BDGP Sequence Production Resources |
Search the DGRC for LD11650
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 116 |
Well: | 50 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG4538-RA |
Protein status: | LD11650.pep: gold |
Sequenced Size: | 3124 |
Gene | Date | Evidence |
---|---|---|
CG4538 | 2008-04-29 | Picked prior to 5.5 |
CG4538 | 2008-08-15 | Release 5.9 accounting |
CG4538 | 2008-12-18 | 5.12 accounting |
CG4538 | 2011-03-01 | Transcript Validation |
3124 bp assembled on 2008-07-31
GenBank Submission: BT032831
> LD11650.complete AAATTACGTGCAGAGCGCAATCTATTCCCCCCATTTTCCACCGAAAATAC AGCAAGGCAGGCGGAAAATCATCCAAATTGCGACGCACTTTGGCGAGCGA CGGATAACCAACAAGTGGATATAGAAAAGCAATCCCTGCAAAGCGAGGCA TCCCCAGCAGAAGTCACAACAATAACTTTGCAGATCAGCAGAGCAAGAAG AAGAAGCGGCCGCCAGCTGAGTAGCAAATCGGTGCAAAGCAGGGGCGCAG GGGAATCCGAGTCCAGGAGCAACTGCAGCGGGCGCGGAGGAAGCGGTAGA CGGAACAGAGGCACAGAGGCGGCGGGCAGCAGCCACCATGAGCATGGTGC GGCGGATTATCCTGCTGGGCCCCAAATACAGTGTGTGGGCAAAGGGAAGC GGAGCTGGTCAAACACATGGCTCGGCAAGATGCGTTATCCTAAGCGCAGG TTCTGCGGAGAACAGCGACTGTGGCGTACGACGCTTTCACCTGGCAACGC GGAACTGCGCGAGGAATCGACTGATGAGACTGGAGCCCGCGATGGCAATA CCGGCGTATATTGATGTAACTAACGCACACTCAAGAACGCCAGAGGACTC CAGCGAGAGTGGGAGCGGCAGCGAAGGGGGAGCCAGTGCGTCGGGAGGTA GTGGAGCGAAGAGCCCCGGCGGTGCGGCTGGGTCTGGAGCAAGTTCGACC AGTGGTGCCGATCCGCCAGGCGGTGGCAGTGACAAGTTCCTCTCGTGCCC AAAGTGCGGCAGCGCCTGCACCCAGGTTGAGACCTTTGTCAGCTCGACGC GGTTCGTTAAGTGCGCCAAGTGCAACTACTTCTTCGTGGTGCTCTCGGAG GTGGAGACTAAGCAGCGCACCAAGGACGAGCCCAAAAACCAGCGCAAGCC GCCACCTCCGCCACAGAAAATCATGGAGTATCTGGACAAACACGTGGTGG GCCAAGATTTTGCCAAAAAGGTGCTGGCGGTGGCCGTCTACAATCATTAT AAGCGCATCCATCACAATCTGCCGCAACTGCAAAACCAGGGAGCGGGTGC CAGCAATGGAGCCGGTGGCGGCCTAGATGGTATTCCTCGGCCCGATCTTC TACACATCACCGGTATTGGTCACACGCTGAACAGCTCCCCGGGCAACGAA CTGCCACCAAAGTCGCCGACTCAAATGGGCATGGGCGGAGGAATGGGAGG ACCTGGACTTGGAGCAGGACTAACCGGCGCATCATCTAGCAATGCGCGTG GAGGTGGCGACAACCGGTCCGGATCAGAAATACTTGACCGCCAGTCCACC GATGTCAAACTGGAGAAGAGTAACATTATCATGTTGGGCCCCACGGGATC CGGTAAGACGCTGATCGCCCAGACGATCGCCAAGTGCCTGGATGTGCCCT TCGCCATTTGCGACTGCACCACGTTAACACAGGCGGGCTATGTGGGCGAG GACATCGAAAGCGTAATTTCAAAGCTTCTGCAAGATGCCAACTACAATGT AGAGCGCGCACAGACGGGCATTGTTTTCCTCGACGAGGTGGACAAAATCG GTGCCGTCCCCGGAATCCATCAGCTTCGTGACGTTGGCGGCGAGGGCGTC CAGCAAGGCATGCTGAAAATGCTCGAAGGCACAGTGGTCAACGTGCCGGA GCGTAACTCCCCGCGAAAGCTGCGTGGCGAAACGGTCCAGGTGGACACCA CAAATATCCTTTTCGTGGCCTCTGGTGCCTACACAGGACTGGACAGGCTT ATCGCACGTCGTCTCAACGAAAAGTATTTGGGTTTCGGCATGCCATCGAC CAGCGGATCTGGCCGTCGTGCAGCTCAATCAGCCGCCAGTCCCATGGACA ACGACCAGGAAGAGCGTGATAAATGCCTGACCAAAGTGCAGGCCCGTGAT CTCGTTGAGTTCGGCATGATACCGGAATTCGTTGGACGTTTCCCGGTTAT CGTTCCCTTCCACAGTTTGAACGTTAGCATGCTGGTGCGCATCCTAACCG AGCCGCGAAACGCTCTAGTGCCGCAATATAAGGCACTGTTGGGTCTTGAT GAGGTGGACCTTACGTTCACCGAGGATGCTGTGAAGTCGATAGCCCAGCT TGCAATGGAAAGGCACACTGGAGCTCGTGGACTGCGCTCTATAATGGAAC