BDGP Sequence Production Resources |
Search the DGRC for LD12604
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 126 |
Well: | 4 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG40191-RA |
Protein status: | LD12604.pep: gold |
Preliminary Size: | 1586 |
Sequenced Size: | 1538 |
Gene | Date | Evidence |
---|---|---|
CG17676 | 2002-01-01 | Sim4 clustering to Release 2 |
CG40191 | 2002-05-10 | Blastp of sequenced clone |
CG40191 | 2003-01-01 | Sim4 clustering to Release 3 |
CG40191 | 2008-04-29 | Release 5.5 accounting |
CG40191 | 2008-08-15 | Release 5.9 accounting |
CG40191 | 2008-12-18 | 5.12 accounting |
1538 bp (1538 high quality bases) assembled on 2002-05-10
GenBank Submission: AY102674
> LD12604.complete AGACAGCTTACAAAACAAAAAATCGAAAACTTGGGGTTTGAATTAAACAT TTAATAGTCAATTATTTCTATTTGGCATATCCCTTTTTAGTTTTTACTGC GCTTGGTAACGCCTAATGGTGTGCATTACCATACAAAAATTGTATGAACT AAAAAAGAGTGTTTCTCTTCTCATCGTTTCTAAAAACCTCTGCATGGTAA TGCCGGCAGCTTGACGATTTTTTTAAAATTATTTATTTAGAAATGGGGCG ATTTAAGTTATGTGCTTCGCCGAGAGAGGTTATGAAGTACGAAGACTTTA TAAAACGCATTCGAAAAAGCCTCTACTATGGCGTTGGAACACCAGACACA GAAATGTCGGTCTCCTTACCCTTTGCGGAGTACGCGGCAGATTTGTTTTC GGAGACTCATCGCGGGCATTCTTTGCATCGCCTAAGTTGCGTATCTGCTG CACAAGTACATGCCACGCCTTGCTCTTTAATTATGGCATTGATATACCTC GATCGCTTAAACGTCATCGACTCGGGCTATAGCTGCAGAATCACACCACA GCAGCTGTTTGTTGTGTCACTAATGATTTCCACAAAATTCTACGCGGGCC ACGACGAACGGTTCTATCTGGAAGACTGGGCCAGTGACGCTTGTATGACG GAAGATAGGCTCAAGGCAGTCGAGCTCGAATTTCTTTCCGCTATGGGTTG GAATATATACATATCCAATGAGCTATTCTTTGATAAGTTAAGAAACGTTG AACGTTCTTTGGCTGAACAGCAGGGACTGCGTAGAGGTTGGCTCACTTAC AGTGAGCTCGTGCAGTTGCTGCCTAGCCTTGAATGGACGAAATTCCTCGT TAACAGCCTGTCTGTACTATCTCTAAGCTATGCGGCAAGTATTATAACAT TAGCCGGAGCTTTTTTTATTGCGAGCCAAGTTCCCGGTACGTTATGGCAT CGGGATGTGGAAACTGCCTCAGATTTCACCATGACAATTAGCAGTCAGGT ATCCGTTTCAAATGCATTAGAGTCCACACCTTTTATTAATGTCCAAGTAT CCTCACTTTTACGTAAAACGAGTAACGTGAATGTTGAATTGATGAATCTT GAGAAGACAAGCTGCGCCAGGGCAAGACTGAATAAAATTGAATATAAGCA TCCGCGCCATCAATCAGTACCTACGCTTTCATTCATAAGCACCTGTCCAC AACTTGATTTATTGTATGCCCAAGATGGAACAAGGAATTGGCTAAATATT AAATCGCCCAACAGCGACTACAAAAACAACAGAAACCTTTCAATAACAGT TAGATCCGTACAACTAGAAGAGCAAAAGGCTGAAAATGATTCCGTTATTT GGCAAGCCAACACCGAAGCAATGCAGTAATTGTTTTTACCGCAAAACTTA AAGAGGTGCTAACAACTGATATAAAATAAATATATTTATATTATATATAA TATCAATATAATAATATTGATAACAAATTAACCAAGCGTACGAGTAATAT AACATGCATAACAGTAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG40191-RC | 1524 | CG40191-RC | 1..1517 | 1..1517 | 7585 | 100 | Plus |
CG40191.e | 2168 | CG40191.e | 279..1455 | 229..1405 | 5885 | 100 | Plus |
CG40191-RD | 1704 | CG40191-RD | 279..1455 | 229..1405 | 5885 | 100 | Plus |
CG40191.e | 2168 | CG40191.e | 1..212 | 24..235 | 1030 | 99 | Plus |
CG40191-RD | 1704 | CG40191-RD | 1..212 | 24..235 | 1030 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2RHet | 3288813 | chr2RHet | 392020..392840 | 695..1515 | 4105 | 100 | Plus |
chr2RHet | 3288813 | chr2RHet | 391224..391519 | 277..572 | 1480 | 100 | Plus |
chr2RHet | 3288813 | chr2RHet | 390821..391055 | 1..235 | 1145 | 99.1 | Plus |
chr2RHet | 3288813 | chr2RHet | 391849..391972 | 573..696 | 620 | 100 | Plus |
