BDGP Sequence Production Resources |
Search the DGRC for LD12639
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 126 |
Well: | 39 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG7492-RA |
Protein status: | LD12639.pep: gold |
Preliminary Size: | 2423 |
Sequenced Size: | 2685 |
Gene | Date | Evidence |
---|---|---|
CG7492 | 2001-01-01 | Release 2 assignment |
CG7492 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7492 | 2003-02-27 | Blastp of sequenced clone |
CG7492 | 2008-04-29 | Release 5.5 accounting |
CG7492 | 2008-08-15 | Release 5.9 accounting |
CG7492 | 2008-12-18 | 5.12 accounting |
2685 bp (2685 high quality bases) assembled on 2003-02-27
GenBank Submission: BT004900
> LD12639.complete TCACACTGAATCGGGCAACATCACGGTGAAAAAAGGAAAGAATTGGGGAA AATGTGGTTTTCGGTCAAGTGATAGCAGCAACGCAGATGAGCTGGGCCGA GGAAAAACGGATAACCGAACCGTGAAAATCGTCAACTGGCCAAAAAACTC CTTGGCTGGGCCCTATGCAATTTCTGCCATCAAAAACTTGTCGACGTTCG GCTGTTTTTGTTGTTGTTGTTGCTGCTGCTGCTACTACTGCTACTGCTTG CTGATGGCTGCATTTTCGTATTGGCATCGGATTTTTCTTGGGTACCATTC GACGTACATATAATCCGTGGATGAAAATCCAGAACCGATTGCTGATGAGA GTCTGATGAAAGAAACGCAGTAGATACAGCAATCTATCGGATATTTCTAA TTATACAACGCAGCCCGTAGCAAAAACGTATTTTCACCCGAAGATCCGAA ACTGGTTATACACACATCGCAAGGAACACGGGAGGTTGGGAGGGCTGCCC CATGGACAAAATCAAGTTAAAGGTTATTGGCGTGCTGCGCGAACGCGATG GTGGAAATCGTAGTGGTTCTGGAGGATTGGGGGCAAGTGCTGGAGCAGGA GCTGGATCTGGCGGAGTTACGGCAACAGCAGGCCATCAGTTGGCCTCCGC AGGAGGAGCGGGCGTGGCGCAGCCCTCGATTGGGGTCACACAGGATAATA ACAACGAAGGCAACGCCCCGGGAGGTGGAGGAGCAGTAATCGAACCCCAG GCAACGGGAGGAGCCGCCGGACCATCTGGTGGAGTTGGTGGCGCCGCTAG AACATCGGTGCTATCCAGACCGCAGACCTCCAAGATTAGCGCTCTAGACC TGGCCGGTATACTCAACACGCGGAGAAGACTCGAGTGGACCAAGGAGTGG CTGCGCAAAAACCAGACCGAGTTTCTCAGCAAGGAGAATTTACTTAGTGA ACTGCAGTCGCGCAAGGATGAGTGCTATCACTTGAATTACTTTCTAGCCA TAACAGAGAGCCAGTTTCGGTATCTAGTGCAAAAGCTGGAGCCCATCATT AGCCAGTATGCTCCGCAACGCAAGAAGAAGTCCTTCAGCGCCGAGGAACG ACTGGCCATAACGCTCAAGTATTTGGCAACGGGTGAAGTACATTCTTGTC GAAACTACTGCTTCCGTGCCTCGAAATTTGTGATAAACGAAATGATTGCC AATATCTGTCTGGGCTTCTACGAGCACCTCAAGGACCAATACGTGACACT ACCAAAGACTGACGATCAGTGGCGCAGCGCCGCCGAGGAGATGGAGCGTA AGCACAACCTGCCCCACTGTGTGGGCAATCTGTTCATGCGCAGCATCCAA CTCCAAGGCTCTGGGACCGCTTCGAGTTCCGGAGCGGCGAGCAGCGCATC CGCCGTTGGCGACGATCGCAAGCGCGCGACCGTCATCTTCACGGGCATTG TGGATGCCGACAACAATTTCCAGTACGCAAGGGTGGAAAGGGCGGCGAGC AGCCGACCCAATGACATCTATAACCAGACCAGTGCCATCGAGCTGATTAG GCACAAGATGCACGCTCTGGAGGAACAACAGTCGGCGGAGATGGACCGAC AGGGCTATTACTTTGCTGGCGATTCGGTACTGCCTGCCACCTCGTATCTG GTGACCACACGCAACCTGCCCAAGGATCTGGCCGTACTGGAGGCCCTGGA GCAGGTCAATGCCCATGCGGATCAAACGATGCGGATACTGTGTAACATGT TCCCCATTCTGGCGCAGCCGCTGCGCATCAGTGACAAGCACATCCGCGAA GTGGTGCTCGGCTGTGTGGCGCTGTACAATTTCCTGCGCAAGACGGACGA CTCATTTCGGCGCACCAGCGACAGCATCGTGCAGCAAAGGGCAGAGCAGC AGCAGCTGGCCTACAGTGTCGATAGCGATGAAATTGACGACGATTGCATC ATGCTGGCCACCGAGGAGGAGTTACGCGAACGGGCGGAGTTCACGCCCAG CGTTGGACTGACCACCTGCTTCCAGCCGCTGTGTACGCAGCGTGGCGAGA CGCCCGAAGGTCTGGCTAAGAGGAACTGGCTGCTCCAGCTGGACTTTGCC CAACAGAGCGGAAACGGAAGCGGTATTGGCATAGGAATTGGCAATGGTAA TATGAGCGGAAATGGCAGCATTGTCGGCAGTACAGACAGTGCGAGCGGCA