BDGP Sequence Production Resources |
Search the DGRC for LD11958
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 119 |
Well: | 58 |
Vector: | pBS SK- |
Associated Gene/Transcript | ImpE3-RB |
Protein status: | LD11958.pep: gold |
Preliminary Size: | 2182 |
Sequenced Size: | 2254 |
Gene | Date | Evidence |
---|---|---|
CG2723 | 2001-01-01 | Release 2 assignment |
CG2747 | 2001-01-01 | Release 2 assignment |
CG2723 | 2001-10-10 | Blastp of sequenced clone |
CG2723 | 2003-01-01 | Sim4 clustering to Release 3 |
ImpE3 | 2008-04-29 | Release 5.5 accounting |
ImpE3 | 2008-08-15 | Release 5.9 accounting |
ImpE3 | 2008-12-18 | 5.12 accounting |
2254 bp (2254 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061140
> LD11958.complete GCCGTTATGTCTGTGCTAAAAAAGCAGCGGCACGGCTTGCTTAGGAAACC CGTTATGCTAAGTCGTTTACCGTGCTCCAATTTCCTCGAAAAAAGCGAAA ACTCATCTAGACGGCAACACAAGAGCAACAACAACAGGTTAATGCTTCTC AAACAGCTGTTTGCCGGGCTCCCTTGCTCTCCTTTTTTGATCGACAGCGG TCATCAATGGCTCTCAAAGTGTCGCACTTGCAAGTGATTCTTAAACTGCA CCAAAGATGCATTTAATTTAATGTAAGAGCTTTTGTACTCCTTGCAAATG AATAAAGCACCCAAAATCAGGTTTATGTGCGGTTCGCCTGCTTTCTGCCT GTGTTTGTGCACACTTTGCATATTTATGACCAAACTGGTTGTTCTTTTGG CAACGGAACATCTTTCACTCTTTCCAAGAACAACATTCTCCGCCAAAAGT CGGTGGTTACAAAATTTACGCAACAAGCGGCGATCGCGGTCGCTGGCCTC TCCACTCAACGAGTTTGCTAAAACCCCCAAAAAATCGCATGTGAAAAGTT GAAGCCCAACACCGAAGCTATAAGTATGCTCAGAAATCATTGACGCTATT CCATTAGGGCAAATGATTTAAAAAGGAAAACCGAGAAGTATTGCTTTAAT AACATTTATTAATAGAAATAAAAGATTGTGATGATACTCAAATTAATATA AAATCAATACAGATTAGTTGTAATCGTTTGACCCTGAAGATTTTTTTATA TTTTCTGCGCGTTAAAATACCTTTTGAAAGAGTATAAGCTAAAGCCGAAC CCGCTGTCACCCATTTTGAAAACCAGATACAGATACGGAGACAAAGACAG ATGCAGAGCCAACTACAGATGCTCGCTGGTTGCTGGGAAGAGTCGCTTCA GTTGAGTGCCTCCATTCCCCCAGAGTAAACCGTTCCCGCCAGAAGAAAGT AAGAAAAGCGAGAAATGCGCAGTGGGCTAACGGTTCGTCCAATGCTGGTG GTGCTTCTAGTGGGTCACCTAGTGGATCCAGTGGCGCCGGCTAACCTACT GACTAGCTATCTGCCCGCCTCCATGCAGGCCTTGGCATACTATATTGACC TGCTGCAGTACGAGCCACTATCAAGCACAACAGTGGAGCCTCCTTTCAGT GCGGATGAAGAAGGTATGGAATCCACCACTGCAAATCCGCGCCCATCCAC ACCGTTGCCCACGAGGATGAGAACCACTACCACAAGGCGACCGATTGGAG CAGGTGCGTCTGGATCTGGTGGCATGGGCTGGTGGCAGCCGCCAAGTTGG TGGGAAACGCCGAAGAGATCATCCACAACCGAGAGACCCACATCGCCACC CACTGTGCCGCACCGTCCGGCAATTTTTGCACCAACTGCGCCGCCGGAAA AGTCCCTTGAGGGCAACGATCTATTTGCAGAAATCAAAGATGATAGCGAC TTTGATACCCTGCCTTTGTCTTTGATCCGTGATATTCAAAGCGAGCGCTA CGACTTTACCAACGATGTGGAGTCACTGGATAACTTTTTGCGCCTCTACG ACGATAACTACGGAAGGGCCGCTTTCGGTTCTGAGTCCGCGATGGATCGA TGGAGCACCGCCTCGATCGCAGGCAAAAAGAGAGTTCCTCCCACTAAGCC CTATGTGGATTTCCTGCTGGTTTACGATCTGCTAAAGCGCGATGCTAAGG CGGCGAGTCTGAGCAAGTACGAGGGATATTCCGAGAATCTGCTGGTGGAG CTGCATGCCTTGTCACAGGTTTCGGCGGCCAGGCAATTGTATACTCTATT TAAAAGGATGTTGGACCGGGGCGATATCCAGCGCAGTGACGTGGTGGCCC GCGTGCAGGGAATCGCCAAAGATCTGGGGAATCCCAAAAGCCCCACTTCC AAGGCATTGACTTTTATTCCCAGCATGCAGTTTTTACCTTAAGCTCTTAG CATAAGTCGCAATAAAGTCGAAGGACCTACTGACCTTACAATTGTGTGTG TACTTTGATAAATTCGAATTTTTGTTTTGGGGAATAGTCACCCAAAATCA GTTTGAAACAAGAGCTGATAAAATAGTTTATATATTTATTTGAGCACATT TTTTAGAAATATTAGACAGTGTACAAAGTTTTGTTTATACATAATTTGTA GTGCATTGTTGTTTTATTATTGCAGATTAATCGGGGCCTTGTGCAAGGTT TCTAACATTTTCAATAAAATAAAAATCGAAGCAACTAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 3854282..3856517 | 2236..1 | 11120 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 8028209..8030445 | 2237..1 | 11185 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 7769040..7771276 | 2237..1 | 11185 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 1235..1329 | 2173..2073 | 122 | 61.4 | Minus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 4839..4908 | 2203..2132 | 120 | 68.