AACTGCTGCTGGATCCCATGTTCATAGTGCCTGGTTCAGACATTCGGGGT GTTCACATAACCGCCGACTATGTTAAAGGCAGCGCCACCCCCGAGTACAG CCGCGATGCAGACGCCGCGGCATCTGGGACTGTTGCCACGGATTCCGATA CCACAACCGATAATGATAAGAACTTTGAGAATAGTGAGAAAGTACGACTA AAACAGTAAATCAAACAGAGATACCCACATCCAAAGCCAACCAAAACAGA AATCGAGACAACACTTGAACAAAAGAGAAAACTTTCAATTCGCAACGCTT TCCGAATTGCTTGTTCTTTGCAAACTCTTTTGTCTTCTATCCACTACTGT TCAGCTTGTTAAACTCGTCCAGCTGCTTAATTTCGAATCGTCAGCGCTAA TTTCTCGCATAAACACAATTTAATGTTGAACCCTTATGATACTTTCATTT GCCCACTCTAACATGTATATTTTTTAGTCTGGTTTGAATGGTAAATTGAT TGGTGCGTCGTAGATCCCTACCTCGAACCTATCACTCTGTAAAATATGAA CCGCTGAGGAGTGTATACATTTATAAAGAATGTCCTCAATCCCCAAATGC ATCTGTGATTCATAAACGACGAGCAGCGCAGTCTTTTGAGCCCGAAGCAA TTGTAAGTGGAACAACAAATCCTAAAGGGATATTTAAATAAATGCCACAG TTTCTTAAACATTATATTACACAAATATCGGAAATCTGCAATGTTGGCAA TGATGTGGTCCATTGGCGCTAGGAACCTCTTTTGCATATAACAATTATAT ATACAAACGTAAACGTATATTTAGGCAAATTTTTGCATAGTCTAAATTGA GTTTCTAAATGAGTTCTTGTAGCGTTGTAAAGATGACAAGCGAGAAGCAC GTTCTACCTTTAACTAATTTAAGTTGAAAAAAACATTTTTAAAACAAAAA ACAAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 15724365..15725744 | 1774..395 | 6900 | 100 | Minus |
chr3R | 27901430 | chr3R | 15722782..15723742 | 3106..2146 | 4805 | 100 | Minus |
chr3R | 27901430 | chr3R | 15726773..15727168 | 396..1 | 1980 | 100 | Minus |
chr3R | 27901430 | chr3R | 15723806..15724029 | 2147..1924 | 1120 | 100 | Minus |
chr3R | 27901430 | chr3R | 15724157..15724310 | 1925..1772 | 770 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 19900432..19901811 | 1774..395 | 6900 | 100 | Minus |
3R | 32079331 | 3R | 19898832..19899809 | 3123..2146 | 4860 | 99.8 | Minus |
3R | 32079331 | 3R | 19902840..19903235 | 396..1 | 1980 | 100 | Minus |
3R | 32079331 | 3R | 19899873..19900096 | 2147..1924 | 1120 | 100 | Minus |
3R | 32079331 | 3R | 19900224..19900377 | 1925..1772 | 770 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 19641263..19642642 | 1774..395 | 6900 | 100 | Minus |
3R | 31820162 | 3R | 19639663..19640640 | 3123..2146 | 4860 | 99.7 | Minus |
3R | 31820162 | 3R | 19643671..19644066 | 396..1 | 1980 | 100 | Minus |
3R | 31820162 | 3R | 19640704..19640927 | 2147..1924 | 1120 | 100 | Minus |
3R | 31820162 | 3R | 19641055..19641208 | 1925..1772 | 770 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 15722816..15723741 | 2147..3072 | 100 | <- | Minus |
chr3R | 15723807..15724028 | 1925..2146 | 100 | <- | Minus |
chr3R | 15724158..15724307 | 1775..1924 | 100 | <- | Minus |
chr3R | 15724365..15725743 | 396..1774 | 100 | <- | Minus |