GTTCAAATGGGAGTTTATATTAGTGCAATTTACCTAAGTACTTTACGAAT TTTGTATAGTTCCTTGTTTTATATTTTCTAAATCTGTAATCTGTAACAGC ATCTGTTGCCACGTTGCCGACTTTTGTTTACCTCTCTCGTTTGGCGCATT ATCTACTGCATACCATTACGACTACGACTATGTTCACGTTCGTTCCATCT GCGTTCCGTGCTTCATCTAGGGTTCTGTATAGTTAGCTTAGTTTCTTGCG GAAGTTCCGGTTCGGTGAATGATGCTATGTGATGTCTCAAATCTCTATTG TGGCCCAGTGCACTGCTCCTGGGGAGCGGCCTGCTTATTAAACGGGTCTG GCAACAAACAAAAAAGTAAAAAAAAAAAAAAGCGGCAGCTGACAAAAATG TGCGAAGTCGAAGAAGTACATCGGAAACAGATCAACAAAATTAAAATTTT AGTATTCGTATTTAAGCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 7643995..7645536 | 2667..1132 | 7425 | 99 | Minus |
chr3L | 24539361 | chr3L | 7645594..7646235 | 1134..493 | 3180 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 7646387..7646880 | 494..1 | 2455 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 7651848..7653401 | 2685..1132 | 7755 | 99.9 | Minus |
3L | 28110227 | 3L | 7653459..7654100 | 1134..493 | 3210 | 100 | Minus |
3L | 28110227 | 3L | 7654252..7654745 | 494..1 | 2470 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 7644948..7646501 | 2685..1132 | 7755 | 99.9 | Minus |
3L | 28103327 | 3L | 7646559..7647200 | 1134..493 | 3210 | 100 | Minus |
3L | 28103327 | 3L | 7647352..7647845 | 494..1 | 2470 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 7643995..7645535 | 1133..2667 | 99 | <- | Minus |
chr3L | 7645596..7646234 | 494..1132 | 99 | <- | Minus |
chr3L | 7646388..7646619 | 262..493 | 99 | == | Minus |
chr3L | 7646693..7646880 | 1..188 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7492-RA | 1..1722 | 502..2223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7492-RA | 1..1722 | 502..2223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7492-RA | 1..1722 | 502..2223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7492-RA | 1..1722 | 502..2223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7492-RA | 1..1722 | 502..2223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7492-RA | 1..2667 | 1..2667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7492-RA | 1..2667 | 1..2667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7492-RA | 8..2674 | 1..2667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7492-RA | 1..2667 | 1..2667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7492-RA | 8..2674 | 1..2667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7651866..7653400 | 1133..2667 | 100 | <- | Minus |
3L | 7653461..7654099 | 494..1132 | 100 | <- | Minus |
3L | 7654253..7654745 | 1..493 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7651866..7653400 | 1133..2667 | 100 | <- | Minus |
3L | 7653461..7654099 | 494..1132 | 100 | <- | Minus |
3L | 7654253..7654745 | 1..493 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7651866..7653400 | 1133..2667 | 100 | <- | Minus |
3L | 7653461..7654099 | 494..1132 | 100 | <- | Minus |
3L | 7654253..7654745 | 1..493 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 7644966..7646500 | 1133..2667 | 100 | <- | Minus |
