BDGP Sequence Production Resources |
Search the DGRC for LD11027
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 110 |
Well: | 27 |
Vector: | pBS SK- |
Associated Gene/Transcript | GABPI-RA |
Protein status: | LD11027.pep: gold |
Preliminary Size: | 1718 |
Sequenced Size: | 1549 |
Gene | Date | Evidence |
---|---|---|
CG17257 | 2001-01-01 | Release 2 assignment |
CG17257 | 2001-11-09 | Blastp of sequenced clone |
CG17257 | 2008-04-29 | Release 5.5 accounting |
CG17257 | 2008-08-15 | Release 5.9 accounting |
CG17257 | 2008-12-18 | 5.12 accounting |
1549 bp (1549 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069413
> LD11027.complete AGAAATTTAGGGCGTGCACTAATCTAATCTAAACTGTTTCCGTACACGCT GCTCGGAACTCATTAAAAAACGTTCGCCGCGCCATTTCCTGTCCAAATCG ATGTTCTTGATGACAGCCGGCACCTCCAATTTTCTTTCTGCAGCCTGGAG ATCAGAGGCTGAGGAGTCCAAGAGTAAGGAGAACGGGAGTCTCTGCTGCT GCGAGTACGTGGCTGAGGACAGTCGAGAGCGATCCCACATCCTAGGATGC TGTTGTAACTGCGTGGACTTCGACTTAGTTTGCACAAGACTTGTCACCTG CCGAGCCATTGATCGAAGGAACATCGACGGCATGCTCATCGCCTTCCAGG ATAGACTGCGCTTGCCATGGCGCGGAGGAGCCAAGCGAATCTCGCCCGCA GCCGTTGCTCCCGCCTTCATTGTCCCCCTCATGCTGGGATTGGCCACTCT GAACTCAAAGACCGCCATAGTGCTGATGCTCACGCTGGTGGGCTTCACCA TCTGGGGCATGGAGCTGGCTAAGCGGACCGCCACGCGGACAAACTTCTTT TTGAGCTGGCTGGTCTTCTCGGTGTTCTACATGATCATCATATTTGAGTT TCAGGTTCCTCTGCTGGAGCTGGCTCCGGAGGAGAACTACGCGTTAATGT TCTTCTCCTGTGCCGCTTTGTACTGCCTCTATTCCGCCAAGGCACTGTCG CCCTTGAATCTTGTTTCTGCTCAATACGGAACCACGCCCAAGGATGAGCT GCCTGGGATCGCCGAGGCTTCGAGTGGCGAGGAGCAGGCAGAGGCCCAGA CCACACTCCAGATGGAGAGTGTGCTGAGTTTGGATGATGACGAGGTGGGG GATATGGACACTGCTGAGCGATCTGGCTTGATGCACGGTCAGCCCAATAT CTGCGAGATCTGCCGGAAGGTTACTCCAAGGCGGGCATACCACTGTCCCG TCTGCGGAACCTGCGTGAAGAGGCGCGATCATCACAGCTACTGGCTAAAC TGCTGCATTGGCGAGCGGAACTACGTGTGGTACATTGTTGGACTGGCCCT GTCGGAGATCGCTCTGCTGCTCGGCGCAAACTTGACCCTCACTTCCATTT GCCATCCGTTTATGGTGGTGCGACCGCTTGGTTATCCAGTTCTTTTGCCC GACGACTGCAGTGAGGTGTTCGAAGGCTTCGACCTCGGAATCTCCTTTGT GGTGGCTTGCTACGCTCTGCTCATTTCTTCCTACATAGCCTTTATACTCG CTAGACAGGCTTACTTGTGGTGGAAGGGATCCACCTTGCACGAATACAAG CGCACCTCCAACGCCGCAGGACGCAACAGAATCTGGAGCAACTGGCGAGC CATCTTAAAGTGACTACTCACACACCAAAAAGCAAAAAGCACAAGCATGT CGCTTAGATACTAAAGTATTTCAAATCTTAACGCTGTTCTCGGTAGTCGT ACTTAGTCGTACCGCTTTGAAGTCTTTATTGCAATTTAAAATTGATTTAA AATAAATATAATTAAGTAACTCAAAACGCAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 3030637..3031532 | 287..1182 | 4480 | 100 | Plus |
chr2L | 23010047 | chr2L | 3031593..3031939 | 1183..1529 | 1735 | 100 | Plus |
chr2L | 23010047 | chr2L | 3030306..3030586 | 8..288 | 1405 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 3030998..3031893 | 287..1182 | 4480 | 100 | Plus |
2L | 23513712 | 2L | 3031954..3032301 | 1183..1530 | 1740 | 100 | Plus |
2L | 23513712 | 2L | 3030667..3030947 | 8..288 | 1405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 3030306..3030586 | 8..288 | 100 | -> | Plus |
