Clone LD12055 Report

Search the DGRC for LD12055

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:120
Well:55
Vector:pBS SK-
Associated Gene/TranscriptRhp-RA
Protein status:LD12055.pep: gold
Preliminary Size:2311
Sequenced Size:2404

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8497 2003-01-01 Sim4 clustering to Release 3
CG8497 2005-01-26 Blastp of sequenced clone
Rhp 2008-04-29 Release 5.5 accounting
Rhp 2008-08-15 Release 5.9 accounting
Rhp 2008-12-18 5.12 accounting

Clone Sequence Records

LD12055.complete Sequence

2404 bp (2404 high quality bases) assembled on 2005-01-26

GenBank Submission: BT021401

> LD12055.complete
ATAACCAGTTTGAGACTTTACGGTGGTTCGGAAACTCGTATCTGGCGCTT
CGGTTGTCCAAAAAGTCCTTTTGGATCATAATCATTTCGGATTTCGGATC
TTTGAACCATGGATGAAAAGGAACACGAATTGTCGACGAGGGTGGTGAAA
AACGAGGAGAACGAGGATGACGAGAAGCTCAATGAGTTATCCTTTTGTTT
TGTTCGGGGTTCAGATCCACGAGCTGCCACTTGTCGTAGCAAACTCCAAA
ACAGGCGATGCAAATTAAACAAAGAAATAAATAAGGAACTCCGCCTTCGA
GCTGGTGCCGAGAATCTATATAAGGCCACATCGAATCGCAAACTGCGCGA
CACAGTTGCCTTGGAATTAAGCTTTGTCAACTCAAATCTGCAACTGCTGA
AGGAGCAACTGGCCGAGTTGAATTCGTCGGTGGAAATCTATCAGAGCGAA
AGTCACAATGGAATTATGCCCATGATACCGCTGGGCCTGAAGGAAACCAA
GGAGATCAATTTCATGGAACCCTTCTCCGACTTCATCCTGGAACACTACA
GCGAGGAGCCCTCGATGTACATAGATGCCATAGCTGATATGACGGACACG
AGACAGGCATCCAAAACACCGTCACGAGATGCCCTGGGAGTGGCCCTACT
TTTCCGCTACTACAACACGCTGTATTACGTGGAGCGTCGCTTCTTTCCGC
CGGATCGTAACCTGGGCGTGTACTTCGAGTGGTACGACTCGCTCACGGGA
GTTCCCTCGTGCCAGCGGACCATCGCGTTCGAGAAAGCCTGCACCCTGTT
CAATCTGGGCGGCATATATACACAGATCGGCGCTCGACACGATCGCACGA
CGGAACGGGGTCTTGACTTGGCCGTGGATAGTTTTTTACGGGCCGCCGGG
GTCTTTCGTCACATCTACGATACGTTCACGAATGCACCATCGATGGACCT
GAAGCCACAGGTCCTGGACGTGCTCGTTTCCCTGATGCTTTCCCAGGCAC
GAGAATGCCTCTTTGAGAAGCTTCAGCTGCAGATCGAGGCGATGAGCCAC
GATTGCCAGGCGTTTCGGGATCTGGCTGGCGAGGCTGCTCAAATATCGCA
CGAGTACAATGAGATGCACAAGAATATCCAGGCGAACGATACGCACACCT
ATCTTCCGGAATGCTGGGCCGGTCTAGTGCCAGTCAAGGCGGAACTCTAC
AAAGCATTCGCACATTTCTACAAGGCACGGAGCATAGATGCGACAGACGA
GCTGAAGGCATCAAAGTCAAGTCAAAAGAACCAAGAATCCTTCATCGGCA
ATTCCCAGGAGGTGGAGCGCATCACCACAGCCGATTATGGAGCCAGCGAT
GAGGCGTCCACCTCCATTGCCAACAAACTGGCCCACTTAAAGGAGGCGCT
GGCCAGTATCGAGGAAGCCCAGCGATTGCAGCGGATGTGTCGGTTCTTGA
AGAACAAGGCATCACTGACTGAAGTCATGAAGGAGGTGCACTCCAAATCG
CAGGAGGAGCTCGAGAAGTTCAGACTGCAAGCTTCAGCCAAAAATATCGA
AGATGGCGATCTTCTAGAGCGATCGGTAGAAGCATCTTCGAAGTTCACGT
TATCCCTGACCGGACCCGACTTCACATCGCACAAGGTTAAGGATCCCTTC
AAGCGCCTCGGCCCGATTGCAATATTCTCGGCGAGACGCCACTGGACAGC
GCCCAGATGTGTGCGTCTCCAGAAAGGTTCCTCCCTGTATCACAGCGTGC
CCAGCAATGACAACAAGTGCCCATTGGATAACGATGATGACGAGGAGCAC
GATGGTGGATACAATCTGTACAAGGAGGAGTTTGAGAACTTTGGCTTCCA
TGTGCGCGGCGATGCTCCGGTGATCATTGCCCACGTTGAGATTAATTCTT
TGGCAGACCTTGGCGGCATCAAGGAGGGAGACTTCATAGTCGAGATAGCC
GGCGTGGACGTGAAGTGGTACTCCCATCAGCAGGTGGTGCAGCTCATACA
ATCCTGCGGCTCTACACTCGAGCTGAGAGTGATAACGCCCATGGATCGCA
ACTACTTGAAGCCATTGTCGTCGAAGGGCTCATTATCAACGCTATCGGCG
GCCAGTTCATCGGGCATTTCATCCGGATTTCCCAGTCCCACAAGTATTGC
GGCCAAGCCCAAGCTCCACCTGAAAACATCCTCTAGTTCGCGACCCGCTG
GCAGCGTTTCATCCAGTTCGTGGAATCCGTTTCGGCGAACGCCTAGCTTA
GCTAAAATATTTTAAGTAGCCATCAGTTTTTATTTTGTGTTTTATTTTTT
TGCTCTTAAGGCAATGGCCATTTCAAGTTAAAAAGAATGTTGTGCAGTTT
AAGTTAAGCAATAAACTTAATGATTTTTTAAAAGCCAAAAAAAAAAAAAA
AAAA

