BDGP Sequence Production Resources |
Search the DGRC for LD12022
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 120 |
Well: | 22 |
Vector: | pBS SK- |
Associated Gene/Transcript | pie-RA |
Protein status: | LD12022.pep: gold |
Preliminary Size: | 1827 |
Sequenced Size: | 1964 |
Gene | Date | Evidence |
---|---|---|
CG5354 | 2001-01-01 | Release 2 assignment |
CG5354 | 2001-10-10 | Blastp of sequenced clone |
pie | 2008-04-29 | Release 5.5 accounting |
pie | 2008-08-15 | Release 5.9 accounting |
pie | 2008-12-18 | 5.12 accounting |
1964 bp (1964 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061141
> LD12022.complete ATAGTTTTAAAAATTATTCATAATAGCACTCAAACGAGTTGATCTGTCCA GCAAAACTAGTCTGAGCGGCCAGCTTACAAATGGAAGATAACAAGGAGCT GCAATGCTTAATATGCAAATATTCGGACACTGACGACCTGGTCTTTGGCG AATGGATGATTGTACGCAATTTGCAGGTGCACTATTTTTGCCTGCTACTC TCAACGCATTTGCCGCAGCGCGGCGGAGATAGCAGTGGAATCCTGGGATT TCTGCTTCGCGATATCCGCGAGGAGGCAGCCGCCGCGGAGAAGAGGAAAT GTTGGTACTGCAATAAGATTGGGGCCAGTTTGCAATGCGATCGTTGCCGG TCATTGTTTCACCTGAAGTGCGGCCTGGAGAATCGCGCCGTTTTCGAGTT CTGCGGCCAATACAAAAGCTACTGCTACAAATGCAGGCCGATGGATGACT ACAAGCGACAGCTGCAGTCGAATCCGCCGAGGAACGCCACTTGCCCCATC TGCTTCAGTTCCATCTATAAGGTAGAGCTGCATTGCGTTGTGTACGGTGA CTGCTGCCGCCTCGGATTCGCCCATAAGAAATGCATGCGTCAGTACGCTC TGACCTCCGGATATTACTTGCGTTGCATTTGGTGTCGTTCGGAACGTTTC AGGGATTCCATACGCCTGCAGTCGGTATTCGTGCCCGATCGCGATGCCAC GTGGGAGAAGCAACGGAACGCCTATAGGGAGCTCCACGAGCGCAATCTGA AATGCGACCAGCCCAACTGCCTGTGCCCCAGTGGTAGAACTTATAATAGA TTATCGTGGGTGATACTATGCTGCAGTTCTTGTGCCGCCACTTCGGCTCA TCTTAAATGCTTGGTGGGCGCCCTGCGACTGCCGAAGAAGCGCGAGCGTA CAGATTTCAAGTGCTCTATGTGCCTGGACGTGGAGAGGAGGATTGCTGAA GGACCGGCTCGCACAACAGAAGAAACCAATGCTGACGGCGACAACCAGGT GGATGGCTCTTTTTATGTGCAAAAATTGGGACCCGATGCTGCAACTCGAT CCTTAACCCAGACTCCTGTTTTCTCCGAAGAAGACGAAAGCGAACGAAGT AGTAATATCACGGTTATATTCAGCCAACCGAAATCTAACGCAACAAGCGA GAGGTTATCCTTATCGCCGCCACAGGAGGAGATGATAGTGGAAATTCCTG ATTCGCCAGAGGCGTCGCCAAAGACGTCCATCGATGAGAACCACTCGCCG CAGCCAATAGCAAGAAGGGACACATCCGACTCACCACAGCCAATAGCAGC AAGTGAGATCCCCGACTCACCGCAGCCAACAGCAGCAAGTGAGATCCCCG ACTTACCGCAGACAACAGCAATAAACGTAAACCCTGAATTAACGCAGCAA ACAGCATTAAACACGATTCCACACTCACCGCAGCCAGAAGCCAGCTTCTC AACGCAGCTAGTATCACAAACTTTCGATTGTCCACAGCCGCAGGAACAAG CTGTGGCGAAAGCTCCCAACTCACCGTCACTGCCGAAAGAGGATCCAAAT ACTTTACTTGTGCTAAAATCGGGCTTTCAATGCCCTGGCGAACCATTTTT CTACTTGGTTATCTACGAATTTGAGCACGGCACATGCATGGGTGAGTGCA TTGGTACGTGTGTGCTGCGATTTAAAGAGGATGACCCGCGCATTCAGGAC ACCTCGCAGGCAGCTTTGGAACGCGTCAACATAACACCAGACGATGTATG GTGCCGCAGCGAGGACCGCGGCATCTTTGAGCATATCGAGAAGTTCCACG AATGGTACAGATCAGAGGGGTTCTCTTAAATATTGTTTAAAACAATTCTT AATGTTCTTAATGTTTTAAACAATTCTCTTGTGTGGGAATTAATTCGTCA TAGAATTCTAGTCTCTTTATGCATATATTGTTTCGCATGATCATCCAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pie-RA | 2019 | pie-RA | 72..2019 | 1..1948 | 9740 | 100 | Plus |
pie.a | 1945 | pie.a | 59..1396 | 1..1338 | 6690 | 100 | Plus |
pie.a | 1945 | pie.a | 1393..1945 | 1394..1946 | 2750 | 99.8 | Plus |
pie.a | 1945 | pie.a | 1301..1392 | 1279..1370 | 265 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10419561..10421294 | 1946..194 | 8430 | 98.9 | Minus |
chr2L | 23010047 | chr2L | 10421361..10421554 | 194..1 | 970 | 100 | Minus |