chr2L | 3030639..3031532 | 289..1182 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17257-RA | 1..1263 | 101..1363 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GABPI-RA | 1..1263 | 101..1363 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GABPI-RB | 1..1263 | 101..1363 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17257-RA | 1..1263 | 101..1363 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GABPI-RB | 1..1263 | 101..1363 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17257-RB | 25..1553 | 1..1529 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GABPI-RB | 1..1529 | 1..1529 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GABPI-RB | 31..1559 | 1..1529 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17257-RB | 25..1553 | 1..1529 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GABPI-RA | 129..1650 | 8..1529 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3030667..3030947 | 8..288 | 100 | -> | Plus |
2L | 3031000..3031893 | 289..1182 | 100 | -> | Plus |
2L | 3031954..3032300 | 1183..1529 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3030667..3030947 | 8..288 | 100 | -> | Plus |
2L | 3031000..3031893 | 289..1182 | 100 | -> | Plus |
2L | 3031954..3032300 | 1183..1529 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3030667..3030947 | 8..288 | 100 | -> | Plus |
2L | 3031000..3031893 | 289..1182 | 100 | -> | Plus |
2L | 3031954..3032300 | 1183..1529 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 3031954..3032300 | 1183..1529 | 100 | Plus | |
arm_2L | 3030667..3030947 | 8..288 | 100 | -> | Plus |
arm_2L | 3031000..3031893 | 289..1182 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3030667..3030947 | 8..288 | 100 | -> | Plus |
2L | 3031000..3031893 | 289..1182 | 100 | -> | Plus |
2L | 3031954..3032300 | 1183..1529 | 100 | Plus |
Translation from 100 to 1362
> LD11027.pep MFLMTAGTSNFLSAAWRSEAEESKSKENGSLCCCEYVAEDSRERSHILGC CCNCVDFDLVCTRLVTCRAIDRRNIDGMLIAFQDRLRLPWRGGAKRISPA AVAPAFIVPLMLGLATLNSKTAIVLMLTLVGFTIWGMELAKRTATRTNFF LSWLVFSVFYMIIIFEFQVPLLELAPEENYALMFFSCAALYCLYSAKALS PLNLVSAQYGTTPKDELPGIAEASSGEEQAEAQTTLQMESVLSLDDDEVG DMDTAERSGLMHGQPNICEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLN CCIGERNYVWYIVGLALSEIALLLGANLTLTSICHPFMVVRPLGYPVLLP DDCSEVFEGFDLGISFVVACYALLISSYIAFILARQAYLWWKGSTLHEYK RTSNAAGRNRIWSNWRAILK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14396-PA | 414 | GF14396-PA | 1..414 | 4..420 | 1817 | 82 | Plus |
Dana\GF13019-PA | 280 | GF13019-PA | 93..137 | 268..312 | 152 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24913-PA | 420 | GG24913-PA | 1..420 | 1..420 | 2158 | 95.2 | Plus |
Dere\GG10348-PA | 276 | GG10348-PA | 79..168 | 248..326 | 152 | 33.3 | Plus |
Dere\GG12218-PA | 283 | GG12218-PA | 72..162 | 226..325 | 149 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11398-PA | 427 | GH11398-PA | 7..427 | 8..420 | 1502 | 69.1 | Plus |
