BDGP Sequence Production Resources |
Search the DGRC for LD10908
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 109 |
Well: | 8 |
Vector: | pBS SK- |
Associated Gene/Transcript | Elba2-RA |
Protein status: | LD10908.pep: gold |
Preliminary Size: | 1609 |
Sequenced Size: | 1529 |
Gene | Date | Evidence |
---|---|---|
CG9883 | 2001-01-01 | Release 2 assignment |
CG9883 | 2001-11-09 | Blastp of sequenced clone |
CG9883 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9883 | 2008-04-29 | Release 5.5 accounting |
CG9883 | 2008-08-15 | Release 5.9 accounting |
CG9883 | 2008-12-18 | 5.12 accounting |
1529 bp (1529 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069412
> LD10908.complete CAGCCCTGCAAGATTAAGATTTTCGGATTCTCAGGTATCTGGCGCAAGGA ACAATAACTGTTAAGCCGGGCCATAAAACACCAATTTTTCCAACGAATAA TACGCAAAATAAGCCAAGAAAGCCGACGCAGCTGCGTTTTTTGCCAGAAA TAAACCTTTTTGCCTTTACCTGTTGCCAAAATCCGCGTGCAAATGGCCGG CGGATTTCGACCGTACGATCAGGACTCGTGTCCTAACCTTACAAATAGCG AGGCTCCGGAATTCAGCATGTCAGTCGTTTGCAAAACGGAGCCGCACTAC TTTCATCCGCAGACTGCTATCCTGCCCAGCGTCCAGTACTCCCACCCATA TCACCACTATCTGAGCCAGTTCGCCCCGAACTTCGTGCCCTACTACTACC GCCTGCTCTCGCGGCCCATAATGAAGCAGGAGGAGATGGACATCGAGAAC TACATCAACTACGAGGTGGCCGCCCAGCAGACCATGATGCGCCAGCGGAC CCTGAAGCCCCTGGGTCAGCTGCAGATCCAAATGCCGCCTCCCATAATAG TCAACCAGCCAGTTAAGCCAGTTCCCGTTAAGGCAGTGCCAGTCCGCCGA AGCTCTCCGCCCAAGCGACGCGTCATCAATGCCCAGTTGGTAGCGGTAGC CACCGCTTCCGGGGGCATTAAGAACATCGAACCGCGGGTGGAGCCACTGC CTCGCCTGGAGGAATCCTTTAAGCAGCAAGTGGCCAAAATCCAGAAGAGT CAGCACCACTACGAACAACTCTTTGGTCGTCTCACTTCCATGCTAAAGAC CCTGAATCAGCGGTACGACAACGATGCCGAGGATGTGCCCGCGCCGCCCT CCAAGAGACCGCGCCACATGTCCACCAGTTCGTCGGAATCGCACATCCCA GATACTGCCTCTGAAAAGGACGAGAAAGACACTCTTGTGCAGTACCCGCA CCGAGTGCAAAAGGAGGACGGCAGTGCGGTGTACGTACTGGGACCCAATG GCACCCAGATCACAGCCCATCAGTACGGTGAGGTCTTCTGGACCAACGCC CCGGTGGCCACGAGGTGTCTTCTTTGCGTTGTCTTCAGCAGCGATGAGTT GGCTACCCACACGCTGACCGGGAAGCCGTCGCCCGCATTCTACGGCCGCG AAAGACCCCCAAAGCTCCAGTTAGACCAACGCAAGGTGGACGACATCGTG GTCTGTGTGAGAAACCGGACGGGCGGCAAGGAACGGGTGATTCGGGCCAC CATCACTACCAAGTGTGCGGATACCGCCAAGAAGTACAAGAGGCGGGCCA AGAAGGCCCAGAAGGTCGCCATCAAGGAGGAGTATTAGCATGGAGTGGAC AACTATTGGCTAGATATAATCCAGCTATGATCAAGCTCTTCTCAACGACG CGCCACGAAAGGCGCAGAAAGACATTGTATATATTCGTAGTAGGTCCTGC TAAAAGTAAAAGTAAAGTTATATAATCTAGCTGTGATTGAATAAAGACAA GATGAAACCAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9883-RA | 1510 | CG9883-RA | 1..1510 | 1..1510 | 7550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 2577470..2578984 | 1..1509 | 7240 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2577671..2579181 | 1..1511 | 7555 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2577671..2579181 | 1..1511 | 7555 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2577470..2578984 | 1..1509 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9883-RA | 1..1146 | 193..1338 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9883-RA | 1..1146 | 193..1338 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Elba2-RA | 1..1146 | 193..1338 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9883-RA | 1..1146 | 193..1338 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Elba2-RA | 1..1146 | 193..1338 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9883-RA | 1..1509 | 1..1509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9883-RA | 1..1509 | 1..1509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Elba2-RA | 1..1493 | 17..1509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9883-RA | 1..1509 | 1..1509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Elba2-RA | 1..1493 | 17..1509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2577671..2579179 | 1..1509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2577671..2579179 | 1..1509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2577671..2579179 | 1..1509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2577671..2579179 | 1..1509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2577671..2579179 | 1..1509 | 100 | Plus |
Translation from 192 to 1337
> LD10908.hyp MAGGFRPYDQDSCPNLTNSEAPEFSMSVVCKTEPHYFHPQTAILPSVQYS HPYHHYLSQFAPNFVPYYYRLLSRPIMKQEEMDIENYINYEVAAQQTMMR QRTLKPLGQLQIQMPPPIIVNQPVKPVPVKAVPVRRSSPPKRRVINAQLV AVATASGGIKNIEPRVEPLPRLEESFKQQVAKIQKSQHHYEQLFGRLTSM LKTLNQRYDNDAEDVPAPPSKRPRHMSTSSSESHIPDTASEKDEKDTLVQ YPHRVQKEDGSAVYVLGPNGTQITAHQYGEVFWTNAPVATRCLLCVVFSS DELATHTLTGKPSPAFYGRERPPKLQLDQRKVDDIVVCVRNRTGGKERVI RATITTKCADTAKKYKRRAKKAQKVAIKEEY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Elba2-PA | 381 | CG9883-PA | 1..381 | 1..381 | 2006 | 100 | Plus |
insv-PB | 376 | CG3227-PB | 172..371 | 184..380 | 251 | 30.5 | Plus |
insv-PA | 376 | CG3227-PA | 172..371 | 184..380 | 251 | 30.5 | Plus |
Bsg25A-PA | 363 | CG12205-PA | 249..363 | 261..374 | 230 | 43.5 | Plus |
Translation from 192 to 1337
> LD10908.pep MAGGFRPYDQDSCPNLTNSEAPEFSMSVVCKTEPHYFHPQTAILPSVQYS HPYHHYLSQFAPNFVPYYYRLLSRPIMKQEEMDIENYINYEVAAQQTMMR QRTLKPLGQLQIQMPPPIIVNQPVKPVPVKAVPVRRSSPPKRRVINAQLV AVATASGGIKNIEPRVEPLPRLEESFKQQVAKIQKSQHHYEQLFGRLTSM LKTLNQRYDNDAEDVPAPPSKRPRHMSTSSSESHIPDTASEKDEKDTLVQ YPHRVQKEDGSAVYVLGPNGTQITAHQYGEVFWTNAPVATRCLLCVVFSS DELATHTLTGKPSPAFYGRERPPKLQLDQRKVDDIVVCVRNRTGGKERVI RATITTKCADTAKKYKRRAKKAQKVAIKEEY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20590-PA | 380 | GF20590-PA | 1..380 | 1..381 | 1429 | 74.9 | Plus |
Dana\GF23938-PA | 378 | GF23938-PA | 257..374 | 257..373 | 245 | 43.2 | Plus |
Dana\GF20597-PA | 362 | GF20597-PA | 243..357 | 266..380 | 233 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24864-PA | 380 | GG24864-PA | 1..380 | 1..381 | 1967 | 97.1 | Plus |
Dere\GG24506-PA | 375 | GG24506-PA | 242..370 | 253..380 | 245 | 38.8 | Plus |
