BDGP Sequence Production Resources |
Search the DGRC for LD11626
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 116 |
Well: | 26 |
Vector: | pBS SK- |
Associated Gene/Transcript | Orc1-RA |
Protein status: | LD11626.pep: gold |
Preliminary Size: | 2968 |
Sequenced Size: | 3155 |
Gene | Date | Evidence |
---|---|---|
CG10667 | 2001-01-01 | Release 2 assignment |
CG10667 | 2002-03-19 | Blastp of sequenced clone |
CG10667 | 2003-01-01 | Sim4 clustering to Release 3 |
Orc1 | 2008-04-29 | Release 5.5 accounting |
Orc1 | 2008-08-15 | Release 5.9 accounting |
Orc1 | 2008-12-18 | 5.12 accounting |
3155 bp (3155 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094780
> LD11626.complete ACAGCGCGGCAAGCTGATCGCAAAAGCAAGGGAGTCAATCTAGTGAAGAC CCAATTGAATTATTGCTGACGTTGGCGACTTGTTAAGCGACTGATAGGGA ATCGCAGCGCGATGGTTAATAAAGAGAACGCCCGCAGTGTGGGCCAGCAG GTGAAGTGGATCGGAAGCCAAGACGAACTGCCGCCGGTGAAGAATCTGGA GCACAAGAACGTCTACTTCTACCAGAAGTGCATCTACGGTCCGCTGACTT TGTCCGTTGGCGACTTTATACTGGTGTCGAACGCGGATGCCGCCGAGCCG GACACAGTGAGTGGATGCGACGTGGCCCGGATCCTGCACATGTACGAGCT GCGCGAGCTGACCGATCGCGAGCCCTGCCGCGCCATCGTCCAGTGGTACT CCTGGCCGAAAGCCATTCCGCACAACAAATACGACGACGACGAGGTGGCC ATAGACTTTAGCCTGGAGGTGATCGAGGAGCATCGCCCGTACGACAACGA CGTGGCCCTCGGTGCCATCTATCGCAAGTGCATCGTGCTGGAGGGTACCT CAAAAACGTCAGCGGAGGAGATTCTCAAACGACACGCCAACAAACTGAAG TCCACGGCCTGCCCCATGTTTGTCAGCCGGTACAGGTTTGTCAAGGTGAA GCGGAGCTATCGCTTGATTCCCTTGGAAATTCACTTGGAGCAGCCGGAGG ACAATGCCAGGCCAACCCGCTCATCTCGCAAATCCCTAACTGCACACAGA GAATCCAAGCGATCAATATCCGCCCGCCACGATGACACAGCTGGCAACAA GGGATCCTCAGTGGAAAAACGACGACGTGCGTCCATGGCAGCCTCGAGTT CCGTGGAGTTCATCGATGTCAACAGCTTCATCTGCGAGAATAAAGTGTCG CCAATTAAGATCGTGGGCGGACGCAGTGTCGTCCGGTTGTCTGAGAAGAA AAATGCTCCGGAGATCAATGCCAACTATCTGCCGGCTTCGCCTCTCACTG AGAAGAACGCCAAGGTGGAGACACCGAAATCCCGGGCCTCGGCAGCCCGC CGCAACCTAAATCTCAGCCTGGATCGCGGAGCCGACACCACAGCCGACTC AGACTGCCTGAACTACTCCATTGTTCAGCAGACTCCCGATCCTAAAACGC CTTCCAACGACATGAAGATCAAGCTGCGCCTTTCGGAGAGAAGGCGTTCG GTGCGCCTCGCATCCATGGACGTGGATCCCTTGTCGTTAGAGGAGGCCGT ACAAGAACCCAATGCCCAGGGACGCAAGCGATTGGGCGTGGCCAATGGCG ATATCTACCATACGCCCACCAAGAAATCCAAAGAGCCTCTGGAATCAGCT GCAGCTACCGAGCAAACGCCCTCGACGAGGCGTAAAAGCATCCTGAAATC AGCAACTAGTCGATTGGCCGAGGGCACGCCCAGGCGCAGTATTCACCTCT CGAACATTGTGGAGCAGCGCGTGTTTGAGGATGATGAAATAATATCCACT CCGAAAAGGGGGCGCTCGAAGAAAACAGTTCAAGACAATGACGAGGACTA TTCGCCAAAGAAATCGGTCCAAAAGACGCCAACACGAACGCGTCGGTCAA GCACCACCACCAAAACAGCGACGACACCCAGCAAAGGGATCACAACCGCA ACTGCAACCCCGATGACGCCCTCCCAAAAGATGAAGAAGATACGAGCCGG TGAACTTAGTCCCAGCATGCAACAGCGCACTGACCTTCCGGCCAAGGATT CCAGCAAATCCGAACTGCAGCTAGCACGCGAACAGCTTCATGTGTCTGTT GTGCCAAAGAGTTTGCCGTGCCGAGAACGGGAATTCGAGAACATTTACGC CTTTCTGGAGGGCAAGATCCAGGATCAGTGCGGCGGCTGCATGTATGTGT CCGGAGTTCCGGGCACTGGCAAAACAGCCACTGTCACTGGCGTCATACGC