BDGP Sequence Production Resources |
Search the DGRC for LD12611
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 126 |
Well: | 11 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG33099-RA |
Protein status: | LD12611.pep: gold |
Preliminary Size: | 1320 |
Sequenced Size: | 1249 |
Gene | Date | Evidence |
---|---|---|
CG5340 | 2001-01-01 | Release 2 assignment |
CG33099 | 2003-01-01 | Sim4 clustering to Release 3 |
CG33099 | 2008-12-18 | 5.12 accounting |
1249 bp assembled on 2008-08-28
GenBank Submission: BT044466.1
> LD12611.complete TTGTCGTGTTCACATCGTCTCTTCGGAGCTCTGAGTTTCCAGATAATTTT CAGAAGCAATCTATTTGTATTTGATTTACCTACGCGGGGCTTATTTACCA AGAATGATAAACAGCAAGATAAGAGAGGACAAGTTGGAAACACTTGTCTC GCGAAGTTCTGTGCCGATCATCGATCTTGCCCATTGTGGCAAGTCCCTTG TCCATCGGGTGGGTCAGCAACTCCACAAGGCTTTCACCGAAAAGGGAATT GCGTTTCTGGTTAACCATGGGATAGCAGAGGACAAGATCAAAGCTGTTTG GGATCAATTTGACAACTTCTTGGATCTGCCAGCAGAGGTTCAGGATCGTT ACAGACGAAAGGACGGTGTTAATTATGGATATGTTAGTCCCGGGATGGAG CGATTTGATGGAAGTACTCCAGAACTGCGTCACGCCTACAATGTTTGCAA ACTGGATGGACAGAATATTCCAAGGGAGGCACTGCCAGAATTTGCCGAAG GCATTACCACACTGTGCACGGATTTGAAAGCCATGTCTTTGTACATAATG AAGGCCATGGAGGTGGCCCTGGAGATTCCGCCGTCCTTCTTCATCGACAA ACACTCCCAGATGTTGGAAGGAGATGACCTAAACATGACCACCCTCAGGA TGCTCTACTATCCGGCGATTGTGGATGATGAGCCGGGCCAGAGCGAGGGT GCCATCCGTTGTGGTGCCCATGTGGACTACGGCACCTTCACGCTGCTCGC CCAGGATTCCGAAGGTGGCTTGGAGGTGCAATTGCCGGGCAGCGAAAAAT GGGAACGGGTGGGTCATTTACCTGGTGCCATACTTATAAACGGCGGGGAA CTTCTGTCCATCTGGACGAAGCAGCGTTACCACGCCCTGCCTCATCGCGT CGTCATACCTGAACAAGAACTTATAAGAACCCGTGGCAGACACTCCATAG CATATTTCTGCCATCCCAATAACTCGATCTTGATATCTCCCAACGATCTG TTGAGTGAAGGGGAGGCAAAGAGTGAGGACAAAGTATACAGCGCCTATGA ACTGATACAGAAAAAGTTTAATGACACCTACGGTCAGCGATCTCAATAAG TCAACGAATCTGGGGCAAAAGTTTATTACAGCTCTAGCCATATGAAAATC ATTAGCATTCTTAACCCAATAATGTAACTTCAGCAGCAATAATGAAATGT AATTGTTTGAATTTAATAAATTATAGCATTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33099-RA | 1305 | CG33099-RA | 30..1261 | 1..1232 | 6160 | 100 | Plus |
CG5346-RA | 2004 | CG5346-RA | 1288..1379 | 722..813 | 205 | 81.5 | Plus |
CG5346.a | 2357 | CG5346.a | 1288..1379 | 722..813 | 205 | 81.5 | Plus |
CG5346-RA | 2004 | CG5346-RA | 1048..1112 | 632..696 | 145 | 81.5 | Plus |
CG5346.a | 2357 | CG5346.a | 1048..1112 | 632..696 | 145 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 18352933..18353537 | 889..285 | 2965 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 18352468..18352666 | 1231..1033 | 980 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 18353910..18354103 | 194..1 | 955 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 18352728..18352871 | 1032..889 | 720 | 100 | Minus |
chr3R | 27901430 | chr3R | 18353587..18353685 | 286..188 | 495 | 100 | Minus |
chr3R | 27901430 | chr3R | 18344670..18344761 | 813..722 | 205 | 81.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 22529385..22529989 | 889..285 | 3025 | 100 | Minus |
3R | 32079331 | 3R | 22528919..22529118 | 1232..1033 | 1000 | 100 | Minus |
3R | 32079331 | 3R | 22530362..22530555 | 194..1 | 955 | 99.5 | Minus |
3R | 32079331 | 3R | 22529180..22529323 | 1032..889 | 720 | 100 | Minus |
3R | 32079331 | 3R | 22530039..22530137 | 286..188 | 495 | 100 | Minus |
3R | 32079331 | 3R | 22521111..22521202 | 813..722 | 205 | 81.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 22270216..22270820 | 889..285 | 3025 | 100 | Minus |