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 3854282..3856517 | 1..2236 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE3-RA | 1..978 | 965..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE3-RA | 1..978 | 965..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE3-RB | 1..978 | 965..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE3-RA | 1..978 | 965..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE3-RB | 1..978 | 965..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE3-RA | 1..2236 | 1..2236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE3-RA | 1..2236 | 1..2236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE3-RB | 1..1094 | 900..1993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE3-RA | 1..2236 | 1..2236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE3-RB | 1..1094 | 900..1993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8028210..8030445 | 1..2236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8028210..8030445 | 1..2236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8028210..8030445 | 1..2236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 3853932..3856167 | 1..2236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7769041..7771276 | 1..2236 | 100 | Minus |
Translation from 964 to 1941
> LD11958.pep MRSGLTVRPMLVVLLVGHLVDPVAPANLLTSYLPASMQALAYYIDLLQYE PLSSTTVEPPFSADEEGMESTTANPRPSTPLPTRMRTTTTRRPIGAGASG SGGMGWWQPPSWWETPKRSSTTERPTSPPTVPHRPAIFAPTAPPEKSLEG NDLFAEIKDDSDFDTLPLSLIRDIQSERYDFTNDVESLDNFLRLYDDNYG RAAFGSESAMDRWSTASIAGKKRVPPTKPYVDFLLVYDLLKRDAKAASLS KYEGYSENLLVELHALSQVSAARQLYTLFKRMLDRGDIQRSDVVARVQGI AKDLGNPKSPTSKALTFIPSMQFLP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16868-PA | 322 | GF16868-PA | 1..322 | 1..325 | 1199 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24730-PA | 325 | GG24730-PA | 1..325 | 1..325 | 1339 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15156-PA | 341 | GH15156-PA | 23..341 | 22..325 | 1043 | 68.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ImpE3-PB | 325 | CG2723-PB | 1..325 | 1..325 | 1686 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22492-PA | 333 | GI22492-PA | 21..333 | 22..325 | 1025 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22337-PA | 326 | GL22337-PA | 21..326 | 22..325 | 1152 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15448-PA | 326 | GA15448-PA | 21..326 | 22..325 | 1159 | 75 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10435-PA | 325 | GM10435-PA | 1..325 | 1..325 | 1450 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19436-PA | 325 | GD19436-PA | 1..325 | 1..325 | 1644 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10093-PA | 328 | GJ10093-PA | 25..328 | 22..325 | 1082 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13823-PA | 542 | GK13823-PA | 241..542 | 23..325 | 1056 | 69.6 | Plus |
Translation from 964 to 1941
> LD11958.hyp MRSGLTVRPMLVVLLVGHLVDPVAPANLLTSYLPASMQALAYYIDLLQYE PLSSTTVEPPFSADEEGMESTTANPRPSTPLPTRMRTTTTRRPIGAGASG SGGMGWWQPPSWWETPKRSSTTERPTSPPTVPHRPAIFAPTAPPEKSLEG NDLFAEIKDDSDFDTLPLSLIRDIQSERYDFTNDVESLDNFLRLYDDNYG RAAFGSESAMDRWSTASIAGKKRVPPTKPYVDFLLVYDLLKRDAKAASLS KYEGYSENLLVELHALSQVSAARQLYTLFKRMLDRGDIQRSDVVARVQGI AKDLGNPKSPTSKALTFIPSMQFLP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ImpE3-PB | 325 | CG2723-PB | 1..325 | 1..325 | 1686 | 100 | Plus |