chr3R | 15726774..15727168 | 1..395 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4538-RA | 1..2022 | 338..2359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4538-RA | 1..2022 | 338..2359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4538-RA | 1..2022 | 338..2359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4538-RA | 1..2022 | 338..2359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4538-RA | 1..2022 | 338..2359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4538-RA | 455..3560 | 1..3106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4538-RA | 455..3560 | 1..3106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4538-RA | 455..3560 | 1..3106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4538-RA | 455..3560 | 1..3106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4538-RA | 1..3106 | 1..3106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19900432..19901810 | 396..1774 | 100 | <- | Minus |
3R | 19898849..19899808 | 2147..3106 | 100 | <- | Minus |
3R | 19899874..19900095 | 1925..2146 | 100 | <- | Minus |
3R | 19900225..19900374 | 1775..1924 | 100 | <- | Minus |
3R | 19902841..19903235 | 1..395 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19900432..19901810 | 396..1774 | 100 | <- | Minus |
3R | 19898849..19899808 | 2147..3106 | 100 | <- | Minus |
3R | 19899874..19900095 | 1925..2146 | 100 | <- | Minus |
3R | 19900225..19900374 | 1775..1924 | 100 | <- | Minus |
3R | 19902841..19903235 | 1..395 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19900432..19901810 | 396..1774 | 100 | <- | Minus |
3R | 19898849..19899808 | 2147..3106 | 100 | <- | Minus |
3R | 19899874..19900095 | 1925..2146 | 100 | <- | Minus |
3R | 19900225..19900374 | 1775..1924 | 100 | <- | Minus |
3R | 19902841..19903235 | 1..395 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 15724571..15725530 | 2147..3106 | 100 | <- | Minus |
arm_3R | 15725596..15725817 | 1925..2146 | 100 | <- | Minus |
arm_3R | 15725947..15726096 | 1775..1924 | 100 | <- | Minus |
arm_3R | 15726154..15727532 | 396..1774 | 100 | <- | Minus |
arm_3R | 15728563..15728957 | 1..395 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19639680..19640639 | 2147..3106 | 100 | <- | Minus |
3R | 19640705..19640926 | 1925..2146 | 100 | <- | Minus |
3R | 19641056..19641205 | 1775..1924 | 100 | <- | Minus |
3R | 19641263..19642641 | 396..1774 | 100 | <- | Minus |
3R | 19643672..19644066 | 1..395 | 100 | Minus |
Translation from 337 to 2358
> LD11650.pep MSMVRRIILLGPKYSVWAKGSGAGQTHGSARCVILSAGSAENSDCGVRRF HLATRNCARNRLMRLEPAMAIPAYIDVTNAHSRTPEDSSESGSGSEGGAS ASGGSGAKSPGGAAGSGASSTSGADPPGGGSDKFLSCPKCGSACTQVETF VSSTRFVKCAKCNYFFVVLSEVETKQRTKDEPKNQRKPPPPPQKIMEYLD KHVVGQDFAKKVLAVAVYNHYKRIHHNLPQLQNQGAGASNGAGGGLDGIP RPDLLHITGIGHTLNSSPGNELPPKSPTQMGMGGGMGGPGLGAGLTGASS SNARGGGDNRSGSEILDRQSTDVKLEKSNIIMLGPTGSGKTLIAQTIAKC LDVPFAICDCTTLTQAGYVGEDIESVISKLLQDANYNVERAQTGIVFLDE VDKIGAVPGIHQLRDVGGEGVQQGMLKMLEGTVVNVPERNSPRKLRGETV QVDTTNILFVASGAYTGLDRLIARRLNEKYLGFGMPSTSGSGRRAAQSAA SPMDNDQEERDKCLTKVQARDLVEFGMIPEFVGRFPVIVPFHSLNVSMLV