BDGP Sequence Production Resources |
Search the DGRC for LD10878
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 108 |
Well: | 78 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG11652-RA |
Protein status: | LD10878.pep: gold |
Preliminary Size: | 1874 |
Sequenced Size: | 1774 |
Gene | Date | Evidence |
---|---|---|
CG11652 | 2001-01-01 | Release 2 assignment |
CG11652 | 2001-11-09 | Blastp of sequenced clone |
CG11652 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11652 | 2008-04-29 | Release 5.5 accounting |
CG11652 | 2008-08-15 | Release 5.9 accounting |
CG11652 | 2008-12-18 | 5.12 accounting |
1774 bp (1774 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069411
> LD10878.complete ATTGGTTCAATCAGCTGTTGTCATTCGACATTCGCACGCGGGATTGGAAA GAAATAACTAAAACGTTTTTAAAGCACGCTTAAAGATCAAAAATTCACCA TGTTGGACGTGATCCAACCCAGCAGCAACCTCCCGACCAGCGAAAGCACC GATATTGTGGTGGTCCGAGCCAGACCAAAGAAGGTGTTCAAGCCAAAGGC GCGCATCAATCGGATTCCCCAGGAGCTGCTCGATGATCCACTGCTGCAGC AGGCCATCGACCGTCTGCCCTCGAACTACAACTTCGAGATGCACAAGACG ATTTGGCGCATACGGGAGATGAAGGCCAAGCGTGTGGCCCTGCAACTGCC GGAGGGCCTGCTGATGTACGCCATGGTTATCAGCGACATTGTGGAGCGAT TCACCAGCGCAGATACTGTGATAATGGGCGATGTGACTTACGGAGCTTGC TGCGTGGACGACTACACTGCCAAGGCGTTGGGAGCTGATCTGCTGGTCCA CTACGGCCACAGCTGCCTCATTCCCGTAGATCAGACGTGTGGCATCAAGG TGCTGTACATTTTTGTAGACATCAAAATCGATCCGCTGCACTTCCTGGAC TCTGTAAAGCTGAACTTCCGCCCGGAAGTGGGCCAAATAGCTTTAGTAAG CACAATACAGTTCGTGACAACGCTGCAAGCTGCATCTACTGAGCTAAAGG CAGCCGGCTATGATGTGATAGTACCACAGGCCAAGCCACTTAGTCCTGGA GAGATTCTTGGGTGCACTTCGCCTCAGCTGCCAGAGACAACGAAGATGAT AATATATTTGGGTGACGGGCGTTTTCATCTAGAATCCGCAATGATAGCAA ACCCGTTGCTAAAGGCTTACAAGTACGATCCCTATGAAAAGAAGTTCACC ACAGAGCAGTACGATCACTCGGCGATGCAGAATCTGCGCCTGGACGCTGT TCAGCGGGCTAAGAAGGCGCGCCGCATTGGCATCATACTTGGAACACTCG GAAGACAAGGCAGTTCAAGAGTGCATCGGTTTTTGGAGAAGCGACTTCAT GCCAAGGGTATTGAAACTACCACATTATTGCTGTCGGAGATCTTCCCACA GAAATTGGCTCTTTTCGCCGACATCGACGCCTTTGTGCAGATTGCTTGTC CGCGACTTTCAATCGACTGGGGATCCGCATTTAGCCAACCGTTGCTGAAT CCTTACGAGCTGTCCGTGGTTTTGGGCGATGTCGAGTGGACGCCGCACAA CTCGTCGCCGCGCAACAACGCCTATCCCATGGACTTCTACGCTAGCGGCA GCCTGGGACCCTGGACTCCCAACTTCAAGCCACCAGCGATAGGAGAGTGC GAGAACAAGCCCTCGGCTGACTGTTGTGGAAGATGCACGCGAGCGGAATT GGAGAAGGACGATTCCGGCAAGGCAGCGGCTCTGGACGATCTTCTCGACT TTAAGAAGGGATAAGCGATTTGACCGGCTCGCTTCCAACTGCCCACGGAG CCCTCCATCTCAATCGATCAGCCACGATCGCCTGCCCAAATATATTGATT ACCTACTAATTTAGTTAGTACAAATTTGGTTTTTAAGTTCTTACTTTAAG GGCATCTTTTGTGTTCATCACAGATAGGTTCATAATTTTTATGTTCGCAA ACACTTTTCTAACAGAGATGCAATTGTTAATTAGCAGCAACAATGTACAG AATTTTAAACATTAAAATAATGTTTAAAACGAAAAAAAAAAAAAAAAAAA AAGAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11684773..11685644 | 1734..863 | 4180 | 98.6 | Minus |
chr3L | 24539361 | chr3L | 11685706..11686475 | 865..96 | 3820 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 11687772..11687866 | 95..1 | 430 | 96.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11693876..11694747 | 1734..863 | 4360 | 100 | Minus |
