BDGP Sequence Production Resources |
Search the DGRC for LD10773
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 107 |
Well: | 73 |
Vector: | pBS SK- |
Associated Gene/Transcript | Ns4-RA |
Protein status: | LD10773.pep: gold |
Preliminary Size: | 1939 |
Sequenced Size: | 1963 |
Gene | Date | Evidence |
---|---|---|
CG9320 | 2001-01-01 | Release 2 assignment |
CG9320 | 2002-05-31 | Blastp of sequenced clone |
CG9320 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9320 | 2008-04-29 | Release 5.5 accounting |
CG9320 | 2008-08-15 | Release 5.9 accounting |
CG9320 | 2008-12-18 | 5.12 accounting |
1963 bp (1963 high quality bases) assembled on 2002-05-31
GenBank Submission: AY118506
> LD10773.complete AACAACATTCAATCCCAATTAACTACAACTAACAGTTGGCCACCGCTGCT GGACGAAACCAAATTGACCGGGAGTGAGACCAGGACGTGACCCAAAAACG ATGCCACAGCAACGGCGCAAGGTGGCCTTTAGCGGCAAGAAGAAGAAGGA CCAGATGTTGCAAAAGCGCAACACAAAAGGTCCCCCAAAGTATCTGAGGA GCACGCAGGAGTCGTATGAGGACAGCGATGTGCCGGAAACGACCAGGAAA CTCATGGAGCAGCCTTTTGCGCGCGGCGGAAACCGAAACAAGAACGTCAA TCGCTATAATTTGCAATTCTACCAGGAGGGCAAAAAGGAACTGGAGCAAA TGAAACAAGAGGGCTTTAAACCGTTCGAGAAACTCAGTCCCGCTCAGCGG GAAGTGGACGACCGATACTTTGCCGGCTGCGACTTCCCAGTTCGTCCACC TTGGACGCTAACGGAGTCCAAGGAAGAGCTTGATCGCACCGAGAATCGCT ACTTTAAGGAATACGTGGACGAGCTGCAGAAAAAGCAGCGTGCTGGAGAT TCGAAGGAGCTTTCGCTGTTTGAGCTGAATCTGGAAACCTGGCGTCAGCT ATGGCGTGTCCTGGAGTTCTCGGACATCCTGCTGATCATTGTGGACGTGC GCTATGCCACGCTGATGTTTCCACCCTCCCTGTACGACTATATTATCAAC ACGCTAAAGAAACATGCGATAGTGGTGTTCAACAAGGTGGATCTAGTCGA ACCGCATGCGGTGGTGGCTTGGAGGCAATACTTCCGCGACCGTTACCCCC AGCTACCAGTGGTGCTCTTTGCATCCTTCCTCCCCCGATCCCGCAAAGGA AGTCAACGTGGTCCACAGGCTCATCGCAGGAGTATGGAAGGAGTGTATAA TATCTACAAGGAATGCCAGCGCTATGTCCAAGGAGAGGTGGATCTAACAA CCTGGGAGCAGAAGATACGAGAGGACATGCGTAGTGATCAGCTTGACATC CTGGATGAAATATCAACGGCCGTGGAGGGTGAACTCAAGATCAGCAGCAG CATCGACACCACGCCCCACGAGCACGTTAAATATCACAGTGGGGTCCTGA CCATTGGCTGCATTGGATTTCCCAATGTCGGAAAGTCGTCGCTGATCAAT GCCTTAAAGGGACGCAAGGTGGTCAGCGTTAGTCGCACGCCCGGACATAC GAAGCACTTTCAGACAATTTTCCTCACCCCACTTGTTCGCCTCTGTGATT GTCCCGGTCTAGTCTTTCCCTCGAGTACTCCCAAAAGCCTGCAAGTGCTG CTGGGCAGTTTCCCCATATCGCAACTGGCTGTTCCATACCGCTCCCTGAA GTTTCTCGGCGAACATCTGAATCTACCACAGCTTCTGCGTCTCCACCTGC CCGAGGATTACGATGAGTGGTCTGCGGTGGCCATCTCCGATGCTTGGGCA TATAAGAGGGGATTCCTCACCGCCAAGGCAGCCAGGCCGGATCGCTACCG GGCCGCGAATCATATCCTTCGCATGTGCCTGGCCGGCCAACAGATGTTGG TATTGCAGTTTTATCCGCCCGGATTTGAGGAGCGACGTGAGCACTGGCTC CAACATCCCGATGTGGGGGAGGTCAAGAAGTACCAGCAAGTCGAATTAGA TGAGCCGGAGAGCGAGACCAACGGCGACACATCATCCGTCTGCTCGGATA CTGCCGACAGCGAGGATGAAGACGAGGACAGCTCCAATGACGAGACCAAT GCTGATGAGGAGGAATGTGGCATCAGGGAAGACGCACCCAGGTCTCGGAA CGTGTTTGCTCTGCTGGAGGACGATTAAAAGTTGCATTTACTGATTTTGT TATTGCATCACTAGTTTACACCTATAATTTATTATTACGCTATACAATGT TTTGCTAACAATAAACTACAACACCAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 20751687..20752880 | 507..1700 | 5940 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 20751294..20751625 | 178..509 | 1660 | 100 | Plus |