ACCCTGCAGAGGATGGCTAAACAGAATGAGCTGCCTGCCTTTGAGTATCT GGAGATTAATGGCATGCGACTGACTGAGCCGCGTCAGGCCTACGTCCAGA TCTACAAACAGCTCACGGGCAAGACTGTGTCCTGGGAGCAGGCACACGCT CTGCTAGAGAAACGGTTCACTACTCCGGCGCCGCGTAGAGTTACCACTGT GCTGCTGGTTGATGAGCTGGATATCTTGTGCAACCGGCGCCAAGATGTGG TCTACAATTTGCTCGACTGGCCCACCAAGTCGGCGGCCAAGCTGGTAGTG GTCACCATTGCCAACACCATGGACTTGCCTGAGCGCTTGCTGATGGGTAA AGTCACCTCTCGTCTTGGACTTACCCGTCTCACATTCCAGCCGTACAGCC ACAAGCAGCTGCAAGAGATCGTTACCGCCCGCCTGGGAGGATCGGAGACT TTTAAAGGCGAGGCCGTGCAGCTGGTGGCGCGCAAGGTAGCCGCCGTTTC CGGTGATGCTCGCCGAGCTCTGGACATCTGCCGGCGTGCTACAGAAATTG CTGATACGGCTGCGGTCAAGTGCGTCACAATGCTGCACGTGCAGCAGGCA TTGGCCGAGATGATAGCCAGTGCCAAGGTGCAGGCCATTAGGAACTGTTC GCGGATGGAGCAGATCTTCTTGCAGGCAATTGCAGCTGAAGTTACGCGCA CTGGCGTCGAGGAGACGACTTTCATGGGCGTCTATCAGCAGGTGGAAACT ATTGCCGCCTTCATGGGCGTGACCTTTCCACCACCAGGACGCGCCCTGCG CTTGTGCTCCAAGCTGGGCGCCGAGCGACTCATCATCAGTGAACATTCCC GCAATGACCTCTTTCAGAAAATCCTGCTCAACGTCAGCGCTGATGACATT CACTACGCCCTCAGAGTGGAAGAGATGGTCAACTAAGGCCATAATGCAAG AACAAACGAATAAGAAGTTAATTAAGCACATTAAATTCTCATCTCCATTT TTAAGACTCCAAATCCAGGTTACTTGACCTATCACATTTCCACCATTTTT AAATCATTCATTATTCATACAACATTGTAATAGCTTAAGCGTTTTTAAAT TATTTCTTTTTAAGCGTCATGTTTAAACAATTTAAAGTACAAACTCGTTA CTAAAAATACCAAATAGAACACCAGCACAGTGTAAAAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3411631..3413047 | 1417..1 | 7085 | 100 | Minus |
chr2R | 21145070 | chr2R | 3410683..3411566 | 2300..1417 | 4375 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 3409787..3410624 | 3133..2296 | 4190 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 7524281..7525697 | 1417..1 | 7085 | 100 | Minus |
2R | 25286936 | 2R | 7523333..7524216 | 2300..1417 | 4420 | 100 | Minus |
2R | 25286936 | 2R | 7522435..7523274 | 3135..2296 | 4200 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 7525480..7526896 | 1417..1 | 7085 | 100 | Minus |
2R | 25260384 | 2R | 7524532..7525415 | 2300..1417 | 4420 | 100 | Minus |
2R | 25260384 | 2R | 7523634..7524473 | 3135..2296 | 4200 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3409787..3410623 | 2297..3133 | 100 | <- | Minus |
chr2R | 3410687..3411565 | 1418..2296 | 99 | <- | Minus |
chr2R | 3411631..3413047 | 1..1417 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc1-RA | 1..2775 | 112..2886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc1-RA | 1..2775 | 112..2886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc1-RA | 1..2775 | 112..2886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc1-RA | 1..2775 | 112..2886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc1-RA | 1..2775 | 112..2886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc1-RA | 12..3144 | 1..3133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc1-RA | 12..3144 | 1..3133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc1-RA | 20..3152 | 1..3133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc1-RA | 12..3144 | 1..3133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc1-RA | 20..3152 | 1..3133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7522437..7523273 | 2297..3133 | 100 | <- | Minus |
