BDGP Sequence Production Resources |
Search the DGRC for LD10783
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 107 |
Well: | 83 |
Vector: | pBS SK- |
Associated Gene/Transcript | ScpX-RA |
Protein status: | LD10783.pep: gold |
Preliminary Size: | 1943 |
Sequenced Size: | 1916 |
Gene | Date | Evidence |
---|---|---|
CG17320 | 2001-01-01 | Release 2 assignment |
CG17320 | 2001-11-09 | Blastp of sequenced clone |
CG17320 | 2003-01-01 | Sim4 clustering to Release 3 |
ScpX | 2008-04-29 | Release 5.5 accounting |
ScpX | 2008-08-15 | Release 5.9 accounting |
ScpX | 2008-12-18 | 5.12 accounting |
1916 bp (1916 high quality bases) assembled on 2001-11-09
GenBank Submission: AY089539
> LD10783.complete AAGGCTTAAGCCTCCTAATATCGCCAACAATCGCCATTCATTTTAACATT TAGTTAATTGCTCTTGAGCACTAGTTGTGGTATTACCTGTTTTACTCGCG ATCCTGTAGCTGCAAAATGTCGAAGACCCGTGTGTACGTTGTCGGTGTGG GCATGACCAAGTTCGAGAAGCCCGGTCGCCAAGCTGATGTGTGCTACCCG GATTTCGCTAGGGAGGCCATCACAAAAGCTCTCCAGGATGCGGGCATCAA GTACGAGGAAGTGCAGCAGGCGGTGGCCGGCTACGTTTATGGAGACTCCA CCTGCGGACAGCGGGCCATCTACGAGGTCGGAATGACCGGCATTCCGGTC TATAACGTCAACAACAACTGCTCCACGGGATCCAGTGCTTTGTATTTGGC CAAGCAGATCGTGGAGAGCGGAAACGCAGATTGCGTCCTGGCTTTGGGAT TTGAAAAGATGGAGCGTGGATCCCTGTCCTCCAAGTACTTTGATCGCGCC AATCCCATGGAGCGTCACATCACCGAGATGGGTGAGCTGGCCGAGATCGG AGCTGGCCCAATGGCTGCCCAGATCTTCGGCAATGCCGGCAAAGAGCACA TGAAGAAGTATGGCACTAAGCCCGAGCATTTCGGCAAGATCGCTTGGAAG AACCACAAGCACTCCGTCAATAATCCCTACTCGCAGTTCCGCGATGAATA CACCCTGGAGCAGATTATGAAGTCGCCCCAGGTTGTGGAGGGAGTGCTGA CCAAGCTGCAGTGTTGTCCCACTTCCGATGGATCTGGAGCTGCCATTCTC GCCTCCGAGGCCTTCGTGCGTCGCCACGGATTGGAAAAGCAGGCTGTCGA AATTGTAGGCATGGAGATGGCCAGTGACCCGGCGTCCACCTTTGCCGACA AGAGCTTGATGAAGATTGCTGGAACCGATATGACCCGTCTGGCCACCCAG CGTCTGTTCGCAAAGAGTGGGTACAAGCCCCAGGATGTCCAGGTTGTGGA ACTGCACGATTGCTTCTCGGCCAACGAGTTGATCACGTATGAGGCACTTG GACTGTGTGGAGAGGGCAACGCCGGCGAGTTCATCGACGCTGGAGACAAC ACCTACGGTGGCAAGTTCGTGGTCAACCCCAGTGGTGGTCTGATCTCGAA GGGCCATCCTCTGGGCGCCACGGGTCTGGCACAATGTGCTGAGCTCTGCT GGCAGCTCCGTGGATTGGCTGAGAAGCGCCAGGTGCCCAATGCTCAGTTG GCTTTGCAGCACAATCTGGGACTGGGTGGTGCCGTTGTGGTTGCCTTGTA TCGTCTGGGTTTCCCAGCTGCCAACAGCGTGGTTCGCAATCTGACCGCTG CGGGCAAGGCTGCTACCAGTGAGGATGGCTTTAAGGTTGCGCCCCTGCTG AAACTATTGGAGCAGGCCATGCAGGAGGATAAGGACAATCTGATCGAAAA GGTGCGCGCCATTTACGGCTTTAAGGTCAACAACGGACCCAATGGACAGA CCGGTTTCTGGGTAATTGATGCCAAGCAGGGCAAGGGAAAGATCATCTTC AATGGAACACAAAAATGTGACGTTACCTTTATCATTAGCGACGATGATGT CTTTGAGCTGCTAACAGGAAAGCTGCCACCACAGAAGGCCTTTTTCCAGG GCAAGATCAAGATCCAGGGCAACATGGGCTTTGCCATGAAACTGATGGAC CTGCAGCGATCCGCCCAAGGCAGGATCGAGGAGCTGCGCTCCAAGCTATA GGCTCCTCTTCTTGTGCAATGCAGCATCTTGGTGGCTTTGGATCTGTTAA ACCTAGTTATATGAATATATCCAGCATACGCTTTTTATACGACTTTTGTA TTATTTCTCTAGATTAAACTGTTATTTTCGTAATCGAAAAAAAAAAAAAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ScpX-RA | 2027 | ScpX-RA | 42..1930 | 1..1889 | 9430 | 99.9 | Plus |