arm_3L | 7646561..7647199 | 494..1132 | 100 | <- | Minus |
arm_3L | 7647353..7647845 | 1..493 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7644966..7646500 | 1133..2667 | 100 | <- | Minus |
3L | 7646561..7647199 | 494..1132 | 100 | <- | Minus |
3L | 7647353..7647845 | 1..493 | 100 | Minus |
Translation from 501 to 2222
> LD12639.pep MDKIKLKVIGVLRERDGGNRSGSGGLGASAGAGAGSGGVTATAGHQLASA GGAGVAQPSIGVTQDNNNEGNAPGGGGAVIEPQATGGAAGPSGGVGGAAR TSVLSRPQTSKISALDLAGILNTRRRLEWTKEWLRKNQTEFLSKENLLSE LQSRKDECYHLNYFLAITESQFRYLVQKLEPIISQYAPQRKKKSFSAEER LAITLKYLATGEVHSCRNYCFRASKFVINEMIANICLGFYEHLKDQYVTL PKTDDQWRSAAEEMERKHNLPHCVGNLFMRSIQLQGSGTASSSGAASSAS AVGDDRKRATVIFTGIVDADNNFQYARVERAASSRPNDIYNQTSAIELIR HKMHALEEQQSAEMDRQGYYFAGDSVLPATSYLVTTRNLPKDLAVLEALE QVNAHADQTMRILCNMFPILAQPLRISDKHIREVVLGCVALYNFLRKTDD SFRRTSDSIVQQRAEQQQLAYSVDSDEIDDDCIMLATEEELRERAEFTPS VGLTTCFQPLCTQRGETPEGLAKRNWLLQLDFAQQSGNGSGIGIGIGNGN MSGNGSIVGSTDSASGSSNGSLY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23772-PA | 556 | GF23772-PA | 1..556 | 1..573 | 2357 | 81.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14945-PA | 585 | GG14945-PA | 11..585 | 1..573 | 2511 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16858-PA | 566 | GH16858-PA | 1..539 | 1..530 | 1952 | 70.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7492-PA | 573 | CG7492-PA | 1..573 | 1..573 | 2937 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13081-PA | 526 | GI13081-PA | 1..523 | 1..543 | 1982 | 72.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24110-PA | 599 | GL24110-PA | 40..599 | 1..573 | 2123 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20390-PA | 560 | GA20390-PA | 1..560 | 1..573 | 2180 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13740-PA | 572 | GM13740-PA | 1..572 | 1..573 | 2984 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13041-PA | 572 | GD13041-PA | 1..572 | 1..573 | 2984 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13830-PA | 572 | GJ13830-PA | 51..571 | 1..557 | 2032 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24247-PA | 588 | GK24247-PA | 142..587 | 98..557 | 2002 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20397-PA | 573 | GE20397-PA | 1..573 | 1..573 | 2547 | 95.6 | Plus |
Translation from 501 to 2222
> LD12639.hyp MDKIKLKVIGVLRERDGGNRSGSGGLGASAGAGAGSGGVTATAGHQLASA GGAGVAQPSIGVTQDNNNEGNAPGGGGAVIEPQATGGAAGPSGGVGGAAR TSVLSRPQTSKISALDLAGILNTRRRLEWTKEWLRKNQTEFLSKENLLSE LQSRKDECYHLNYFLAITESQFRYLVQKLEPIISQYAPQRKKKSFSAEER LAITLKYLATGEVHSCRNYCFRASKFVINEMIANICLGFYEHLKDQYVTL PKTDDQWRSAAEEMERKHNLPHCVGNLFMRSIQLQGSGTASSSGAASSAS AVGDDRKRATVIFTGIVDADNNFQYARVERAASSRPNDIYNQTSAIELIR HKMHALEEQQSAEMDRQGYYFAGDSVLPATSYLVTTRNLPKDLAVLEALE QVNAHADQTMRILCNMFPILAQPLRISDKHIREVVLGCVALYNFLRKTDD SFRRTSDSIVQQRAEQQQLAYSVDSDEIDDDCIMLATEEELRERAEFTPS VGLTTCFQPLCTQRGETPEGLAKRNWLLQLDFAQQSGNGSGIGIGIGNGN MSGNGSIVGSTDSASGSSNGSLY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7492-PA | 573 | CG7492-PA | 1..573 | 1..573 | 2937 | 100 | Plus |