chr2RHet | 3288813 | chr2RHet | 391122..391173 | 229..280 | 260 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 1265342..1266164 | 695..1517 | 4115 | 100 | Plus |
2R | 25286936 | 2R | 1264546..1264841 | 277..572 | 1480 | 100 | Plus |
2R | 25286936 | 2R | 1264143..1264377 | 1..235 | 1145 | 99.1 | Plus |
2R | 25286936 | 2R | 1265171..1265294 | 573..696 | 620 | 100 | Plus |
2R | 25286936 | 2R | 1264444..1264495 | 229..280 | 260 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 1265342..1266164 | 695..1517 | 4115 | 100 | Plus |
2R | 25260384 | 2R | 1264546..1264841 | 277..572 | 1480 | 100 | Plus |
2R | 25260384 | 2R | 1264143..1264377 | 1..235 | 1145 | 99.1 | Plus |
2R | 25260384 | 2R | 1265171..1265294 | 573..696 | 620 | 100 | Plus |
2R | 25260384 | 2R | 1264444..1264495 | 229..280 | 260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2RHet | 390821..391048 | 1..228 | 100 | -> | Plus |
chr2RHet | 391122..391171 | 229..278 | 100 | -> | Plus |
chr2RHet | 391226..391519 | 279..572 | 100 | -> | Plus |
chr2RHet | 391849..391971 | 573..695 | 100 | -> | Plus |
chr2RHet | 392021..392840 | 696..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RD | 1..1137 | 243..1379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RD | 1..1137 | 243..1379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RA | 1..1137 | 243..1379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RD | 1..1137 | 243..1379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RA | 1..1137 | 243..1379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RC | 1..1515 | 1..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RC | 1..1515 | 1..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RC | 4..1518 | 1..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RC | 1..1515 | 1..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RC | 4..1518 | 1..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 1264143..1264370 | 1..228 | 100 | -> | Plus |
2R | 1264444..1264493 | 229..278 | 100 | -> | Plus |
2R | 1264548..1264841 | 279..572 | 100 | -> | Plus |
2R | 1265171..1265293 | 573..695 | 100 | -> | Plus |
2R | 1265343..1266162 | 696..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 1264143..1264370 | 1..228 | 100 | -> | Plus |
2R | 1264444..1264493 | 229..278 | 100 | -> | Plus |
2R | 1264548..1264841 | 279..572 | 100 | -> | Plus |
2R | 1265171..1265293 | 573..695 | 100 | -> | Plus |
2R | 1265343..1266162 | 696..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 1264143..1264370 | 1..228 | 100 | -> | Plus |
2R | 1264444..1264493 | 229..278 | 100 | -> | Plus |
2R | 1264548..1264841 | 279..572 | 100 | -> | Plus |
2R | 1265171..1265293 | 573..695 | 100 | -> | Plus |
2R | 1265343..1266162 | 696..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2RHet | 390776..391003 | 1..228 | 100 | -> | Plus |
2RHet | 391077..391126 | 229..278 | 100 | -> | Plus |
2RHet | 391181..391474 | 279..572 | 100 | -> | Plus |
2RHet | 391804..391926 | 573..695 | 100 | -> | Plus |
2RHet | 391976..392795 | 696..1515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 1265171..1265293 | 573..695 | 100 | -> | Plus |
