Clone LD12841 Report

Search the DGRC for LD12841

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:128
Well:41
Vector:pBS SK-
Associated Gene/TranscriptSu(Tpl)-RA
Protein status:LD12841.pep: gold
Sequenced Size:4290

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Su(Tpl) 2008-12-18 5.12 accounting

Clone Sequence Records

LD12841.complete Sequence

4290 bp assembled on 2008-09-26

GenBank Submission: BT058015.1

> LD12841.complete
GACGTGGCAGCCATGACGTGATTTCTGAGTTTTTGTTAAAGAGATTACAT
TATTAATTGTAGAGAAAACTGTTAATTAAGGGGAATACGTGCATTACTCG
CCACCGCCTACCGATTGCCAGTGTAAAGCCACAAATCCAAGTGAAATTAA
GTCAATGCAGTAACAAGGCAACGGAACAGAAATCAACAACACGTATACGC
TTGCACAGTATAGCAACAATCAACTCACAACAACAAGAAGTCAACGTCCA
ACAATTTAAAGCTCATATCTCGATTGACCGATAAGTCTAGACCACCAAAT
CGATAATACGCATTTACCAACACTGCTGTGGCAAGAGAGCAGAGCGAGTG
AGCGGGCAAAACAGCTGATTGCGACTGGCACACGGTTGTTGTTGCAGTCG
TGCTGTTTTTCTTTCTGTTTTGTTGGAACTTTATCGCTGCAGCGATAAAG
AGAGCGGAGCGCGAGAGGGAGAGCAGCACAAACTACTACGTGTGACGTGG
TGTGGGGGCATACAGGTGGCAAAACAGCTGTTTCAACAGCAAAACCAATC
TGTTTTTTATTAGAATACATAATCAATTTACCGCCTGCAGATTTCCAGCT
AAAAAACAAACTCACATACAACCAAAAAAACCAACAATATCTACAAAAAA
CAAACGTTAGCATCCAAGAGAGAGAAACTTCCAGTGGCAAGTTGTCTACT
TCCACAACGAGTGCTTCCCGTACTTCCCGTCCTTTCCACGAGATCAACCA
AGCCGGCGGCCACCTTCCACACAACAATAACTAGCACAGCCCAGCCCCTT
CCACAATTTCCAAGCTGGCCCAAACAACACAACCAAGTGCAACTTTCCAA
ACTACAACAACTACTACTGATCCGATCCATCACAATCCGTTTCATAAATT
TTCCGGAAACAATCGAGTGGCTATCTAATTGCTATCTAATTAGCGGCTAG
TTGCGCGCACGTTATGACCAATTCGATTGCGTCAACGAAATGCCTGCCCA
ATGCACTATCGACCGGCAATTATGGAATGTCCCAGAGCCACCGTTACACC
GATGATAGCAAGGAGTACATCATCGTCAAGCTTACCGATTCTGCCTTCCG
TGCGATCGAGGAATATCAGCGCGATGACAACGCTAAACGCCTGCAACCAG
GCCAAAGGGCCAAAATCCAATTTGTGGGCAACACGGGTGTCATACAGTTC
CCGCGACCAGCGACGGATGCTAATGGCATCCCTAATGCTAATGGCAATGG
CAGCGACGCGACTGGAGCAGGAGGAGGAGGTGGTAGAAAATTTGGCTTCA
CTATCAACAATATGGAGGGAACGCTTGAATGCGTTCAGCAGCAGCAACGG
AGCCTCGGAGTCCTCGGAGCGGTCACCCTGCGAATGCGGATTCATGCCAA
TGAAGATGTCTACGATTCGACACGCACAAAAATGGCCATTGCCGAGGAGA
CGGAGAAGAGCAAGTGCATCAGGGAAATCAAGCCGAATCAGTCGGATATC
GGGCGTAAGGTGAAGAAGCCGCCATCAGCAATCCAATCTTCTGCCTCAAC
CGCCTCAGCCTTCTCCTCCAACTCCTCTAACTCCGGTTTGACGACGACGG
CATTTCATCATCACAGCAACAGCAACAACAGTGGGAACAACAACAACAGG
AGCAGCAGCAGCAGCAATAGTTTTAATAGCAACAACCATAGTCGTAAGTT
AGGTTCATCGCCATTTAATGGCCTAGGCGTAGGATCCAGCAGCTCCTCCA
GCGCGTTTGCCTCGCGCTCGCCCAATCCCAGCACGCTGGGCGCTATCGGC
ACAGTCAATGGCTCTGGCGTTGTTGGTGGTCGCTATGGTGGCGGTGCAGC
CTCCTCGCTAGCTTCCACATTCGCCAACGGCATCTCACAGGGCTACCACA
ACCTGAGCGGCAGCTCGCCAAGAGACTCGATGACAGCGGGAACATCAAGT