3L | 28110227 | 3L | 11694809..11695578 | 865..96 | 3850 | 100 | Minus |
3L | 28110227 | 3L | 11696875..11696969 | 95..1 | 475 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11686976..11687847 | 1734..863 | 4360 | 100 | Minus |
3L | 28103327 | 3L | 11687909..11688678 | 865..96 | 3850 | 100 | Minus |
3L | 28103327 | 3L | 11689975..11690069 | 95..1 | 475 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tabor | 7345 | Tabor TABOR 7345bp | 6711..6764 | 1701..1752 | 148 | 82.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11684782..11685642 | 865..1725 | 98 | <- | Minus |
chr3L | 11685707..11686475 | 96..864 | 99 | <- | Minus |
chr3L | 11687772..11687866 | 1..95 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11652-RB | 1..1365 | 100..1464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11652-RB | 1..1365 | 100..1464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11652-RA | 1..1365 | 100..1464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11652-RB | 1..1365 | 100..1464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11652-RA | 1..1365 | 100..1464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11652-RA | 18..1742 | 1..1725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11652-RA | 18..1742 | 1..1725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11652-RA | 1..1719 | 7..1725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11652-RA | 18..1742 | 1..1725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11652-RA | 1..1719 | 7..1725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11693885..11694745 | 865..1725 | 100 | <- | Minus |
3L | 11694810..11695578 | 96..864 | 100 | <- | Minus |
3L | 11696875..11696969 | 1..95 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11693885..11694745 | 865..1725 | 100 | <- | Minus |
3L | 11694810..11695578 | 96..864 | 100 | <- | Minus |
3L | 11696875..11696969 | 1..95 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11693885..11694745 | 865..1725 | 100 | <- | Minus |
3L | 11694810..11695578 | 96..864 | 100 | <- | Minus |
3L | 11696875..11696969 | 1..95 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11686985..11687845 | 865..1725 | 100 | <- | Minus |
arm_3L | 11687910..11688678 | 96..864 | 100 | <- | Minus |
arm_3L | 11689975..11690069 | 1..95 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11687910..11688678 | 96..864 | 100 | <- | Minus |
3L | 11686985..11687845 | 865..1725 | 100 | <- | Minus |
3L | 11689975..11690069 | 1..95 | 100 | Minus |
Translation from 99 to 1463