3R | 31820162 | 3R | 22269750..22269949 | 1232..1033 | 1000 | 100 | Minus |
3R | 31820162 | 3R | 22271193..22271386 | 194..1 | 955 | 99.4 | Minus |
3R | 31820162 | 3R | 22270011..22270154 | 1032..889 | 720 | 100 | Minus |
3R | 31820162 | 3R | 22270870..22270968 | 286..188 | 495 | 100 | Minus |
3R | 31820162 | 3R | 22261942..22262033 | 813..722 | 205 | 81.5 | Minus |
3R | 31820162 | 3R | 22272331..22272414 | 454..371 | 165 | 79.7 | Minus |
3R | 31820162 | 3R | 22262209..22262273 | 696..632 | 145 | 81.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18352728..18352870 | 890..1032 | 100 | <- | Minus |
chr3R | 18352468..18352666 | 1033..1231 | 99 | <- | Minus |
chr3R | 18352933..18353535 | 287..889 | 99 | <- | Minus |
chr3R | 18353587..18353684 | 189..286 | 100 | <- | Minus |
chr3R | 18353916..18354103 | 1..188 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33099-RA | 1..996 | 104..1099 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33099-RA | 1..996 | 104..1099 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33099-RA | 1..996 | 104..1099 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33099-RA | 1..996 | 104..1099 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33099-RA | 1..1231 | 1..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33099-RA | 1..1231 | 1..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33099-RA | 18..1248 | 1..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33099-RA | 1..1231 | 1..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33099-RA | 18..1248 | 1..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22528920..22529118 | 1033..1231 | 100 | <- | Minus |
3R | 22529180..22529322 | 890..1032 | 100 | <- | Minus |
3R | 22529385..22529987 | 287..889 | 100 | <- | Minus |
3R | 22530039..22530136 | 189..286 | 100 | <- | Minus |
3R | 22530368..22530555 | 1..188 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22528920..22529118 | 1033..1231 | 100 | <- | Minus |
3R | 22529180..22529322 | 890..1032 | 100 | <- | Minus |
3R | 22529385..22529987 | 287..889 | 100 | <- | Minus |
3R | 22530039..22530136 | 189..286 | 100 | <- | Minus |
3R | 22530368..22530555 | 1..188 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22528920..22529118 | 1033..1231 | 100 | <- | Minus |
3R | 22529180..22529322 | 890..1032 | 100 | <- | Minus |
3R | 22529385..22529987 | 287..889 | 100 | <- | Minus |
3R | 22530039..22530136 | 189..286 | 100 | <- | Minus |
3R | 22530368..22530555 | 1..188 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18354642..18354840 | 1033..1231 | 100 | <- | Minus |
arm_3R | 18354902..18355044 | 890..1032 | 100 | <- | Minus |
arm_3R | 18355107..18355709 | 287..889 | 100 | <- | Minus |
arm_3R | 18355761..18355858 | 189..286 | 100 | <- | Minus |
arm_3R | 18356090..18356277 | 1..188 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22270216..22270818 | 287..889 | 100 | <- | Minus |
3R | 22270870..22270967 | 189..286 | 100 | <- | Minus |
3R | 22271199..22271386 | 1..188 | 100 | Minus | |
3R | 22269751..22269949 | 1033..1231 | 100 | <- | Minus |
3R | 22270011..22270153 | 890..1032 | 100 | <- | Minus |
Translation from 103 to 1098