GCGACTGCCTCATCAGTCATCTCCTCACGCAACAAGATGCCAAGCGGAGG
CCTTACCTCCTCCAACTCCAACTCCTCATCGTCCTCCAGGAGTGCCAATA
GCAAGTCTTCGGGCGGCAACAAGATGTCCGATGTGTCCAGGCGCAATATA
CGCGAACGGCTTATCCATCTGCTGGCCCTCAAGGCCTTCAAGAAGCCTGA
GCTCTTTGCGCGCCTGAAGAACGAAGGCATTCGGGATCGGGAGCGTAACC
AGATCACCAACATACTCATGGACATTAGCACCATGTCGCACAACACGTAC
AATCTGCGTCGCCAGATGTGGAACGATGTGGACGAGAACTGGCCCTTTTT
CAGCGAACAGGAGGTTCAGCAGCTGAAGCGACGCAAGCCTCAAAATCTGA
CACCGCCAATGAGTTCGGACGCGGGCAGTTCGACGTCCGGCCAGAGTCCA
ACATCGACGCACACGGGCAGTCCGCCGCCGCCTTCAAGTAATGGTGGTCC
CGGTGGAGTTGGAAGTGGAGCAGGCGGTACGAGCATGAAGCGGACCAGCC
TCGAGTACGACGAGACCATGTTCAGCACTGTTCAGCCCAAGAAGCAGCGC
ATCAGTCACTACAAGAAGGACACTCCGCCCTCGGGAACGTCGTACTCTTC
CGCTGGGGTATCGATGTCACTGGGTTCATCTGGATCATCCAGTCGGAGTC
GGTATACGCCGCCGCAACGCCAGCCTGGTCCATTGGATGATCACAGCACA
ACTGACCTTAGCTACAATGTGCTGGACAACATAGTAGAGTTTATGAGCTC
CACGGCAGCGGCGACGCAGCAATCGATGGAACAGCAGCAGCATCCGAGAA
GCAACAGTAGTAATAACAGACGTGGAAGCTCCTCGTTGGCGGGCACCAGC
AATGGGGGCAACAACAAGGATAAGCGGAACTCTACGGGCAGCAATTCAAG
CAGCTCCAGTGGCTATGAGACGCAACAGGATCGCCAGCGTTCAACAACGC
CGATGTCGTCAAACCGCAGCAGCGCATCCTCTTCAACGACGCCGCCGAAG
CTTGCGGCCAGTTTTGTGCCCGCGGCCACCTCTGGATCCGCTTCCGGTAC
CAGCAAACAACGTATGCCGCCCCAGCAAAGCGACTACAACTCGTACAACA
GCAATAACGCTCAACATGTGGCGTCCAACAGCAAAAAAAGGATGGGTAGT
GTTGGTCCTAGTGGTGGATCGAATGGCCAGCGTCAAAGAAGTGCCAGTGG
CTCTAATTCTGGCTATCAACAGGTGCCGCCACCCTCGTCCAACTCGCGGT
CGTCTATCCAGCAGCAGAATCAGCACCAGAAGCAGCAGGTGCAACAGAAG
CAGGCGCCGTCGCAGCAGCAGCAGCAGCAGCAACAGCAATACCATCAGCA
AGCCAAGCATCCATCGCCATCGCAGCAGTTGGCTGCTGCTGCCCATGCCT
ATGCCCATGCCACCGCGGATACGGACTCATCCGCCACGCCGCGCTACGAC
TTCAGCCAATACGTGCCCATCCAGACCCTGGAGGTGCGGCGCCGTTACAA
GACTGAGTTCGAAAGCGACTACGATGAGTACCGCAAGCTGCTGACGCGCG
TCGAGGATGTGCGCAATCGTTTCCAGGACTTATCCGAACGTCTGGAGAGC
GCCAGGCGCTGTGACAACGGATACGGGGACTACGATCACATCAAGCGGCA
GATTGTGTGCGAATACGAGCGGATCAATAACGATCGCACCATTGGAGAGG
ACAAGGAGCGTTTTGATTACCTGCACGCCAAGCTGGCGCACATCAAGCAG
CTGGTGATGGACTATGACAAGACTTTGATGAGTGCCACGATGGCGATGGC
GCCCACGGACGTCGTTGCTGCTCAAGGGCCCGATCCAGCTGTGGCTAAGG
CGGCGGCCAGGTTAGCCGAACATCATCGTCGGCAACATCACGCCGCAGAG
ACGATAAAACAACAGCAGCAGCAAAAGCAGACACATCAGCATCATTTGCA
GCGTCATTTGCAGCATCATTTGCAGCAGCAACAAAATCTACTGCAGCAGC
AACAAAATCTACTGCAGCAGCAGAGTGTGAGTAATTCGGATGACAGTTCG
GATAGCTCGGATTCCAATGATGACGACGACGACGACGATGAGGACTGCGA
TGATTCCAACTCTAATACCGATGACGATGAGGCACGCTACTGATCCTGAT
CCTGATCCTGCTGGGACTACTTCGATGAGACCATCCGCAGATTCCCATGT
AAAAAGGCAAAACAAGCAAGAAACTAATATACATAAATACAACACTATTG
TAGTAAAAACGCAAAACAAAAGAAAAAAAAAAAAAAAAAA

