BDGP Sequence Production Resources |
Search the DGRC for LD10857
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 108 |
Well: | 57 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG8239-RA |
Protein status: | LD10857.pep: gold |
Preliminary Size: | 1637 |
Sequenced Size: | 1518 |
Gene | Date | Evidence |
---|---|---|
CG8239 | 2001-11-09 | Blastp of sequenced clone |
CG8239 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8239 | 2008-04-29 | Release 5.5 accounting |
CG8239 | 2008-08-15 | Release 5.9 accounting |
CG8239 | 2008-12-18 | 5.12 accounting |
1518 bp (1518 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069410
> LD10857.complete AGCAGCTGAAAACAAGTGAATTTCTGAATTAAAAACATTTTCAAACATGT TTTCGGTTACTTGTGTGGCGCCCGTAAACATAGCGCTCATCAAATATTGG GGAAAGCGGCACGAAGAGCTAATTCTGCCCGTCAATGATTCCATTAGCAT GACTCTGAGCACCGATGAGCTCTGCGCCAAGACAACAGTGACTGCATCGG AATCCTTTGAAACGAATCGCATGTGGCTGAATGGGGAGGAGGTGCCTTTT GAAGAGAGTTCCCGCCTGCAGCGCTGTTTGAATGAAGTTCATCGATTGGC TGTGGCGAGTGGCTCCCAGAAGGTTCCGCCAACCTGGAAGCTGCACATCG CATCGGTAAACAATTTCCCCACCGCCGCCGGACTGGCATCCAGTGCAGCT GGCTACGCCTGCCTGGTGTACTCCCTGTCCCGACTCTACGATATACCGCT GAATGAGGAGCTGACGACGGTGGCGCGGCAAGGAAGTGGATCGGCATGTC GCAGTCTGTATGGCGGTTTTGTGCAGTGGCATCGCGGAGCTCTGGATGAT GGCAGCGATTCGGTGGCGAGGCAAATAGCTCCATCCGACCACTGGCCCAA CATGCATGTGCTCATCCTGGTCGTTAACGATGCACGCAAGAAGACTGCCT CGACAAGGGGCATGCAACAGGCGGTGAAGACGTCTCAGTTGATCAAACAT CGCGTGGATCAAGTGGTTCCCGACCGGATTATCCGATTGAGGGAGGCCAT CGCAAGCCATGACTTTCAGGCATTCGCCGAGATAACGATGAAGGACTCGA ATCAGTTCCATGCCATCGCCCTGGACACCTATCCGCCGTGTGTCTACATG AACGATGTGTCGCACAGTATCGTGTCCTTCGTTCACGATTATAACGAACG AATGGGTAGCTATCATGCCGCGTACACCTTCGATGCTGGTCCAAATGCAT GCCTCTATGTCCTGGCGGAGCACGTTCCGCATCTCTTGAGCGCTATCCAA AAGGTGTTCCCCAATGATTTAGCGGATGGTGGCACCTACTTGCGAGGCCT TCCCATTCCAAAAGTGCAAGATGCTGAGAGCAGCAAGTTGGATTCACTAG ATGTTCATGCTAAAAATGCTTTCAGATATATAATCCACACGAAAGTCGGT GAAGGACCAAAAGAATTAAGCGCTGATAATAGTTTATTGATAAATGGACT TCCGCTGAAGTGATGAGAGTGATTTTGAGAGTGAATTGCATAGGGAAAGG CACAGAAATTCTATAAAGGAAATATTTTTTAGAATATATTTATGCGAAAA TACATTTATCAAAATGTACAATGGGGCACAATGTATAAACATTTAAAATG CGCACGATTATTCATTATTACGTGACTAAATTTGAATATCTCAATTGCAA CAACTTAATTTATTCTCTTTATTTATTTTTACCTTATTTATTTATGAATT CCGGTGAACAAATGATTGGCTATTTTTAAATAAAATTATGAAAAACGGAA AAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 15639839..15641051 | 286..1498 | 6020 | 99.8 | Plus |
chrX | 22417052 | chrX | 15639661..15639780 | 168..287 | 600 | 100 | Plus |
chrX | 22417052 | chrX | 15639037..15639135 | 1..99 | 495 | 100 | Plus |
chrX | 22417052 | chrX | 15639196..15639266 | 99..169 | 355 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 15750008..15751223 | 286..1501 | 6080 | 100 | Plus |
X | 23542271 | X | 15749830..15749949 | 168..287 | 600 | 100 | Plus |
X | 23542271 | X | 15749206..15749304 | 1..99 | 495 | 100 | Plus |
X | 23542271 | X | 15749365..15749435 | 99..169 | 355 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 15758106..15759321 | 286..1501 | 6080 | 100 | Plus |
X | 23527363 | X | 15757928..15758047 | 168..287 | 600 | 100 | Plus |
X | 23527363 | X | 15757304..15757402 | 1..99 | 495 | 100 | Plus |
X | 23527363 | X | 15757463..15757533 | 99..169 | 355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15639663..15639780 | 170..287 | 100 | -> | Plus |
chrX | 15639037..15639134 | 1..98 | 100 | -> | Plus |
chrX | 15639196..15639266 | 99..169 | 100 | -> | Plus |
chrX | 15639841..15641051 | 288..1498 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8239-RA | 1..1167 | 47..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8239-RA | 1..1167 | 47..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8239-RA | 1..1167 | 47..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8239-RA | 1..1167 | 47..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8239-RA | 1..1167 | 47..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8239-RA | 30..1527 | 1..1498 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8239-RA | 30..1527 | 1..1498 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8239-RA | 41..1538 | 1..1498 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8239-RA | 30..1527 | 1..1498 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8239-RA | 41..1538 | 1..1498 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15749832..15749949 | 170..287 | 100 | -> | Plus |