LD12055.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:44:47
Subject Length Description Subject Range Query Range Score Percent Strand
Rhp-RB 2672 Rhp-RB 237..2557 65..2386 11570 99.9 Plus
Rhp.a 2705 Rhp.a 1253..2590 1048..2386 6655 99.9 Plus
Rhp.a 2705 Rhp.a 237..1219 65..1047 4915 100 Plus
Rhp.b 2759 Rhp.b 237..1219 65..1047 4915 100 Plus
Rhp.b 2759 Rhp.b 1253..2113 1048..1908 4305 100 Plus
Rhp.b 2759 Rhp.b 2168..2644 1909..2386 2350 99.7 Plus
Rhp-RB 2672 Rhp-RB 18..82 1..65 325 100 Plus
Rhp.a 2705 Rhp.a 18..82 1..65 325 100 Plus
Rhp.b 2759 Rhp.b 18..82 1..65 325 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:03:30
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 15681326..15681768 605..1047 2170 99.3 Plus
chrX 22417052 chrX 15682569..15682896 1581..1908 1640 100 Plus
chrX 22417052 chrX 15683166..15683491 2060..2386 1585 99.7 Plus
chrX 22417052 chrX 15682067..15682316 1203..1452 1250 100 Plus
chrX 22417052 chrX 15681107..15681263 451..607 785 100 Plus
chrX 22417052 chrX 15681847..15682003 1048..1204 785 100 Plus
chrX 22417052 chrX 15682951..15683103 1909..2061 765 100 Plus
chrX 22417052 chrX 15680111..15680255 64..208 710 99.3 Plus
chrX 22417052 chrX 15682369..15682506 1445..1582 675 99.3 Plus
chrX 22417052 chrX 15680843..15680972 323..452 650 100 Plus
chrX 22417052 chrX 15680608..15680726 207..325 595 100 Plus
chrX 22417052 chrX 15686438..15686552 1284..1398 515 96.5 Plus
chrX 22417052 chrX 15678757..15678821 1..65 325 100 Plus
chrX 22417052 chrX 15686681..15686730 2329..2379 205 98 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:59:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15791460..15791902 605..1047 2215 100 Plus
X 23542271 X 15792710..15793037 1581..1908 1640 100 Plus
X 23542271 X 15793307..15793632 2060..2386 1585 99.7 Plus
X 23542271 X 15792208..15792457 1203..1452 1250 100 Plus
X 23542271 X 15791241..15791397 451..607 785 100 Plus
X 23542271 X 15791988..15792144 1048..1204 785 100 Plus
X 23542271 X 15793092..15793244 1909..2061 765 100 Plus
X 23542271 X 15790245..15790389 64..208 725 100 Plus
X 23542271 X 15792510..15792647 1445..1582 675 99.3 Plus
X 23542271 X 15790977..15791106 323..452 650 100 Plus
X 23542271 X 15790742..15790860 207..325 595 100 Plus
X 23542271 X 15796579..15796693 1284..1398 515 96.5 Plus
X 23542271 X 15788893..15788957 1..65 325 100 Plus
X 23542271 X 15796822..15796871 2329..2379 205 98 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:34:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 15799558..15800000 605..1047 2215 100 Plus
X 23527363 X 15800808..15801135 1581..1908 1640 100 Plus
X 23527363 X 15801405..15801730 2060..2386 1595 99.6 Plus
X 23527363 X 15800306..15800555 1203..1452 1250 100 Plus
X 23527363 X 15800086..15800242 1048..1204 785 100 Plus
X 23527363 X 15799339..15799495 451..607 785 100 Plus
X 23527363 X 15801190..15801342 1909..2061 765 100 Plus
X 23527363 X 15798343..15798487 64..208 725 100 Plus
X 23527363 X 15800608..15800745 1445..1582 675 99.2 Plus
X 23527363 X 15799075..15799204 323..452 650 100 Plus
X 23527363 X 15798840..15798958 207..325 595 100 Plus
X 23527363 X 15804677..15804791 1284..1398 515 96.5 Plus
X 23527363 X 15796991..15797055 1..65 325 100 Plus
X 23527363 X 15804920..15804969 2329..2379 215 98 Plus
X 23527363 X 15804788..15804815 1555..1582 140 100 Plus
Blast to na_te.dros performed on 2019-03-16 00:03:29 has no hits.