2R | 7523337..7524215 | 1418..2296 | 100 | <- | Minus |
2R | 7524281..7525697 | 1..1417 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7522437..7523273 | 2297..3133 | 100 | <- | Minus |
2R | 7523337..7524215 | 1418..2296 | 100 | <- | Minus |
2R | 7524281..7525697 | 1..1417 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7522437..7523273 | 2297..3133 | 100 | <- | Minus |
2R | 7523337..7524215 | 1418..2296 | 100 | <- | Minus |
2R | 7524281..7525697 | 1..1417 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3409942..3410778 | 2297..3133 | 100 | <- | Minus |
arm_2R | 3410842..3411720 | 1418..2296 | 100 | <- | Minus |
arm_2R | 3411786..3413202 | 1..1417 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7523636..7524472 | 2297..3133 | 100 | <- | Minus |
2R | 7524536..7525414 | 1418..2296 | 100 | <- | Minus |
2R | 7525480..7526896 | 1..1417 | 100 | Minus |
Translation from 111 to 2885
> LD11626.pep MVNKENARSVGQQVKWIGSQDELPPVKNLEHKNVYFYQKCIYGPLTLSVG DFILVSNADAAEPDTVSGCDVARILHMYELRELTDREPCRAIVQWYSWPK AIPHNKYDDDEVAIDFSLEVIEEHRPYDNDVALGAIYRKCIVLEGTSKTS AEEILKRHANKLKSTACPMFVSRYRFVKVKRSYRLIPLEIHLEQPEDNAR PTRSSRKSLTAHRESKRSISARHDDTAGNKGSSVEKRRRASMAASSSVEF IDVNSFICENKVSPIKIVGGRSVVRLSEKKNAPEINANYLPASPLTEKNA KVETPKSRASAARRNLNLSLDRGADTTADSDCLNYSIVQQTPDPKTPSND MKIKLRLSERRRSVRLASMDVDPLSLEEAVQEPNAQGRKRLGVANGDIYH TPTKKSKEPLESAAATEQTPSTRRKSILKSATSRLAEGTPRRSIHLSNIV EQRVFEDDEIISTPKRGRSKKTVQDNDEDYSPKKSVQKTPTRTRRSSTTT KTATTPSKGITTATATPMTPSQKMKKIRAGELSPSMQQRTDLPAKDSSKS ELQLAREQLHVSVVPKSLPCREREFENIYAFLEGKIQDQCGGCMYVSGVP GTGKTATVTGVIRTLQRMAKQNELPAFEYLEINGMRLTEPRQAYVQIYKQ LTGKTVSWEQAHALLEKRFTTPAPRRVTTVLLVDELDILCNRRQDVVYNL LDWPTKSAAKLVVVTIANTMDLPERLLMGKVTSRLGLTRLTFQPYSHKQL QEIVTARLGGSETFKGEAVQLVARKVAAVSGDARRALDICRRATEIADTA AVKCVTMLHVQQALAEMIASAKVQAIRNCSRMEQIFLQAIAAEVTRTGVE ETTFMGVYQQVETIAAFMGVTFPPPGRALRLCSKLGAERLIISEHSRNDL FQKILLNVSADDIHYALRVEEMVN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13670-PA | 915 | GF13670-PA | 1..913 | 1..922 | 3969 | 81.4 | Plus |
Dana\GF10154-PA | 638 | GF10154-PA | 241..470 | 566..798 | 343 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10735-PA | 913 | GG10735-PA | 1..913 | 1..924 | 4460 | 93.2 | Plus |
Dere\GG15067-PA | 667 | GG15067-PA | 245..499 | 538..798 | 350 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19810-PA | 919 | GH19810-PA | 1..917 | 1..920 | 3621 | 73.7 | Plus |