RILTEPRNALVPQYKALLGLDEVDLTFTEDAVKSIAQLAMERHTGARGLR SIMEQLLLDPMFIVPGSDIRGVHITADYVKGSATPEYSRDADAAASGTVA TDSDTTTDNDKNFENSEKVRLKQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17351-PA | 675 | GF17351-PA | 1..675 | 1..673 | 2843 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15775-PA | 672 | GG15775-PA | 1..672 | 1..673 | 3076 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23301-PA | 675 | GH23301-PA | 1..675 | 1..673 | 2541 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4538-PD | 673 | CG4538-PD | 1..673 | 1..673 | 3472 | 100 | Plus |
CG4538-PA | 673 | CG4538-PA | 1..673 | 1..673 | 3472 | 100 | Plus |
CG4538-PC | 679 | CG4538-PC | 1..668 | 1..668 | 3449 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10327-PA | 672 | GI10327-PA | 1..672 | 1..673 | 2577 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12413-PA | 666 | GL12413-PA | 1..666 | 1..673 | 2576 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27659-PA | 666 | GA27659-PA | 1..666 | 1..673 | 2565 | 80.8 | Plus |
Dpse\GA18242-PA | 666 | GA18242-PA | 1..666 | 1..673 | 2563 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26887-PA | 673 | GM26887-PA | 1..673 | 1..673 | 3535 | 98.7 | Plus |
Dsec\GM24560-PA | 667 | GM24560-PA | 236..663 | 178..658 | 1266 | 57 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20094-PA | 673 | GD20094-PA | 1..673 | 1..673 | 3529 | 98.7 | Plus |
Dsim\GD12633-PA | 694 | GD12633-PA | 251..670 | 168..642 | 1261 | 56.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10182-PA | 683 | GJ10182-PA | 1..683 | 1..673 | 2592 | 78.3 | Plus |
Dvir\GJ14616-PA | 1461 | GJ14616-PA | 8..108 | 241..340 | 330 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22807-PA | 683 | GK22807-PA | 1..683 | 1..673 | 2664 | 78.8 | Plus |
Translation from 337 to 2358
> LD11650.hyp MSMVRRIILLGPKYSVWAKGSGAGQTHGSARCVILSAGSAENSDCGVRRF HLATRNCARNRLMRLEPAMAIPAYIDVTNAHSRTPEDSSESGSGSEGGAS ASGGSGAKSPGGAAGSGASSTSGADPPGGGSDKFLSCPKCGSACTQVETF VSSTRFVKCAKCNYFFVVLSEVETKQRTKDEPKNQRKPPPPPQKIMEYLD KHVVGQDFAKKVLAVAVYNHYKRIHHNLPQLQNQGAGASNGAGGGLDGIP RPDLLHITGIGHTLNSSPGNELPPKSPTQMGMGGGMGGPGLGAGLTGASS SNARGGGDNRSGSEILDRQSTDVKLEKSNIIMLGPTGSGKTLIAQTIAKC LDVPFAICDCTTLTQAGYVGEDIESVISKLLQDANYNVERAQTGIVFLDE VDKIGAVPGIHQLRDVGGEGVQQGMLKMLEGTVVNVPERNSPRKLRGETV QVDTTNILFVASGAYTGLDRLIARRLNEKYLGFGMPSTSGSGRRAAQSAA SPMDNDQEERDKCLTKVQARDLVEFGMIPEFVGRFPVIVPFHSLNVSMLV RILTEPRNALVPQYKALLGLDEVDLTFTEDAVKSIAQLAMERHTGARGLR SIMEQLLLDPMFIVPGSDIRGVHITADYVKGSATPEYSRDADAAASGTVA TDSDTTTDNDKNFENSEKVRLKQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4538-PD | 673 | CG4538-PD | 1..673 | 1..673 | 3472 | 100 | Plus |
CG4538-PA | 673 | CG4538-PA | 1..673 | 1..673 | 3472 | 100 | Plus |
CG4538-PC | 679 | CG4538-PC | 1..668 | 1..668 | 3449 | 100 | Plus |