ScpX.d | 2615 | ScpX.d | 42..1930 | 1..1889 | 9430 | 99.9 | Plus |
ScpX.a | 1899 | ScpX.a | 175..1899 | 162..1886 | 8610 | 99.9 | Plus |
ScpX.a | 1899 | ScpX.a | 42..174 | 1..133 | 665 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 18831115..18831998 | 677..1560 | 4390 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 18827852..18828490 | 1315..677 | 3030 | 98.3 | Minus |
chr2L | 23010047 | chr2L | 18830475..18830800 | 160..485 | 1615 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 18832061..18832386 | 1561..1886 | 1615 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 18828897..18829216 | 479..160 | 1240 | 92.5 | Minus |
chr2L | 23010047 | chr2L | 18830858..18831050 | 484..676 | 950 | 99.5 | Plus |
chr2L | 23010047 | chr2L | 18828641..18828833 | 676..484 | 845 | 95.9 | Minus |
chr2L | 23010047 | chr2L | 18829980..18830140 | 1..161 | 805 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18832361..18833244 | 677..1560 | 4420 | 100 | Plus |
2L | 23513712 | 2L | 18829098..18829736 | 1315..677 | 3045 | 98.4 | Minus |
2L | 23513712 | 2L | 18833305..18833633 | 1561..1889 | 1645 | 100 | Plus |
2L | 23513712 | 2L | 18831721..18832046 | 160..485 | 1630 | 100 | Plus |
2L | 23513712 | 2L | 18830143..18830462 | 479..160 | 1240 | 92.5 | Minus |
2L | 23513712 | 2L | 18832104..18832296 | 484..676 | 950 | 99.5 | Plus |
2L | 23513712 | 2L | 18829887..18830079 | 676..484 | 845 | 95.9 | Minus |
2L | 23513712 | 2L | 18831226..18831386 | 1..161 | 805 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18832361..18833244 | 677..1560 | 4420 | 100 | Plus |
2L | 23513712 | 2L | 18829098..18829736 | 1315..677 | 3045 | 98.4 | Minus |
2L | 23513712 | 2L | 18833305..18833633 | 1561..1889 | 1645 | 100 | Plus |
2L | 23513712 | 2L | 18831721..18832046 | 160..485 | 1630 | 100 | Plus |
2L | 23513712 | 2L | 18830143..18830462 | 479..160 | 1240 | 92.5 | Minus |
2L | 23513712 | 2L | 18832104..18832296 | 484..676 | 950 | 99.4 | Plus |
2L | 23513712 | 2L | 18829887..18830079 | 676..484 | 845 | 95.8 | Minus |
2L | 23513712 | 2L | 18831226..18831386 | 1..161 | 805 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 18829980..18830140 | 1..161 | 100 | -> | Plus |
chr2L | 18830477..18830800 | 162..485 | 99 | -> | Plus |
chr2L | 18830860..18831050 | 486..676 | 99 | -> | Plus |
chr2L | 18831115..18831998 | 677..1560 | 99 | -> | Plus |
chr2L | 18832061..18832386 | 1561..1886 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ScpX-RA | 1..1635 | 117..1751 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ScpX-RA | 1..1635 | 117..1751 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ScpX-RA | 1..1635 | 117..1751 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ScpX-RA | 1..1635 | 117..1751 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ScpX-RA | 1..1635 | 117..1751 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ScpX-RA | 42..1927 | 1..1886 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ScpX-RA | 42..1927 | 1..1886 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ScpX-RA | 1..1883 | 4..1886 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ScpX-RA | 11..1896 | 1..1886 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ScpX-RA | 1..1883 | 4..1886 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18832106..18832296 | 486..676 | 99 | -> | Plus |
2L | 18831226..18831386 | 1..161 | 100 | -> | Plus |
2L | 18833305..18833630 | 1561..1886 | 100 | Plus | |
2L | 18831723..18832046 | 162..485 | 100 | -> | Plus |
2L | 18832361..18833244 | 677..1560 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18832106..18832296 | 486..676 | 99 | -> | Plus |
2L | 18831226..18831386 | 1..161 | 100 | -> | Plus |
2L | 18833305..18833630 | 1561..1886 | 100 | Plus | |
2L | 18831723..18832046 | 162..485 | 100 | -> | Plus |
2L | 18832361..18833244 | 677..1560 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18832106..18832296 | 486..676 | 99 | -> | Plus |
2L | 18831226..18831386 | 1..161 | 100 | -> | Plus |
2L | 18833305..18833630 | 1561..1886 | 100 | Plus | |
2L | 18831723..18832046 | 162..485 | 100 | -> | Plus |
2L | 18832361..18833244 | 677..1560 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 18831226..18831386 | 1..161 | 100 | -> | Plus |
arm_2L | 18831723..18832046 | 162..485 | 100 | -> | Plus |
arm_2L | 18832106..18832296 | 486..676 | 99 | -> | Plus |
arm_2L | 18832361..18833244 | 677..1560 | 100 | -> | Plus |
arm_2L | 18833305..18833630 | 1561..1886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18831723..18832046 | 162..485 | 100 | -> | Plus |
2L | 18832106..18832296 | 486..676 | 99 | -> | Plus |
2L | 18832361..18833244 | 677..1560 | 100 | -> | Plus |
2L | 18833305..18833630 | 1561..1886 | 100 | Plus | |
2L | 18831226..18831386 | 1..161 | 100 | -> | Plus |
Translation from 116 to 1750
> LD10783.hyp MSKTRVYVVGVGMTKFEKPGRQADVCYPDFAREAITKALQDAGIKYEEVQ QAVAGYVYGDSTCGQRAIYEVGMTGIPVYNVNNNCSTGSSALYLAKQIVE SGNADCVLALGFEKMERGSLSSKYFDRANPMERHITEMGELAEIGAGPMA AQIFGNAGKEHMKKYGTKPEHFGKIAWKNHKHSVNNPYSQFRDEYTLEQI MKSPQVVEGVLTKLQCCPTSDGSGAAILASEAFVRRHGLEKQAVEIVGME MASDPASTFADKSLMKIAGTDMTRLATQRLFAKSGYKPQDVQVVELHDCF SANELITYEALGLCGEGNAGEFIDAGDNTYGGKFVVNPSGGLISKGHPLG ATGLAQCAELCWQLRGLAEKRQVPNAQLALQHNLGLGGAVVVALYRLGFP AANSVVRNLTAAGKAATSEDGFKVAPLLKLLEQAMQEDKDNLIEKVRAIY GFKVNNGPNGQTGFWVIDAKQGKGKIIFNGTQKCDVTFIISDDDVFELLT GKLPPQKAFFQGKIKIQGNMGFAMKLMDLQRSAQGRIEELRSKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ScpX-PA | 544 | CG17320-PA | 1..544 | 1..544 | 2821 | 100 | Plus |
CG17597-PB | 407 | CG17597-PB | 1..402 | 1..402 | 2046 | 96.5 | Plus |