chr2L | 23010047 | chr2L | 10420076..10420209 | 1376..1243 | 280 | 80.6 | Minus |
chr2L | 23010047 | chr2L | 10420112..10420245 | 1412..1279 | 280 | 80.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10420695..10422463 | 1962..194 | 8845 | 100 | Minus |
2L | 23513712 | 2L | 10422530..10422723 | 194..1 | 970 | 100 | Minus |
2L | 23513712 | 2L | 10421245..10421378 | 1376..1243 | 280 | 80.6 | Minus |
2L | 23513712 | 2L | 10421281..10421414 | 1412..1279 | 280 | 80.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10419561..10419643 | 1864..1946 | 100 | == | Minus |
chr2L | 10419644..10421293 | 195..1844 | 99 | <- | Minus |
chr2L | 10421361..10421554 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pie-RA | 1..1749 | 81..1829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pie-RA | 1..1749 | 81..1829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pie-RA | 1..1749 | 81..1829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pie-RA | 1..1749 | 81..1829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pie-RA | 1..1749 | 81..1829 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pie-RA | 33..1978 | 1..1946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pie-RA | 59..2004 | 1..1946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pie-RA | 58..2003 | 1..1946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pie-RA | 33..1978 | 1..1946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pie-RA | 58..2003 | 1..1946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10420711..10422462 | 195..1946 | 100 | <- | Minus |
2L | 10422530..10422723 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10420711..10422462 | 195..1946 | 100 | <- | Minus |
2L | 10422530..10422723 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10420711..10422462 | 195..1946 | 100 | <- | Minus |
2L | 10422530..10422723 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10420711..10422462 | 195..1946 | 100 | <- | Minus |
arm_2L | 10422530..10422723 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10420711..10422462 | 195..1946 | 100 | <- | Minus |
2L | 10422530..10422723 | 1..194 | 100 | Minus |
Translation from 80 to 1828
> LD12022.pep MEDNKELQCLICKYSDTDDLVFGEWMIVRNLQVHYFCLLLSTHLPQRGGD SSGILGFLLRDIREEAAAAEKRKCWYCNKIGASLQCDRCRSLFHLKCGLE NRAVFEFCGQYKSYCYKCRPMDDYKRQLQSNPPRNATCPICFSSIYKVEL HCVVYGDCCRLGFAHKKCMRQYALTSGYYLRCIWCRSERFRDSIRLQSVF VPDRDATWEKQRNAYRELHERNLKCDQPNCLCPSGRTYNRLSWVILCCSS CAATSAHLKCLVGALRLPKKRERTDFKCSMCLDVERRIAEGPARTTEETN ADGDNQVDGSFYVQKLGPDAATRSLTQTPVFSEEDESERSSNITVIFSQP KSNATSERLSLSPPQEEMIVEIPDSPEASPKTSIDENHSPQPIARRDTSD SPQPIAASEIPDSPQPTAASEIPDLPQTTAINVNPELTQQTALNTIPHSP QPEASFSTQLVSQTFDCPQPQEQAVAKAPNSPSLPKEDPNTLLVLKSGFQ CPGEPFFYLVIYEFEHGTCMGECIGTCVLRFKEDDPRIQDTSQAALERVN ITPDDVWCRSEDRGIFEHIEKFHEWYRSEGFS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16590-PA | 441 | GF16590-PA | 14..351 | 15..364 | 911 | 48.4 | Plus |
Dana\GF20450-PA | 541 | GF20450-PA | 4..278 | 9..293 | 398 | 32.7 | Plus |
Dana\GF16590-PA | 441 | GF16590-PA | 344..431 | 480..567 | 161 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23932-PA | 549 | GG23932-PA | 1..549 | 1..582 | 2415 | 78.7 | Plus |