chr2L | 23010047 | chr2L | 20752946..20753170 | 1701..1925 | 1110 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 20751027..20751207 | 1..181 | 905 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20753172..20754365 | 507..1700 | 5970 | 100 | Plus |
2L | 23513712 | 2L | 20752779..20753110 | 178..509 | 1660 | 100 | Plus |
2L | 23513712 | 2L | 20754431..20754657 | 1701..1927 | 1135 | 100 | Plus |
2L | 23513712 | 2L | 20752512..20752692 | 1..181 | 905 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20753172..20754365 | 507..1700 | 5970 | 100 | Plus |
2L | 23513712 | 2L | 20752779..20753110 | 178..509 | 1660 | 100 | Plus |
2L | 23513712 | 2L | 20754431..20754657 | 1701..1927 | 1135 | 100 | Plus |
2L | 23513712 | 2L | 20752512..20752692 | 1..181 | 905 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 20751027..20751205 | 1..179 | 100 | -> | Plus |
chr2L | 20751296..20751624 | 180..508 | 100 | -> | Plus |
chr2L | 20751689..20752880 | 509..1700 | 99 | -> | Plus |
chr2L | 20752946..20753170 | 1701..1925 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9320-RA | 1..1728 | 101..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ns4-RA | 1..1728 | 101..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ns4-RA | 1..1728 | 101..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9320-RA | 1..1728 | 101..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ns4-RA | 1..1728 | 101..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9320-RA | 113..2037 | 1..1925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ns4-RA | 113..2037 | 1..1925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ns4-RA | 37..1961 | 1..1925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9320-RA | 113..2037 | 1..1925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ns4-RA | 37..1961 | 1..1925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20754431..20754655 | 1701..1925 | 100 | Plus | |
2L | 20753174..20754365 | 509..1700 | 100 | -> | Plus |
2L | 20752512..20752690 | 1..179 | 100 | -> | Plus |
2L | 20752781..20753109 | 180..508 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20754431..20754655 | 1701..1925 | 100 | Plus | |
2L | 20753174..20754365 | 509..1700 | 100 | -> | Plus |
2L | 20752512..20752690 | 1..179 | 100 | -> | Plus |
2L | 20752781..20753109 | 180..508 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20754431..20754655 | 1701..1925 | 100 | Plus | |
2L | 20753174..20754365 | 509..1700 | 100 | -> | Plus |
2L | 20752512..20752690 | 1..179 | 100 | -> | Plus |
2L | 20752781..20753109 | 180..508 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 20752512..20752690 | 1..179 | 100 | -> | Plus |
arm_2L | 20752781..20753109 | 180..508 | 100 | -> | Plus |
arm_2L | 20753174..20754365 | 509..1700 | 100 | -> | Plus |
arm_2L | 20754431..20754655 | 1701..1925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20752781..20753109 | 180..508 | 100 | -> | Plus |