Dgri\GH22514-PA | 613 | GH22514-PA | 191..449 | 537..798 | 336 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Orc1-PA | 924 | CG10667-PA | 1..924 | 1..924 | 4686 | 100 | Plus |
Cdc6-PA | 662 | CG5971-PA | 90..494 | 393..798 | 359 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19096-PA | 908 | GI19096-PA | 1..906 | 1..920 | 3658 | 76 | Plus |
Dmoj\GI12416-PA | 622 | GI12416-PA | 230..458 | 567..798 | 340 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20109-PA | 933 | GL20109-PA | 1..929 | 1..922 | 3922 | 79.3 | Plus |
Dper\GL10294-PA | 616 | GL10294-PA | 204..449 | 549..798 | 305 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10479-PA | 935 | GA10479-PA | 1..931 | 1..922 | 3916 | 79.7 | Plus |
Dpse\GA19269-PA | 616 | GA19269-PA | 204..449 | 549..798 | 313 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20781-PA | 924 | GM20781-PA | 1..924 | 1..924 | 4837 | 97.3 | Plus |
Dsec\GM24924-PA | 592 | GM24924-PA | 153..424 | 518..798 | 350 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10243-PA | 536 | GD10243-PA | 11..536 | 397..924 | 2710 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20070-PA | 923 | GJ20070-PA | 1..921 | 1..920 | 3656 | 75.1 | Plus |
Dvir\GJ12309-PA | 613 | GJ12309-PA | 125..449 | 468..798 | 347 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10698-PA | 888 | GK10698-PA | 1..881 | 1..921 | 3481 | 74.7 | Plus |
Dwil\GK17476-PA | 605 | GK17476-PA | 195..440 | 549..798 | 321 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23860-PA | 768 | GE23860-PA | 1..745 | 1..755 | 3785 | 93.8 | Plus |
Dyak\GE23871-PA | 118 | GE23871-PA | 1..118 | 807..924 | 617 | 97.5 | Plus |
Dyak\GE21291-PA | 706 | GE21291-PA | 230..538 | 482..798 | 357 | 32.1 | Plus |
Translation from 111 to 2885
> LD11626.hyp MVNKENARSVGQQVKWIGSQDELPPVKNLEHKNVYFYQKCIYGPLTLSVG DFILVSNADAAEPDTVSGCDVARILHMYELRELTDREPCRAIVQWYSWPK AIPHNKYDDDEVAIDFSLEVIEEHRPYDNDVALGAIYRKCIVLEGTSKTS AEEILKRHANKLKSTACPMFVSRYRFVKVKRSYRLIPLEIHLEQPEDNAR PTRSSRKSLTAHRESKRSISARHDDTAGNKGSSVEKRRRASMAASSSVEF IDVNSFICENKVSPIKIVGGRSVVRLSEKKNAPEINANYLPASPLTEKNA KVETPKSRASAARRNLNLSLDRGADTTADSDCLNYSIVQQTPDPKTPSND MKIKLRLSERRRSVRLASMDVDPLSLEEAVQEPNAQGRKRLGVANGDIYH TPTKKSKEPLESAAATEQTPSTRRKSILKSATSRLAEGTPRRSIHLSNIV EQRVFEDDEIISTPKRGRSKKTVQDNDEDYSPKKSVQKTPTRTRRSSTTT KTATTPSKGITTATATPMTPSQKMKKIRAGELSPSMQQRTDLPAKDSSKS ELQLAREQLHVSVVPKSLPCREREFENIYAFLEGKIQDQCGGCMYVSGVP GTGKTATVTGVIRTLQRMAKQNELPAFEYLEINGMRLTEPRQAYVQIYKQ LTGKTVSWEQAHALLEKRFTTPAPRRVTTVLLVDELDILCNRRQDVVYNL LDWPTKSAAKLVVVTIANTMDLPERLLMGKVTSRLGLTRLTFQPYSHKQL QEIVTARLGGSETFKGEAVQLVARKVAAVSGDARRALDICRRATEIADTA AVKCVTMLHVQQALAEMIASAKVQAIRNCSRMEQIFLQAIAAEVTRTGVE ETTFMGVYQQVETIAAFMGVTFPPPGRALRLCSKLGAERLIISEHSRNDL FQKILLNVSADDIHYALRVEEMVN*