Dere\GG24360-PA | 370 | GG24360-PA | 253..370 | 259..374 | 237 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11155-PA | 307 | GH11155-PA | 1..284 | 82..361 | 771 | 54.2 | Plus |
Dgri\GH10578-PA | 381 | GH10578-PA | 246..360 | 252..366 | 240 | 39.1 | Plus |
Dgri\GH13742-PA | 377 | GH13742-PA | 246..371 | 248..371 | 230 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Elba2-PA | 381 | CG9883-PA | 1..381 | 1..381 | 2006 | 100 | Plus |
insv-PB | 376 | CG3227-PB | 172..371 | 184..380 | 251 | 30.5 | Plus |
insv-PA | 376 | CG3227-PA | 172..371 | 184..380 | 251 | 30.5 | Plus |
Bsg25A-PA | 363 | CG12205-PA | 249..363 | 261..374 | 230 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17861-PA | 394 | GI17861-PA | 66..375 | 49..361 | 802 | 56.3 | Plus |
Dmoj\GI23044-PA | 390 | GI23044-PA | 265..387 | 256..379 | 241 | 41.1 | Plus |
Dmoj\GI17884-PA | 387 | GI17884-PA | 259..381 | 251..371 | 240 | 43.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26565-PA | 379 | GL26565-PA | 3..377 | 2..380 | 1242 | 69 | Plus |
Dper\GL26458-PA | 398 | GL26458-PA | 267..380 | 252..366 | 236 | 41.7 | Plus |
Dper\GL15989-PA | 409 | GL15989-PA | 291..395 | 260..363 | 235 | 47.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22097-PA | 379 | GA22097-PA | 3..377 | 2..380 | 1237 | 69 | Plus |
Dpse\GA11475-PA | 363 | GA11475-PA | 245..349 | 260..363 | 237 | 47.6 | Plus |
Dpse\GA16802-PA | 376 | GA16802-PA | 245..358 | 252..366 | 236 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18346-PA | 381 | GM18346-PA | 1..381 | 1..381 | 1984 | 97.1 | Plus |
Dsec\GM11124-PA | 100 | GM11124-PA | 1..100 | 1..100 | 529 | 97 | Plus |
Dsec\GM18215-PA | 376 | GM18215-PA | 247..371 | 256..380 | 244 | 39.2 | Plus |
Dsec\GM18079-PA | 363 | GM18079-PA | 246..363 | 259..374 | 238 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23161-PA | 381 | GD23161-PA | 1..381 | 1..381 | 1992 | 97.9 | Plus |
Dsim\GD22821-PA | 376 | GD22821-PA | 243..371 | 253..380 | 246 | 38.8 | Plus |
Dsim\GD22697-PA | 363 | GD22697-PA | 246..363 | 259..374 | 238 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17359-PA | 374 | GJ17359-PA | 42..353 | 49..361 | 818 | 56.9 | Plus |
Dvir\GJ23568-PA | 389 | GJ23568-PA | 273..386 | 266..379 | 233 | 40.4 | Plus |
Dvir\GJ17385-PA | 385 | GJ17385-PA | 267..379 | 260..371 | 231 | 45.1 | Plus |
Dvir\GJ17366-PA | 170 | GJ17366-PA | 58..167 | 257..366 | 170 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24562-PA | 370 | GK24562-PA | 1..362 | 1..372 | 960 | 55.3 | Plus |
Dwil\GK23918-PA | 387 | GK23918-PA | 269..382 | 260..372 | 250 | 46.5 | Plus |
Dwil\GK24494-PA | 379 | GK24494-PA | 248..357 | 256..366 | 234 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18162-PA | 381 | GE18162-PA | 1..381 | 1..381 | 1982 | 97.1 | Plus |
Dyak\GE15077-PA | 375 | GE15077-PA | 172..370 | 184..380 | 256 | 32 | Plus |
Dyak\GE14697-PA | 369 | GE14697-PA | 252..369 | 259..374 | 239 | 44.9 | Plus |