | 1..282 | 1495 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10594-PA | 293 | GJ10594-PA | 1..293 | 1..282 | 1282 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12757-PA | 293 | GK12757-PA | 1..293 | 1..282 | 1275 | 81.9 | Plus |
Translation from 73 to 921
> LD10670.hyp MSLDYEKMSWSDVRDQFRTWREETGRHSEEVVQLWVAVLEDKVHKTGNER HLILEQVIIAALDTARFDIATKCTKQLSLEFPGSLRVMKFKAMRYEALEQ YDEADEVLDAIIAKDETNAAPRKRKIAILKARGRRLEAIKELNEYLKKFM SDQEAWHELCNMYLAEGEFGKAAFCMEEVLLHNPHSHLIHQRLAEIRYTM GGVENMESARTYYSQALKLNPHNLRALYGIYLCCNHLDNSRAVSSKRKEL QKLSQWALEQLLTKQTIVPLEAAFGNLEIKSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17556-PB | 282 | CG17556-PB | 1..282 | 1..282 | 1459 | 100 | Plus |
CG17556-PA | 282 | CG17556-PA | 1..282 | 1..282 | 1459 | 100 | Plus |
CG3678-PB | 282 | CG3678-PB | 1..282 | 1..282 | 1456 | 99.6 | Plus |
CG3678-PA | 282 | CG3678-PA | 1..282 | 1..282 | 1456 | 99.6 | Plus |