![]() | BDGP Sequence Production Resources |
Search the DGRC for LD12153
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 121 |
Well: | 53 |
Vector: | pBS SK- |
Associated Gene/Transcript | Dph5-RA |
Protein status: | LD12153.pep: gold |
Preliminary Size: | 1338 |
Sequenced Size: | 1156 |
Gene | Date | Evidence |
---|---|---|
CG5275 | 2001-01-01 | Release 2 assignment |
CG31289 | 2002-11-12 | Blastp of sequenced clone |
CG31289 | 2003-01-01 | Sim4 clustering to Release 3 |
Dph5 | 2008-04-29 | Release 5.5 accounting |
Dph5 | 2008-08-15 | Release 5.9 accounting |
Dph5 | 2008-12-18 | 5.12 accounting |
1156 bp (1156 high quality bases) assembled on 2002-11-12
GenBank Submission: AF160929
> LD12153.complete CGGCGGTCACACAACGCGCGACGGCACGTGTTGACTGCATTTAAAAAGCG ATTTTAATAACATTTGGCAGGAGTTGCAGTGGCCGAGCAGTCGCACCAGT CGCCCAGCATGTTCTACCTAATCGGCCTCGGCCTTGGCGACCTGAAGGAC ATCACGGTCAAGGGTCTGGAGATAGTGAAGCAATGCAGTCGCGTCTATCT GGAGATGTACACCTCGATTCTGGGCTGCAGCCTTGAGGATATGCAAGAGT TCTATGGACGACCACTGCTGCTAGCCGACCGCGATCTGGTGGAGCAGGGT GCGGATGAGATCCTGGCGGGTGCGGGCGAATCCGATGTTGCGCTGCTCGT GGTGGGCGACCCCTTTGGCGCCACCACCCACACAGACTTCATACTGCGCG CCAAGGAGAAGAACATCCCCTACAAGGTCATCCACAATGCATCGATCATG AACGCCGTCGGCTGCTGCGGCCTGCAATTGTACAAATTCGGCGAGACCGT TTCGATTCCGTACTGGGACGAGACATGGAAGCCGGACAGCTTCTACGACA AGATCAAGCTGAATCGCCTGCACAACATGCACACGCTGTGCCTGCTGGAC ATCAAGGTGAAGGAGCCCACGCCGGAGTCCTTGATGCGCAAACGCAAGGA GTACATGCCACCGCGTTTCATGACCGTGGCGGAGGCGGCTCATCAGTTGC TGTCCATTGTGGAGAAGAAGGACTCGCTGGAGAAGAACACAGTGCTCAAC GAGCAGTCACTGTGCGTTGGACTGGCCCGTGTTGGCCAGGAGTCGCAGCA GATTGCCGTTGGCACGCTGCTTGAGATGCGCTCGACCGATTTGGGCGGAC CGCTGCACTCGCTCATCATTCCCGCCAAGGAGATGCATCCGCTGGAGGTG GAGTTCTTGCAGCAGTATGCCCCCAGCATCAAGCTGGACGACTACAACCA CTAATTCCGCTGCGAAATTACCTAATTTAGTGTCTAGGAAATGTTGTCTG TGCATCTGAATTGAATTTACGAAGCAAGAGGAGCTGGAAGCTCAGGAAGA AAGTGATATCGCTTGATGCCACCCGTATACGTATGTAGCCTGCCCAGCGG CAGCTGAAATAAAACCGCATTCACCCATCGTAAAAAAAAAAAAAAAAAAA AAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18405564..18406451 | 244..1131 | 99 | <- | Minus |
chr3R | 18406522..18406764 | 1..243 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dph5-RA | 1..846 | 109..954 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dph5-RA | 1..846 | 109..954 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dph5-RA | 1..846 | 109..954 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dph5-RA | 1..846 | 109..954 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dph5-RA | 1..846 | 109..954 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dph5-RA | 1..1131 | 1..1131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dph5-RA | 1..1131 | 1..1131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dph5-RA | 1..1128 | 4..1131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dph5-RA | 1..1131 | 1..1131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dph5-RA | 1..1128 | 4..1131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22582028..22582915 | 244..1131 | 100 | <- | Minus |
3R | 22582986..22583228 | 1..243 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22582028..22582915 | 244..1131 | 100 | <- | Minus |
3R | 22582986..22583228 | 1..243 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22582028..22582915 | 244..1131 | 100 | <- | Minus |
3R | 22582986..22583228 | 1..243 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18407750..18408637 | 244..1131 | 100 | <- | Minus |
arm_3R | 18408708..18408950 | 1..243 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22322859..22323746 | 244..1131 | 100 | <- | Minus |
3R | 22323817..22324059 | 1..243 | 100 | Minus |
Translation from 108 to 953
> LD12153.pep MFYLIGLGLGDLKDITVKGLEIVKQCSRVYLEMYTSILGCSLEDMQEFYG RPLLLADRDLVEQGADEILAGAGESDVALLVVGDPFGATTHTDFILRAKE KNIPYKVIHNASIMNAVGCCGLQLYKFGETVSIPYWDETWKPDSFYDKIK LNRLHNMHTLCLLDIKVKEPTPESLMRKRKEYMPPRFMTVAEAAHQLLSI VEKKDSLEKNTVLNEQSLCVGLARVGQESQQIAVGTLLEMRSTDLGGPLH SLIIPAKEMHPLEVEFLQQYAPSIKLDDYNH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16145-PA | 281 | GF16145-PA | 1..281 | 1..281 | 1483 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12504-PA | 281 | GG12504-PA | 1..281 | 1..281 | 1493 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18052-PA | 281 | GH18052-PA | 1..281 | 1..281 | 1417 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dph5-PA | 281 | CG31289-PA | 1..281 | 1..281 | 1461 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10523-PA | 281 | GI10523-PA | 1..281 | 1..281 | 1434 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13679-PA | 281 | GL13679-PA | 1..281 | 1..281 | 1464 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16151-PA | 281 | GA16151-PA | 1..281 | 1..281 | 1461 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23636-PA | 281 | GM23636-PA | 1..281 | 1..281 | 1487 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18446-PA | 281 | GD18446-PA | 1..281 | 1..281 | 1493 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24174-PA | 281 | GJ24174-PA | 1..281 | 1..281 | 1422 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11785-PA | 281 | GK11785-PA | 1..281 | 1..281 | 1447 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Dph5-PA | 281 | GE24024-PA | 1..281 | 1..281 | 1493 | 99.6 | Plus |
Translation from 108 to 953
> LD12153.hyp MFYLIGLGLGDLKDITVKGLEIVKQCSRVYLEMYTSILGCSLEDMQEFYG RPLLLADRDLVEQGADEILAGAGESDVALLVVGDPFGATTHTDFILRAKE KNIPYKVIHNASIMNAVGCCGLQLYKFGETVSIPYWDETWKPDSFYDKIK LNRLHNMHTLCLLDIKVKEPTPESLMRKRKEYMPPRFMTVAEAAHQLLSI VEKKDSLEKNTVLNEQSLCVGLARVGQESQQIAVGTLLEMRSTDLGGPLH SLIIPAKEMHPLEVEFLQQYAPSIKLDDYNH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dph5-PA | 281 | CG31289-PA | 1..281 | 1..281 | 1461 | 100 | Plus |