LD12055.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:04:25 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 15678757..15678821 1..65 100 -> Plus
chrX 15680113..15680254 66..207 99 -> Plus
chrX 15680609..15680725 208..324 100 -> Plus
chrX 15680845..15680972 325..452 100 -> Plus
chrX 15681109..15681262 453..606 100 -> Plus
chrX 15681328..15681768 607..1047 99 -> Plus
chrX 15681847..15682003 1048..1204 100 -> Plus
chrX 15682069..15682316 1205..1452 100 -> Plus
chrX 15682377..15682506 1453..1582 100 -> Plus
chrX 15682571..15682896 1583..1908 100 -> Plus
chrX 15682951..15683103 1909..2061 100 -> Plus
chrX 15683168..15683491 2062..2386 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:46:01 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
Rhp-RA 1..2157 109..2265 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:13:35 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
Rhp-RA 1..2157 109..2265 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:54:55 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
Rhp-RB 1..2157 109..2265 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:58:04 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
Rhp-RA 1..2157 109..2265 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:56:57 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
Rhp-RB 1..2157 109..2265 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:09:59 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
Rhp-RA 1..2385 1..2386 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:13:35 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
Rhp-RA 1..2385 1..2386 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:54:55 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
Rhp-RA 1..2381 5..2386 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:58:04 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
Rhp-RA 1..2385 1..2386 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:56:57 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
Rhp-RA 1..2381 5..2386 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:04:25 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
X 15793092..15793244 1909..2061 100 -> Plus
X 15792712..15793037 1583..1908 100 -> Plus
X 15788893..15788957 1..65 100 -> Plus
X 15790247..15790388 66..207 100 -> Plus
X 15790743..15790859 208..324 100 -> Plus
X 15790979..15791106 325..452 100 -> Plus
X 15791243..15791396 453..606 100 -> Plus
X 15791462..15791902 607..1047 100 -> Plus
X 15791988..15792144 1048..1204 100 -> Plus
X 15792210..15792457 1205..1452 100 -> Plus
X 15792518..15792647 1453..1582 100 -> Plus
X 15793309..15793632 2062..2386 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:04:25 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
X 15793092..15793244 1909..2061 100 -> Plus
X 15792712..15793037 1583..1908 100 -> Plus
X 15788893..15788957 1..65 100 -> Plus
X 15790247..15790388 66..207 100 -> Plus
X 15790743..15790859 208..324 100 -> Plus
X 15790979..15791106 325..452 100 -> Plus
X 15791243..15791396 453..606 100 -> Plus
X 15791462..15791902 607..1047 100 -> Plus
X 15791988..15792144 1048..1204 100 -> Plus
X 15792210..15792457 1205..1452 100 -> Plus
X 15792518..15792647 1453..1582 100 -> Plus
X 15793309..15793632 2062..2386 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:04:25 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
X 15793092..15793244 1909..2061 100 -> Plus
X 15792712..15793037 1583..1908 100 -> Plus
X 15788893..15788957 1..65 100 -> Plus
X 15790247..15790388 66..207 100 -> Plus
X 15790743..15790859 208..324 100 -> Plus
X 15790979..15791106 325..452 100 -> Plus
X 15791243..15791396 453..606 100 -> Plus
X 15791462..15791902 607..1047 100 -> Plus
X 15791988..15792144 1048..1204 100 -> Plus
X 15792210..15792457 1205..1452 100 -> Plus
X 15792518..15792647 1453..1582 100 -> Plus
X 15793309..15793632 2062..2386 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:54:55 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15682926..15682990 1..65 100 -> Plus
arm_X 15684280..15684421 66..207 100 -> Plus
arm_X 15684776..15684892 208..324 100 -> Plus
arm_X 15685012..15685139 325..452 100 -> Plus
arm_X 15685276..15685429 453..606 100 -> Plus
arm_X 15685495..15685935 607..1047 100 -> Plus
arm_X 15686021..15686177 1048..1204 100 -> Plus
arm_X 15686243..15686490 1205..1452 100 -> Plus
arm_X 15686551..15686680 1453..1582 100 -> Plus
arm_X 15686745..15687070 1583..1908 100 -> Plus
arm_X 15687125..15687277 1909..2061 100 -> Plus
arm_X 15687342..15687665 2062..2386 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:33:33 Download gff for LD12055.complete
Subject Subject Range Query Range Percent Splice Strand
X 15799560..15800000 607..1047 100 -> Plus
X 15800086..15800242 1048..1204 100 -> Plus
X 15800308..15800555 1205..1452 100 -> Plus
X 15800616..15800745 1453..1582 100 -> Plus
X 15800810..15801135 1583..1908 100 -> Plus
X 15801190..15801342 1909..2061 100 -> Plus
X 15801407..15801730 2062..2386 99   Plus
X 15796991..15797055 1..65 100 -> Plus
X 15798345..15798486 66..207 100 -> Plus
X 15798841..15798957 208..324 100 -> Plus
X 15799077..15799204 325..452 100 -> Plus
X 15799341..15799494 453..606 100 -> Plus