2L | 20753174..20754365 | 509..1700 | 100 | -> | Plus |
2L | 20754431..20754655 | 1701..1925 | 100 | Plus | |
2L | 20752512..20752690 | 1..179 | 100 | -> | Plus |
Translation from 100 to 1827
> LD10773.hyp MPQQRRKVAFSGKKKKDQMLQKRNTKGPPKYLRSTQESYEDSDVPETTRK LMEQPFARGGNRNKNVNRYNLQFYQEGKKELEQMKQEGFKPFEKLSPAQR EVDDRYFAGCDFPVRPPWTLTESKEELDRTENRYFKEYVDELQKKQRAGD SKELSLFELNLETWRQLWRVLEFSDILLIIVDVRYATLMFPPSLYDYIIN TLKKHAIVVFNKVDLVEPHAVVAWRQYFRDRYPQLPVVLFASFLPRSRKG SQRGPQAHRRSMEGVYNIYKECQRYVQGEVDLTTWEQKIREDMRSDQLDI LDEISTAVEGELKISSSIDTTPHEHVKYHSGVLTIGCIGFPNVGKSSLIN ALKGRKVVSVSRTPGHTKHFQTIFLTPLVRLCDCPGLVFPSSTPKSLQVL LGSFPISQLAVPYRSLKFLGEHLNLPQLLRLHLPEDYDEWSAVAISDAWA YKRGFLTAKAARPDRYRAANHILRMCLAGQQMLVLQFYPPGFEERREHWL QHPDVGEVKKYQQVELDEPESETNGDTSSVCSDTADSEDEDEDSSNDETN ADEEECGIREDAPRSRNVFALLEDD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ns4-PA | 575 | CG9320-PA | 1..575 | 1..575 | 3034 | 100 | Plus |
Ns3-PB | 606 | CG14788-PB | 115..510 | 113..498 | 392 | 32.4 | Plus |
Ns3-PA | 606 | CG14788-PA | 115..510 | 113..498 | 392 | 32.4 | Plus |
Ns1-PA | 581 | CG3983-PA | 121..424 | 140..494 | 177 | 24.2 | Plus |
Ns2-PA | 674 | CG6501-PA | 316..509 | 333..540 | 174 | 28.1 | Plus |
Translation from 100 to 1827
> LD10773.pep MPQQRRKVAFSGKKKKDQMLQKRNTKGPPKYLRSTQESYEDSDVPETTRK LMEQPFARGGNRNKNVNRYNLQFYQEGKKELEQMKQEGFKPFEKLSPAQR EVDDRYFAGCDFPVRPPWTLTESKEELDRTENRYFKEYVDELQKKQRAGD SKELSLFELNLETWRQLWRVLEFSDILLIIVDVRYATLMFPPSLYDYIIN TLKKHAIVVFNKVDLVEPHAVVAWRQYFRDRYPQLPVVLFASFLPRSRKG SQRGPQAHRRSMEGVYNIYKECQRYVQGEVDLTTWEQKIREDMRSDQLDI LDEISTAVEGELKISSSIDTTPHEHVKYHSGVLTIGCIGFPNVGKSSLIN ALKGRKVVSVSRTPGHTKHFQTIFLTPLVRLCDCPGLVFPSSTPKSLQVL LGSFPISQLAVPYRSLKFLGEHLNLPQLLRLHLPEDYDEWSAVAISDAWA YKRGFLTAKAARPDRYRAANHILRMCLAGQQMLVLQFYPPGFEERREHWL QHPDVGEVKKYQQVELDEPESETNGDTSSVCSDTADSEDEDEDSSNDETN ADEEECGIREDAPRSRNVFALLEDD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15352-PA | 575 | GF15352-PA | 1..575 | 1..575 | 2771 | 90.8 | Plus |
Dana\GF21278-PA | 605 | GF21278-PA | 114..509 | 112..498 | 403 | 32.9 | Plus |
Dana\GF17911-PA | 581 | GF17911-PA | 120..347 | 140..413 | 201 | 25.1 | Plus |
Dana\GF13248-PA | 676 | GF13248-PA | 316..470 | 333..492 | 196 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21249-PA | 575 | GG21249-PA | 1..575 | 1..575 | 3023 | 97.6 | Plus |
Dere\GG12698-PA | 607 | GG12698-PA | 106..511 | 104..498 | 381 | 31.5 | Plus |
Dere\GG16794-PA | 581 | GG16794-PA | 121..424 | 140..494 | 196 | 23.9 | Plus |
Dere\GG21043-PA | 674 | GG21043-PA | 316..470 | 333..492 | 187 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10880-PA | 570 | GH10880-PA | 1..570 | 1..575 | 2143 | 76.6 | Plus |
Dgri\GH11875-PA | 611 | GH11875-PA | 113..516 | 112..498 | 376 | 31.8 | Plus |
Dgri\GH18066-PA | 581 | GH18066-PA | 118..457 | 137..517 | 211 | 23.7 | Plus |
