BDGP Sequence Production Resources |
Search the DGRC for LD12690
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 126 |
Well: | 90 |
Vector: | pBS SK- |
Associated Gene/Transcript | poly-RA |
Protein status: | LD12690.pep: gold |
Preliminary Size: | 1233 |
Sequenced Size: | 1140 |
Gene | Date | Evidence |
---|---|---|
CG9829 | 2001-01-01 | Release 2 assignment |
CG9829 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9829 | 2003-07-26 | Blastp of sequenced clone |
poly | 2008-04-29 | Release 5.5 accounting |
poly | 2008-08-15 | Release 5.9 accounting |
poly | 2008-12-18 | 5.12 accounting |
1140 bp (1140 high quality bases) assembled on 2003-07-26
GenBank Submission: BT011120
> LD12690.complete AACATGTTTTTCATGTCAAAATTGTATATTTGTTTCGTAAACTAAACCGA GAAAGTGAATCCCTTGCCACCATTGAATTGATATCTAAGCCCGGCAGTCC TCCAAACCAACGGATCGAAACAATGGCCACCTCAGTCCTGCTAGCCTGTG GACTCAATGAGCAGAAATTGCCAGGATTTGTCCACATCAGCGAGGAGTCC AATGTGGATGCCAGCTTTTTGATCAGCTGCGTTTTGGGTCAGAGATTGCG CATCTCAAATGCTGGAACTCTGCTCGTCTGTTTGCAGCATCACTACCAGC ATTATTTTAATGCTGGCATGAGGTTGGGCTATAATACGAACATTTTCCAG GGGAAAACTCTGGGTGTTATCGATGTTCTGAGCGACATGGCCGGCGAGGG ATTGGCTTCCAAATGGCTAACGAATACCGAGGGTCAGACATTAACCGACC AGCTAGTAGAGGATATTCGCGCCCAGGTGGAGAGGAACTATGCCAGTCGC AACTCATATACGGTTCTGATCGACAATCTGTCCATATTGTTCAATTTGGG AGCAAGCAAGCTGCAGGTTCAGCAGTTCTGCCAGGACCTGGCTGCGCTAG GCAAGGAGCGCGAAAAGCTGACGGTGATCACCAAGCTCAGCAACAGCGAC ATCTACCAGCTGACGGACAACAATGTCGCCAAGCTCGGTCAGGTGCGCAT CCAGGTGTTGCGTTTAAAGAGCGGTGTCTTCCGTGAGGTGGATGGCAAGC TGCTAATCGAACGCGTTCTGGACGAAGGAAACTATGCCTGCGAGGAGACA CGCAAGGAGGTGCTCTACAAGGTCAACGATCGCAACGTCAAGGTCTTTGC ACCCGGCGAAATTGGGGTCAAAGTCTAAAGGCTGCATAAGCTCAAATAAT TGTATGAATTTTAATAAAGCCATTTTTTGTATATTCCAAACATAGCCAGT CAAAGGTTTCATATTGCGTCGGAATATACAGTGCTTGTTTCAAATTTTGA AATGGTAAATCAAGCGATTAGACTTGTAATTGGAACCATATTTTAGTTAT ATTTTTGCAAATATGTCATTCTGTTTCCTAGGCTAGATGTAGGAATTAAA ATTAATTTAAATTTAAATTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
poly-RA | 1309 | poly-RA | 191..1309 | 1..1119 | 5595 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbif\P-element_M | 2935 | Dbif\P-element_M P_M 2935bp Derived from X60990. | 1689..1767 | 1070..995 | 134 | 68.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 9187060..9188041 | 114..1095 | 99 | <- | Minus |
chr3R | 9191943..9192055 | 1..113 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
poly-RA | 1..756 | 123..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
poly-RB | 1..756 | 123..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
poly-RA | 1..756 | 123..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
poly-RA | 1..756 | 123..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
poly-RA | 1..756 | 123..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
poly-RA | 32..1150 | 1..1119 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
poly-RA | 36..1154 | 1..1119 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
poly-RA | 39..1157 | 1..1119 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
poly-RA | 32..1150 | 1..1119 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
poly-RA | 39..1157 | 1..1119 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13361852..13362857 | 114..1119 | 100 | <- | Minus |
3R | 13366760..13366872 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13361852..13362857 | 114..1119 | 100 | <- | Minus |
3R | 13366760..13366872 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13361852..13362857 | 114..1119 | 100 | <- | Minus |
3R | 13366760..13366872 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 9187574..9188579 | 114..1119 | 100 | <- | Minus |
arm_3R | 9192482..9192594 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13107591..13107703 | 1..113 | 100 | Minus | |
3R | 13102683..13103688 | 114..1119 | 100 | <- | Minus |
Translation from 2 to 877
> LD12690.hyp HVFHVKIVYLFRKLNRESESLATIELISKPGSPPNQRIETMATSVLLACG LNEQKLPGFVHISEESNVDASFLISCVLGQRLRISNAGTLLVCLQHHYQH YFNAGMRLGYNTNIFQGKTLGVIDVLSDMAGEGLASKWLTNTEGQTLTDQ LVEDIRAQVERNYASRNSYTVLIDNLSILFNLGASKLQVQQFCQDLAALG KEREKLTVITKLSNSDIYQLTDNNVAKLGQVRIQVLRLKSGVFREVDGKL LIERVLDEGNYACEETRKEVLYKVNDRNVKVFAPGEIGVKV*
Translation from 122 to 877
> LD12690.pep MATSVLLACGLNEQKLPGFVHISEESNVDASFLISCVLGQRLRISNAGTL LVCLQHHYQHYFNAGMRLGYNTNIFQGKTLGVIDVLSDMAGEGLASKWLT NTEGQTLTDQLVEDIRAQVERNYASRNSYTVLIDNLSILFNLGASKLQVQ QFCQDLAALGKEREKLTVITKLSNSDIYQLTDNNVAKLGQVRIQVLRLKS GVFREVDGKLLIERVLDEGNYACEETRKEVLYKVNDRNVKVFAPGEIGVK V*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17390-PA | 251 | GF17390-PA | 1..251 | 1..251 | 1227 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17062-PA | 251 | GG17062-PA | 1..251 | 1..251 | 1276 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18551-PA | 251 | GH18551-PA | 1..251 | 1..251 | 1145 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
poly-PB | 251 | CG9829-PB | 1..251 | 1..251 | 1268 | 100 | Plus |
poly-PA | 251 | CG9829-PA | 1..251 | 1..251 | 1268 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23250-PA | 252 | GI23250-PA | 1..252 | 1..251 | 1100 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23070-PA | 251 | GL23070-PA | 1..251 | 1..251 | 1204 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22063-PA | 251 | GA22063-PA | 1..251 | 1..251 | 1208 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25947-PA | 251 | GM25947-PA | 1..251 | 1..251 | 1287 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20507-PA | 251 | GD20507-PA | 1..251 | 1..251 | 1274 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10747-PA | 251 | GJ10747-PA | 1..251 | 1..251 | 1119 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13353-PA | 251 | GK13353-PA | 1..251 | 1..251 | 1159 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24450-PA | 251 | GE24450-PA | 1..251 | 1..251 | 1283 | 96.8 | Plus |