Dgri\GH13330-PA | 278 | GH13330-PA | 79..170 | 248..326 | 152 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GABPI-PA | 420 | CG17257-PA | 1..420 | 1..420 | 2230 | 100 | Plus |
GABPI-PB | 420 | CG17257-PB | 1..420 | 1..420 | 2230 | 100 | Plus |
GABPI-PD | 343 | CG17257-PD | 1..343 | 78..420 | 1809 | 100 | Plus |
GABPI-PC | 343 | CG17257-PC | 1..343 | 78..420 | 1809 | 100 | Plus |
Dnz1-PA | 276 | CG6627-PA | 103..168 | 267..326 | 159 | 40.9 | Plus |
CG1407-PC | 227 | CG1407-PC | 124..193 | 261..330 | 150 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14529-PA | 411 | GI14529-PA | 16..411 | 26..420 | 1457 | 69 | Plus |
Dmoj\GI17805-PA | 277 | GI17805-PA | 78..169 | 242..326 | 166 | 37 | Plus |
Dmoj\GI17806-PA | 265 | GI17806-PA | 72..159 | 242..326 | 155 | 31.9 | Plus |
Dmoj\GI19459-PA | 373 | GI19459-PA | 37..196 | 165..333 | 151 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18545-PA | 418 | GL18545-PA | 1..418 | 1..420 | 1798 | 78.4 | Plus |
Dper\GL11511-PA | 338 | GL11511-PA | 124..193 | 261..330 | 151 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14418-PA | 418 | GA14418-PA | 1..418 | 1..420 | 1795 | 78.4 | Plus |
Dpse\GA24755-PA | 338 | GA24755-PA | 124..193 | 261..330 | 151 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18389-PA | 420 | GM18389-PA | 1..420 | 1..420 | 2178 | 96.4 | Plus |
Dsec\GM11347-PA | 276 | GM11347-PA | 79..168 | 248..326 | 153 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23201-PA | 420 | GD23201-PA | 1..420 | 1..420 | 2188 | 96.9 | Plus |
Dsim\GD22217-PA | 276 | GD22217-PA | 79..168 | 248..326 | 153 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16926-PA | 423 | GJ16926-PA | 1..423 | 4..420 | 1388 | 64.9 | Plus |
Dvir\GJ17630-PA | 277 | GJ17630-PA | 78..169 | 242..326 | 163 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15178-PA | 412 | GK15178-PA | 8..410 | 23..419 | 1550 | 72.8 | Plus |
Translation from 100 to 1362
> LD11027.hyp MFLMTAGTSNFLSAAWRSEAEESKSKENGSLCCCEYVAEDSRERSHILGC CCNCVDFDLVCTRLVTCRAIDRRNIDGMLIAFQDRLRLPWRGGAKRISPA AVAPAFIVPLMLGLATLNSKTAIVLMLTLVGFTIWGMELAKRTATRTNFF LSWLVFSVFYMIIIFEFQVPLLELAPEENYALMFFSCAALYCLYSAKALS PLNLVSAQYGTTPKDELPGIAEASSGEEQAEAQTTLQMESVLSLDDDEVG DMDTAERSGLMHGQPNICEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLN CCIGERNYVWYIVGLALSEIALLLGANLTLTSICHPFMVVRPLGYPVLLP DDCSEVFEGFDLGISFVVACYALLISSYIAFILARQAYLWWKGSTLHEYK RTSNAAGRNRIWSNWRAILK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GABPI-PA | 420 | CG17257-PA | 1..420 | 1..420 | 2230 | 100 | Plus |
GABPI-PB | 420 | CG17257-PB | 1..420 | 1..420 | 2230 | 100 | Plus |
GABPI-PD | 343 | CG17257-PD | 1..343 | 78..420 | 1809 | 100 | Plus |
GABPI-PC | 343 | CG17257-PC | 1..343 | 78..420 | 1809 | 100 | Plus |
Dnz1-PA | 276 | CG6627-PA | 103..168 | 267..326 | 159 | 40.9 | Plus |