Dgri\GH20960-PA | 682 | GH20960-PA | 316..476 | 333..498 | 198 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ns4-PA | 575 | CG9320-PA | 1..575 | 1..575 | 3034 | 100 | Plus |
Ns3-PB | 606 | CG14788-PB | 115..510 | 113..498 | 392 | 32.4 | Plus |
Ns3-PA | 606 | CG14788-PA | 115..510 | 113..498 | 392 | 32.4 | Plus |
Ns1-PA | 581 | CG3983-PA | 121..424 | 140..494 | 177 | 24.2 | Plus |
Ns2-PA | 674 | CG6501-PA | 316..509 | 333..540 | 174 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18253-PA | 574 | GI18253-PA | 1..574 | 1..575 | 2238 | 73.1 | Plus |
Dmoj\GI15663-PA | 613 | GI15663-PA | 113..518 | 112..498 | 384 | 31.1 | Plus |
Dmoj\GI21297-PA | 678 | GI21297-PA | 316..470 | 333..492 | 197 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18517-PA | 577 | GL18517-PA | 1..577 | 1..575 | 2758 | 90.1 | Plus |
Dper\GL14378-PA | 602 | GL14378-PA | 115..506 | 113..498 | 395 | 31.7 | Plus |
Dper\GL21923-PA | 583 | GL21923-PA | 120..348 | 139..413 | 199 | 26.9 | Plus |
Dper\GL10621-PA | 676 | GL10621-PA | 316..470 | 333..492 | 191 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21698-PA | 577 | GA21698-PA | 1..577 | 1..575 | 2758 | 90.1 | Plus |
Dpse\GA13246-PA | 602 | GA13246-PA | 115..506 | 113..498 | 396 | 31.7 | Plus |
Dpse\GA26447-PA | 583 | GA26447-PA | 120..348 | 139..413 | 199 | 26.8 | Plus |
Dpse\GA19643-PA | 676 | GA19643-PA | 316..470 | 333..492 | 191 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23366-PA | 575 | GM23366-PA | 1..575 | 1..575 | 3046 | 97.9 | Plus |
Dsec\GM18974-PA | 607 | GM18974-PA | 114..511 | 112..498 | 397 | 32 | Plus |
Dsec\GM15388-PA | 581 | GM15388-PA | 121..424 | 140..494 | 197 | 23.9 | Plus |
Dsec\GM19971-PA | 674 | GM19971-PA | 316..470 | 333..492 | 187 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24278-PA | 575 | GD24278-PA | 1..575 | 1..575 | 3069 | 98.8 | Plus |
Dsim\GD25465-PA | 674 | GD25465-PA | 316..470 | 333..492 | 191 | 34 | Plus |
Dsim\GD20254-PA | 328 | GD20254-PA | 15..171 | 333..494 | 170 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17511-PA | 576 | GJ17511-PA | 1..576 | 1..575 | 2234 | 76.6 | Plus |
Dvir\GJ19196-PA | 611 | GJ19196-PA | 113..516 | 112..498 | 369 | 31.9 | Plus |
Dvir\GJ20899-PA | 682 | GJ20899-PA | 316..470 | 333..492 | 193 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14912-PA | 576 | GK14912-PA | 1..576 | 1..575 | 2554 | 86.5 | Plus |
Dwil\GK10107-PA | 610 | GK10107-PA | 114..511 | 112..498 | 386 | 31.3 | Plus |
Dwil\GK21401-PA | 681 | GK21401-PA | 316..490 | 333..513 | 202 | 32.8 | Plus |
Dwil\GK13906-PA | 579 | GK13906-PA | 142..458 | 164..517 | 181 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12344-PA | 575 | GE12344-PA | 1..575 | 1..575 | 3001 | 96.5 | Plus |
Dyak\GE16528-PA | 572 | GE16528-PA | 106..476 | 104..498 | 382 | 30.4 | Plus |
Dyak\GE26110-PA | 581 | GE26110-PA | 121..348 | 140..413 | 196 | 25.1 | Plus |
Dyak\GE13986-PA | 674 | GE13986-PA | 316..470 | 333..492 | 186 | 33.9 | Plus |