2R | 1264143..1264370 | 1..228 | 100 | -> | Plus |
2R | 1264444..1264493 | 229..278 | 100 | -> | Plus |
2R | 1264548..1264841 | 279..572 | 100 | -> | Plus |
2R | 1265343..1266162 | 696..1515 | 100 | Plus |
Translation from 242 to 1378
> LD12604.hyp MGRFKLCASPREVMKYEDFIKRIRKSLYYGVGTPDTEMSVSLPFAEYAAD LFSETHRGHSLHRLSCVSAAQVHATPCSLIMALIYLDRLNVIDSGYSCRI TPQQLFVVSLMISTKFYAGHDERFYLEDWASDACMTEDRLKAVELEFLSA MGWNIYISNELFFDKLRNVERSLAEQQGLRRGWLTYSELVQLLPSLEWTK FLVNSLSVLSLSYAASIITLAGAFFIASQVPGTLWHRDVETASDFTMTIS SQVSVSNALESTPFINVQVSSLLRKTSNVNVELMNLEKTSCARARLNKIE YKHPRHQSVPTLSFISTCPQLDLLYAQDGTRNWLNIKSPNSDYKNNRNLS ITVRSVQLEEQKAENDSVIWQANTEAMQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG40191-PC | 378 | CG40191-PC | 1..378 | 1..378 | 1941 | 100 | Plus |
CG40191-PD | 378 | CG40191-PD | 1..378 | 1..378 | 1941 | 100 | Plus |
CG40191-PA | 378 | CG40191-PA | 1..378 | 1..378 | 1941 | 100 | Plus |
CG40191-PB | 396 | CG40191-PB | 1..396 | 1..378 | 1912 | 95.5 | Plus |
CG40191-PE | 268 | CG40191-PE | 1..268 | 111..378 | 1371 | 100 | Plus |
Translation from 242 to 1378
> LD12604.pep MGRFKLCASPREVMKYEDFIKRIRKSLYYGVGTPDTEMSVSLPFAEYAAD LFSETHRGHSLHRLSCVSAAQVHATPCSLIMALIYLDRLNVIDSGYSCRI TPQQLFVVSLMISTKFYAGHDERFYLEDWASDACMTEDRLKAVELEFLSA MGWNIYISNELFFDKLRNVERSLAEQQGLRRGWLTYSELVQLLPSLEWTK FLVNSLSVLSLSYAASIITLAGAFFIASQVPGTLWHRDVETASDFTMTIS SQVSVSNALESTPFINVQVSSLLRKTSNVNVELMNLEKTSCARARLNKIE YKHPRHQSVPTLSFISTCPQLDLLYAQDGTRNWLNIKSPNSDYKNNRNLS ITVRSVQLEEQKAENDSVIWQANTEAMQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22743-PA | 446 | GF22743-PA | 76..431 | 13..378 | 1026 | 56.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10916-PA | 378 | GG10916-PA | 1..378 | 1..378 | 1698 | 84.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10974-PA | 406 | GH10974-PA | 6..389 | 3..377 | 931 | 52.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG40191-PC | 378 | CG40191-PC | 1..378 | 1..378 | 1941 | 100 | Plus |
CG40191-PD | 378 | CG40191-PD | 1..378 | 1..378 | 1941 | 100 | Plus |
CG40191-PA | 378 | CG40191-PA | 1..378 | 1..378 | 1941 | 100 | Plus |
CG40191-PB | 396 | CG40191-PB | 1..396 | 1..378 | 1912 | 95.5 | Plus |
CG40191-PE | 268 | CG40191-PE | 1..268 | 111..378 | 1371 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17487-PA | 396 | GI17487-PA | 1..379 | 1..377 | 1001 | 55.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26163-PA | 408 | GL26163-PA | 1..393 | 1..378 | 1111 | 56.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25313-PA | 408 | GA25313-PA | 1..393 | 1..378 | 1111 | 56.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24773-PA | 277 | GM24773-PA | 13..277 | 111..378 | 1261 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15142-PA | 378 | GD15142-PA | 1..378 | 1..378 | 1893 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15088-PA | 391 | GJ15088-PA | 2..374 | 12..377 | 979 | 55 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15339-PA | 388 | GK15339-PA | 17..372 | 12..342 | 1026 | 55.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15212-PA | 380 | GE15212-PA | 1..380 | 1..378 | 1666 | 81.6 | Plus |