CG17597-PA | 407 | CG17597-PA | 1..402 | 1..402 | 2046 | 96.5 | Plus |
Translation from 116 to 1750
> LD10783.pep MSKTRVYVVGVGMTKFEKPGRQADVCYPDFAREAITKALQDAGIKYEEVQ QAVAGYVYGDSTCGQRAIYEVGMTGIPVYNVNNNCSTGSSALYLAKQIVE SGNADCVLALGFEKMERGSLSSKYFDRANPMERHITEMGELAEIGAGPMA AQIFGNAGKEHMKKYGTKPEHFGKIAWKNHKHSVNNPYSQFRDEYTLEQI MKSPQVVEGVLTKLQCCPTSDGSGAAILASEAFVRRHGLEKQAVEIVGME MASDPASTFADKSLMKIAGTDMTRLATQRLFAKSGYKPQDVQVVELHDCF SANELITYEALGLCGEGNAGEFIDAGDNTYGGKFVVNPSGGLISKGHPLG ATGLAQCAELCWQLRGLAEKRQVPNAQLALQHNLGLGGAVVVALYRLGFP AANSVVRNLTAAGKAATSEDGFKVAPLLKLLEQAMQEDKDNLIEKVRAIY GFKVNNGPNGQTGFWVIDAKQGKGKIIFNGTQKCDVTFIISDDDVFELLT GKLPPQKAFFQGKIKIQGNMGFAMKLMDLQRSAQGRIEELRSKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15421-PA | 544 | GF15421-PA | 1..544 | 1..544 | 2826 | 96 | Plus |
Dana\GF14486-PA | 407 | GF14486-PA | 1..403 | 1..403 | 2081 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21137-PA | 544 | GG21137-PA | 1..544 | 1..544 | 2886 | 98.5 | Plus |
Dere\GG21682-PA | 407 | GG21682-PA | 1..402 | 1..402 | 2130 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10548-PA | 544 | GH10548-PA | 1..544 | 1..544 | 2690 | 90.8 | Plus |
Dgri\GH11197-PA | 407 | GH11197-PA | 1..403 | 1..403 | 2015 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ScpX-PA | 544 | CG17320-PA | 1..544 | 1..544 | 2821 | 100 | Plus |
CG17597-PB | 407 | CG17597-PB | 1..402 | 1..402 | 2046 | 96.5 | Plus |
CG17597-PA | 407 | CG17597-PA | 1..402 | 1..402 | 2046 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20976-PA | 544 | GI20976-PA | 1..544 | 1..544 | 2709 | 91 | Plus |
Dmoj\GI18118-PA | 407 | GI18118-PA | 1..403 | 1..403 | 2062 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19449-PA | 544 | GL19449-PA | 1..544 | 1..544 | 2767 | 94.1 | Plus |
Dper\GL18688-PA | 407 | GL18688-PA | 1..402 | 1..402 | 2064 | 94.3 | Plus |
Dper\GL18687-PA | 407 | GL18687-PA | 1..402 | 1..402 | 2064 | 94.3 | Plus |
Dper\GL15354-PA | 298 | GL15354-PA | 1..293 | 110..402 | 1494 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25964-PA | 544 | GA25964-PA | 1..544 | 1..544 | 2769 | 94.1 | Plus |
Dpse\GA25753-PA | 85 | GA25753-PA | 25..80 | 347..402 | 272 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17298-PA | 544 | GM17298-PA | 1..544 | 1..544 | 2866 | 97.8 | Plus |
Dsec\GM17061-PA | 407 | GM17061-PA | 1..402 | 1..402 | 2040 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24161-PA | 544 | GD24161-PA | 1..544 | 1..544 | 2896 | 98.9 | Plus |
Dsim\GD21807-PA | 407 | GD21807-PA | 1..403 | 1..403 | 2125 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16125-PA | 543 | GJ16125-PA | 1..543 | 1..544 | 2703 | 91.4 | Plus |
Dvir\GJ17742-PA | 407 | GJ17742-PA | 1..403 | 1..403 | 2060 | 93.3 | Plus |
Dvir\GJ17743-PA | 93 | GJ17743-PA | 2..65 | 37..113 | 180 | 54.5 | Plus |