LD12055.pep Sequence

Translation from 108 to 2264

> LD12055.pep
MDEKEHELSTRVVKNEENEDDEKLNELSFCFVRGSDPRAATCRSKLQNRR
CKLNKEINKELRLRAGAENLYKATSNRKLRDTVALELSFVNSNLQLLKEQ
LAELNSSVEIYQSESHNGIMPMIPLGLKETKEINFMEPFSDFILEHYSEE
PSMYIDAIADMTDTRQASKTPSRDALGVALLFRYYNTLYYVERRFFPPDR
NLGVYFEWYDSLTGVPSCQRTIAFEKACTLFNLGGIYTQIGARHDRTTER
GLDLAVDSFLRAAGVFRHIYDTFTNAPSMDLKPQVLDVLVSLMLSQAREC
LFEKLQLQIEAMSHDCQAFRDLAGEAAQISHEYNEMHKNIQANDTHTYLP
ECWAGLVPVKAELYKAFAHFYKARSIDATDELKASKSSQKNQESFIGNSQ
EVERITTADYGASDEASTSIANKLAHLKEALASIEEAQRLQRMCRFLKNK
ASLTEVMKEVHSKSQEELEKFRLQASAKNIEDGDLLERSVEASSKFTLSL
TGPDFTSHKVKDPFKRLGPIAIFSARRHWTAPRCVRLQKGSSLYHSVPSN
DNKCPLDNDDDEEHDGGYNLYKEEFENFGFHVRGDAPVIIAHVEINSLAD
LGGIKEGDFIVEIAGVDVKWYSHQQVVQLIQSCGSTLELRVITPMDRNYL
KPLSSKGSLSTLSAASSSGISSGFPSPTSIAAKPKLHLKTSSSSRPAGSV
SSSSWNPFRRTPSLAKIF*