> LD10878.hyp MLDVIQPSSNLPTSESTDIVVVRARPKKVFKPKARINRIPQELLDDPLLQ QAIDRLPSNYNFEMHKTIWRIREMKAKRVALQLPEGLLMYAMVISDIVER FTSADTVIMGDVTYGACCVDDYTAKALGADLLVHYGHSCLIPVDQTCGIK VLYIFVDIKIDPLHFLDSVKLNFRPEVGQIALVSTIQFVTTLQAASTELK AAGYDVIVPQAKPLSPGEILGCTSPQLPETTKMIIYLGDGRFHLESAMIA NPLLKAYKYDPYEKKFTTEQYDHSAMQNLRLDAVQRAKKARRIGIILGTL GRQGSSRVHRFLEKRLHAKGIETTTLLLSEIFPQKLALFADIDAFVQIAC PRLSIDWGSAFSQPLLNPYELSVVLGDVEWTPHNSSPRNNAYPMDFYASG SLGPWTPNFKPPAIGECENKPSADCCGRCTRAELEKDDSGKAAALDDLLD FKKG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11652-PC | 454 | CG11652-PC | 1..454 | 1..454 | 2363 | 100 | Plus |
CG11652-PB | 454 | CG11652-PB | 1..454 | 1..454 | 2363 | 100 | Plus |
CG11652-PA | 454 | CG11652-PA | 1..454 | 1..454 | 2363 | 100 | Plus |
CG7265-PA | 469 | CG7265-PA | 36..369 | 59..396 | 254 | 25.1 | Plus |
Translation from 99 to 1463
> LD10878.pep MLDVIQPSSNLPTSESTDIVVVRARPKKVFKPKARINRIPQELLDDPLLQ QAIDRLPSNYNFEMHKTIWRIREMKAKRVALQLPEGLLMYAMVISDIVER FTSADTVIMGDVTYGACCVDDYTAKALGADLLVHYGHSCLIPVDQTCGIK VLYIFVDIKIDPLHFLDSVKLNFRPEVGQIALVSTIQFVTTLQAASTELK AAGYDVIVPQAKPLSPGEILGCTSPQLPETTKMIIYLGDGRFHLESAMIA NPLLKAYKYDPYEKKFTTEQYDHSAMQNLRLDAVQRAKKARRIGIILGTL GRQGSSRVHRFLEKRLHAKGIETTTLLLSEIFPQKLALFADIDAFVQIAC PRLSIDWGSAFSQPLLNPYELSVVLGDVEWTPHNSSPRNNAYPMDFYASG SLGPWTPNFKPPAIGECENKPSADCCGRCTRAELEKDDSGKAAALDDLLD FKKG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24524-PA | 456 | GF24524-PA | 1..456 | 1..454 | 2299 | 95 | Plus |
Dana\GF18124-PA | 472 | GF18124-PA | 38..372 | 59..396 | 249 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13898-PA | 454 | GG13898-PA | 1..454 | 1..454 | 2424 | 99.6 | Plus |
Dere\GG21012-PA | 468 | GG21012-PA | 36..368 | 59..396 | 226 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15073-PA | 461 | GH15073-PA | 1..461 | 1..454 | 2195 | 88.3 | Plus |
Dgri\GH19238-PA | 482 | GH19238-PA | 37..383 | 63..396 | 239 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dph1-PC | 454 | CG11652-PC | 1..454 | 1..454 | 2363 | 100 | Plus |
Dph1-PB | 454 | CG11652-PB | 1..454 | 1..454 | 2363 | 100 | Plus |
Dph1-PA | 454 | CG11652-PA | 1..454 | 1..454 | 2363 | 100 | Plus |
CG7265-PA | 469 | CG7265-PA | 36..369 | 59..396 | 254 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13721-PA | 458 | GI13721-PA | 1..458 | 1..454 | 2182 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16342-PA | 465 | GL16342-PA | 1..465 | 1..454 | 2277 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11120-PA | 464 | GA11120-PA | 1..464 | 1..454 | 2276 | 91.8 | Plus |
Dpse\GA20222-PA | 481 | GA20222-PA | 42..381 | 63..396 | 245 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24722-PA | 454 | GM24722-PA | 1..454 | 1..454 | 2406 | 98.9 | Plus |
Dsec\GM25818-PA | 469 | GM25818-PA | 36..369 | 59..396 | 260 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12784-PA | 454 | GD12784-PA | 1..454 | 1..454 | 2412 | 99.1 | Plus |
Dsim\GD20394-PA | 469 | GD20394-PA | 36..369 | 59..396 | 245 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14065-PA | 455 | GJ14065-PA | 1..455 | 1..454 | 2178 | 89 | Plus |
Dvir\GJ10845-PA | 478 | GJ10845-PA | 34..380 | 63..396 | 239 | 25.4 | Plus |