Dere\GG18009-PA | 556 | GG18009-PA | 4..272 | 8..284 | 405 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12666-PA | 481 | GH12666-PA | 21..400 | 18..411 | 995 | 49.6 | Plus |
Dgri\GH24325-PA | 437 | GH24325-PA | 2..283 | 7..304 | 355 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pie-PB | 582 | CG5354-PB | 1..582 | 1..582 | 3161 | 100 | Plus |
pie-PA | 582 | CG5354-PA | 1..582 | 1..582 | 3161 | 100 | Plus |
Phf7-PC | 520 | CG9576-PC | 5..358 | 9..360 | 421 | 28.8 | Plus |
Phf7-PB | 520 | CG9576-PB | 5..358 | 9..360 | 421 | 28.8 | Plus |
Phf7-PA | 520 | CG9576-PA | 5..358 | 9..360 | 421 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16245-PA | 489 | GI16245-PA | 16..486 | 16..574 | 1115 | 41.8 | Plus |
Dmoj\GI14805-PA | 554 | GI14805-PA | 3..254 | 8..262 | 362 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15172-PA | 469 | GL15172-PA | 1..461 | 26..570 | 1134 | 43 | Plus |
Dper\GL12919-PA | 463 | GL12919-PA | 2..256 | 7..263 | 394 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22797-PA | 469 | GA22797-PA | 1..461 | 26..570 | 1124 | 42.9 | Plus |
Dpse\GA21886-PA | 463 | GA21886-PA | 2..256 | 7..263 | 382 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11670-PA | 480 | GM11670-PA | 1..407 | 1..407 | 2079 | 94.3 | Plus |
Dsec\GM11670-PA | 480 | GM11670-PA | 300..480 | 398..582 | 409 | 47.2 | Plus |
Dsec\GM22690-PA | 523 | GM22690-PA | 3..258 | 7..262 | 392 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22259-PA | 519 | GD22259-PA | 1..519 | 1..582 | 2525 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16710-PA | 487 | GJ16710-PA | 3..398 | 8..381 | 1042 | 51.4 | Plus |
Dvir\GJ19472-PA | 537 | GJ19472-PA | 3..252 | 8..260 | 362 | 33.8 | Plus |
Dvir\GJ16710-PA | 487 | GJ16710-PA | 327..484 | 406..572 | 167 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19966-PA | 459 | GK19966-PA | 6..372 | 9..369 | 939 | 49.5 | Plus |
Dwil\GK16334-PA | 515 | GK16334-PA | 2..256 | 7..260 | 378 | 33.8 | Plus |
Dwil\GK19966-PA | 459 | GK19966-PA | 348..445 | 470..557 | 192 | 42 | Plus |
Translation from 80 to 1828
> LD12022.hyp MEDNKELQCLICKYSDTDDLVFGEWMIVRNLQVHYFCLLLSTHLPQRGGD SSGILGFLLRDIREEAAAAEKRKCWYCNKIGASLQCDRCRSLFHLKCGLE NRAVFEFCGQYKSYCYKCRPMDDYKRQLQSNPPRNATCPICFSSIYKVEL HCVVYGDCCRLGFAHKKCMRQYALTSGYYLRCIWCRSERFRDSIRLQSVF VPDRDATWEKQRNAYRELHERNLKCDQPNCLCPSGRTYNRLSWVILCCSS CAATSAHLKCLVGALRLPKKRERTDFKCSMCLDVERRIAEGPARTTEETN ADGDNQVDGSFYVQKLGPDAATRSLTQTPVFSEEDESERSSNITVIFSQP KSNATSERLSLSPPQEEMIVEIPDSPEASPKTSIDENHSPQPIARRDTSD SPQPIAASEIPDSPQPTAASEIPDLPQTTAINVNPELTQQTALNTIPHSP QPEASFSTQLVSQTFDCPQPQEQAVAKAPNSPSLPKEDPNTLLVLKSGFQ CPGEPFFYLVIYEFEHGTCMGECIGTCVLRFKEDDPRIQDTSQAALERVN ITPDDVWCRSEDRGIFEHIEKFHEWYRSEGFS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pie-PB | 582 | CG5354-PB | 1..582 | 1..582 | 3161 | 100 | Plus |
pie-PA | 582 | CG5354-PA | 1..582 | 1..582 | 3161 | 100 | Plus |
Phf7-PC | 520 | CG9576-PC | 5..358 | 9..360 | 421 | 28.8 | Plus |
Phf7-PB | 520 | CG9576-PB | 5..358 | 9..360 | 421 | 28.8 | Plus |
Phf7-PA | 520 | CG9576-PA | 5..358 | 9..360 | 421 | 28.8 | Plus |