X | 15749365..15749435 | 99..169 | 100 | -> | Plus |
X | 15749206..15749303 | 1..98 | 100 | -> | Plus |
X | 15750010..15751220 | 288..1498 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15749832..15749949 | 170..287 | 100 | -> | Plus |
X | 15749365..15749435 | 99..169 | 100 | -> | Plus |
X | 15749206..15749303 | 1..98 | 100 | -> | Plus |
X | 15750010..15751220 | 288..1498 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15749832..15749949 | 170..287 | 100 | -> | Plus |
X | 15749365..15749435 | 99..169 | 100 | -> | Plus |
X | 15749206..15749303 | 1..98 | 100 | -> | Plus |
X | 15750010..15751220 | 288..1498 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15643865..15643982 | 170..287 | 100 | -> | Plus |
arm_X | 15643239..15643336 | 1..98 | 100 | -> | Plus |
arm_X | 15643398..15643468 | 99..169 | 100 | -> | Plus |
arm_X | 15644043..15645253 | 288..1498 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15758108..15759318 | 288..1498 | 100 | Plus | |
X | 15757304..15757401 | 1..98 | 100 | -> | Plus |
X | 15757463..15757533 | 99..169 | 100 | -> | Plus |
X | 15757930..15758047 | 170..287 | 100 | -> | Plus |
Translation from 46 to 1212
> LD10857.pep MFSVTCVAPVNIALIKYWGKRHEELILPVNDSISMTLSTDELCAKTTVTA SESFETNRMWLNGEEVPFEESSRLQRCLNEVHRLAVASGSQKVPPTWKLH IASVNNFPTAAGLASSAAGYACLVYSLSRLYDIPLNEELTTVARQGSGSA CRSLYGGFVQWHRGALDDGSDSVARQIAPSDHWPNMHVLILVVNDARKKT ASTRGMQQAVKTSQLIKHRVDQVVPDRIIRLREAIASHDFQAFAEITMKD SNQFHAIALDTYPPCVYMNDVSHSIVSFVHDYNERMGSYHAAYTFDAGPN ACLYVLAEHVPHLLSAIQKVFPNDLADGGTYLRGLPIPKVQDAESSKLDS LDVHAKNAFRYIIHTKVGEGPKELSADNSLLINGLPLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15902-PA | 800 | GF15902-PA | 1..266 | 59..324 | 1083 | 74.4 | Plus |
Dana\GF19747-PA | 50 | GF19747-PA | 1..42 | 1..42 | 204 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17907-PA | 388 | GG17907-PA | 1..387 | 1..388 | 1888 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20637-PA | 393 | GH20637-PA | 1..391 | 1..387 | 1438 | 69.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mvd-PB | 388 | CG8239-PB | 1..388 | 1..388 | 2021 | 100 | Plus |
Mvd-PA | 388 | CG8239-PA | 1..388 | 1..388 | 2021 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19000-PA | 379 | GI19000-PA | 1..377 | 12..387 | 1416 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14496-PA | 406 | GL14496-PA | 1..404 | 1..387 | 1472 | 71.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20922-PA | 82 | GA20922-PA | 1..41 | 42..82 | 160 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22575-PA | 354 | GM22575-PA | 1..341 | 1..341 | 1794 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19966-PA | 390 | GJ19966-PA | 1..388 | 1..387 | 1446 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17667-PA | 396 | GK17667-PA | 1..393 | 1..387 | 1472 | 71.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17215-PA | 391 | GE17215-PA | 1..390 | 1..388 | 1885 | 91.5 | Plus |
Translation from 46 to 1212
> LD10857.hyp MFSVTCVAPVNIALIKYWGKRHEELILPVNDSISMTLSTDELCAKTTVTA SESFETNRMWLNGEEVPFEESSRLQRCLNEVHRLAVASGSQKVPPTWKLH IASVNNFPTAAGLASSAAGYACLVYSLSRLYDIPLNEELTTVARQGSGSA CRSLYGGFVQWHRGALDDGSDSVARQIAPSDHWPNMHVLILVVNDARKKT ASTRGMQQAVKTSQLIKHRVDQVVPDRIIRLREAIASHDFQAFAEITMKD SNQFHAIALDTYPPCVYMNDVSHSIVSFVHDYNERMGSYHAAYTFDAGPN ACLYVLAEHVPHLLSAIQKVFPNDLADGGTYLRGLPIPKVQDAESSKLDS LDVHAKNAFRYIIHTKVGEGPKELSADNSLLINGLPLK*