> LD12611.pep MINSKIREDKLETLVSRSSVPIIDLAHCGKSLVHRVGQQLHKAFTEKGIA FLVNHGIAEDKIKAVWDQFDNFLDLPAEVQDRYRRKDGVNYGYVSPGMER FDGSTPELRHAYNVCKLDGQNIPREALPEFAEGITTLCTDLKAMSLYIMK AMEVALEIPPSFFIDKHSQMLEGDDLNMTTLRMLYYPAIVDDEPGQSEGA IRCGAHVDYGTFTLLAQDSEGGLEVQLPGSEKWERVGHLPGAILINGGEL LSIWTKQRYHALPHRVVIPEQELIRTRGRHSIAYFCHPNNSILISPNDLL SEGEAKSEDKVYSAYELIQKKFNDTYGQRSQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16150-PA | 330 | GF16150-PA | 1..330 | 1..330 | 1491 | 80.6 | Plus |
Dana\GF16151-PA | 404 | GF16151-PA | 1..403 | 1..331 | 1079 | 51.6 | Plus |
Dana\GF16149-PA | 319 | GF16149-PA | 1..305 | 11..317 | 897 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12508-PA | 331 | GG12508-PA | 1..331 | 1..331 | 1714 | 95.5 | Plus |
Dere\GG12509-PA | 403 | GG12509-PA | 1..397 | 1..326 | 1055 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17399-PA | 408 | GH17399-PA | 1..401 | 1..326 | 1104 | 53.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33099-PA | 331 | CG33099-PA | 1..331 | 1..331 | 1740 | 100 | Plus |
CG5346-PA | 403 | CG5346-PA | 1..401 | 1..330 | 1027 | 51.1 | Plus |
CG33093-PA | 322 | CG33093-PA | 2..308 | 8..317 | 908 | 55.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22727-PA | 405 | GI22727-PA | 1..399 | 1..326 | 1126 | 54.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13684-PA | 342 | GL13684-PA | 1..337 | 1..331 | 1340 | 73.3 | Plus |
Dper\GL13685-PA | 403 | GL13685-PA | 1..402 | 1..331 | 1057 | 50.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26989-PA | 344 | GA26989-PA | 1..339 | 1..331 | 1345 | 73.7 | Plus |
Dpse\GA18819-PA | 403 | GA18819-PA | 1..402 | 1..331 | 1057 | 50.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23643-PA | 403 | GM23643-PA | 1..402 | 1..331 | 1051 | 50.7 | Plus |
Dsec\GM23640-PA | 322 | GM23640-PA | 2..308 | 8..317 | 947 | 56.9 | Plus |
Dsec\GM23642-PA | 180 | GM23642-PA | 1..180 | 152..331 | 931 | 96.1 | Plus |
Dsec\GM23641-PA | 118 | GM23641-PA | 1..111 | 1..111 | 578 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18451-PA | 331 | GD18451-PA | 1..331 | 1..331 | 1748 | 97.6 | Plus |
Dsim\GD18452-PA | 403 | GD18452-PA | 1..402 | 1..331 | 1051 | 50.7 | Plus |
Dsim\GD18450-PA | 284 | GD18450-PA | 2..273 | 8..299 | 828 | 53.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24665-PA | 408 | GJ24665-PA | 1..401 | 1..326 | 1140 | 55.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14436-PA | 332 | GK14436-PA | 8..332 | 8..329 | 1183 | 64.5 | Plus |
Dwil\GK14437-PA | 404 | GK14437-PA | 1..402 | 1..331 | 1049 | 51.5 | Plus |
Dwil\GK14435-PA | 315 | GK14435-PA | 3..298 | 12..302 | 849 | 53.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24030-PA | 331 | GE24030-PA | 1..331 | 1..331 | 1740 | 97 | Plus |
Dyak\GE24031-PA | 403 | GE24031-PA | 1..402 | 1..331 | 1055 | 51 | Plus |
Dyak\GE24029-PA | 321 | GE24029-PA | 2..307 | 8..317 | 893 | 54 | Plus |
Translation from 103 to 1098
> LD12611.hyp MINSKIREDKLETLVSRSSVPIIDLAHCGKSLVHRVGQQLHKAFTEKGIA FLVNHGIAEDKIKAVWDQFDNFLDLPAEVQDRYRRKDGVNYGYVSPGMER FDGSTPELRHAYNVCKLDGQNIPREALPEFAEGITTLCTDLKAMSLYIMK AMEVALEIPPSFFIDKHSQMLEGDDLNMTTLRMLYYPAIVDDEPGQSEGA IRCGAHVDYGTFTLLAQDSEGGLEVQLPGSEKWERVGHLPGAILINGGEL LSIWTKQRYHALPHRVVIPEQELIRTRGRHSIAYFCHPNNSILISPNDLL SEGEAKSEDKVYSAYELIQKKFNDTYGQRSQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33099-PA | 331 | CG33099-PA | 1..331 | 1..331 | 1740 | 100 | Plus |
CG5346-PA | 403 | CG5346-PA | 1..401 | 1..330 | 1027 | 51.1 | Plus |
CG33093-PA | 322 | CG33093-PA | 2..308 | 8..317 | 908 | 55.9 | Plus |