LD12055.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:59:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20187-PA 486 GF20187-PA 1..483 120..654 1721 62.8 Plus
Dana\GF18695-PA 836 GF18695-PA 9..296 127..392 175 22.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17916-PA 716 GG17916-PA 1..716 1..718 3800 98.5 Plus
Dere\GG13708-PA 1835 GG13708-PA 9..191 122..304 175 26.9 Plus
Dere\GG12097-PA 836 GG12097-PA 9..296 127..392 170 21.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12211-PA 712 GH12211-PA 2..712 16..718 2951 81.2 Plus
Dgri\GH16984-PA 839 GH16984-PA 4..299 122..396 180 22.2 Plus
Dgri\GH16790-PA 1732 GH16790-PA 9..191 122..304 178 27.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
Rhp-PA 718 CG8497-PA 1..718 1..718 3695 100 Plus
Rhp-PB 718 CG8497-PB 1..718 1..718 3695 100 Plus
ALiX-PA 836 CG12876-PA 9..296 127..392 164 21.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:59:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15742-PA 715 GI15742-PA 6..715 16..718 2926 80.6 Plus
Dmoj\GI10741-PA 833 GI10741-PA 4..386 122..458 192 22.4 Plus
Dmoj\GI13450-PA 1859 GI13450-PA 9..191 122..304 162 25.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:59:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24798-PA 409 GL24798-PA 1..400 122..505 1479 70.6 Plus
Dper\GL15664-PA 259 GL15664-PA 1..250 403..654 874 67.3 Plus
Dper\GL15310-PA 63 GL15310-PA 1..60 34..93 287 91.7 Plus
Dper\GL13709-PA 833 GL13709-PA 9..198 127..301 165 23.4 Plus
Dper\GL26095-PA 1878 GL26095-PA 19..181 142..304 156 27.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:59:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21119-PA 698 GA21119-PA 1..698 34..718 2712 74.3 Plus
Dpse\GA11876-PA 841 GA11876-PA 9..296 127..392 166 21.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:59:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22583-PA 718 GM22583-PA 1..718 1..718 3834 99 Plus
Dsec\GM24530-PA 1821 GM24530-PA 9..191 122..304 182 26.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:59:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17246-PA 350 GD17246-PA 31..336 95..400 1655 99.3 Plus
Dsim\GD17244-PA 57 GD17244-PA 1..47 1..47 239 95.7 Plus
Dsim\GD12600-PA 1490 GD12600-PA 9..191 122..304 187 26.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:59:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18603-PA 734 GJ18603-PA 43..734 34..718 2896 82.2 Plus
Dvir\GJ10684-PA 835 GJ10684-PA 4..296 122..392 179 22.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:59:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10207-PA 769 GK10207-PA 46..769 19..718 2911 79.1 Plus
Dwil\GK10583-PA 1714 GK10583-PA 9..191 122..304 177 27.4 Plus
Dwil\GK11320-PA 843 GK11320-PA 4..201 122..304 165 22.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:59:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17224-PA 717 GE17224-PA 1..717 1..718 3813 98.6 Plus
Dyak\GE10546-PA 836 GE10546-PA 9..296 127..392 164 20.9 Plus

LD12055.hyp Sequence

Translation from 108 to 2264

> LD12055.hyp
MDEKEHELSTRVVKNEENEDDEKLNELSFCFVRGSDPRAATCRSKLQNRR
CKLNKEINKELRLRAGAENLYKATSNRKLRDTVALELSFVNSNLQLLKEQ
LAELNSSVEIYQSESHNGIMPMIPLGLKETKEINFMEPFSDFILEHYSEE
PSMYIDAIADMTDTRQASKTPSRDALGVALLFRYYNTLYYVERRFFPPDR
NLGVYFEWYDSLTGVPSCQRTIAFEKACTLFNLGGIYTQIGARHDRTTER
GLDLAVDSFLRAAGVFRHIYDTFTNAPSMDLKPQVLDVLVSLMLSQAREC
LFEKLQLQIEAMSHDCQAFRDLAGEAAQISHEYNEMHKNIQANDTHTYLP
ECWAGLVPVKAELYKAFAHFYKARSIDATDELKASKSSQKNQESFIGNSQ
EVERITTADYGASDEASTSIANKLAHLKEALASIEEAQRLQRMCRFLKNK
ASLTEVMKEVHSKSQEELEKFRLQASAKNIEDGDLLERSVEASSKFTLSL
TGPDFTSHKVKDPFKRLGPIAIFSARRHWTAPRCVRLQKGSSLYHSVPSN
DNKCPLDNDDDEEHDGGYNLYKEEFENFGFHVRGDAPVIIAHVEINSLAD
LGGIKEGDFIVEIAGVDVKWYSHQQVVQLIQSCGSTLELRVITPMDRNYL
KPLSSKGSLSTLSAASSSGISSGFPSPTSIAAKPKLHLKTSSSSRPAGSV
SSSSWNPFRRTPSLAKIF*

LD12055.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:26:42
Subject Length Description Subject Range Query Range Score Percent Strand
Rhp-PA 718 CG8497-PA 1..718 1..718 3695 100 Plus
Rhp-PB 718 CG8497-PB 1..718 1..718 3695 100 Plus
ALiX-PA 836 CG12876-PA 9..296 127..392 164 21.5 Plus