LD12841.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:09:36
Subject Length Description Subject Range Query Range Score Percent Strand
Su(Tpl)-RB 4568 Su(Tpl)-RB 132..4420 1..4289 21430 99.9 Plus
Su(Tpl).b 4732 Su(Tpl).b 16..4304 1..4289 21430 99.9 Plus
Su(Tpl).a 4737 Su(Tpl).a 16..4309 1..4289 21355 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:45:02
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 19880738..19884381 4272..629 18145 99.9 Minus
chr3L 24539361 chr3L 19886247..19886594 578..231 1740 100 Minus
chr3L 24539361 chr3L 19898575..19898711 139..1 630 98.6 Minus
chr3L 24539361 chr3L 19886653..19886743 230..140 455 100 Minus
chr3L 24539361 chr3L 19886133..19886182 628..579 250 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:59:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19891378..19895038 4289..629 18290 100 Minus
3L 28110227 3L 19896912..19897259 578..231 1740 100 Minus
3L 28110227 3L 19909247..19909385 139..1 695 100 Minus
3L 28110227 3L 19897318..19897408 230..140 455 100 Minus
3L 28110227 3L 19896798..19896847 628..579 250 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:27:40
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 19884478..19888138 4289..629 18290 99.9 Minus
3L 28103327 3L 19890012..19890359 578..231 1740 100 Minus
3L 28103327 3L 19902347..19902485 139..1 695 100 Minus
3L 28103327 3L 19890418..19890508 230..140 455 100 Minus
3L 28103327 3L 19889898..19889947 628..579 250 100 Minus
Blast to na_te.dros performed 2019-03-15 18:45:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2773..2964 2746..2938 188 61 Plus

LD12841.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:45:50 Download gff for LD12841.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 19880756..19880879 4131..4254 100 == Minus
chr3L 19880946..19881025 3985..4064 100 == Minus
chr3L 19881103..19881658 3352..3907 100 == Minus
chr3L 19881758..19883323 1687..3252 99 == Minus
chr3L 19883397..19884381 629..1613 99 <- Minus
chr3L 19886133..19886182 579..628 100 <- Minus
chr3L 19886247..19886594 231..578 100 <- Minus
chr3L 19886653..19886743 140..230 100 <- Minus
chr3L 19898575..19898711 1..139 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:39:10 Download gff for LD12841.complete
Subject Subject Range Query Range Percent Splice Strand
Su(Tpl)-RA 1..3180 964..4143 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:14:06 Download gff for LD12841.complete
Subject Subject Range Query Range Percent Splice Strand
Su(Tpl)-RB 1..3180 964..4143 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:29:40 Download gff for LD12841.complete
Subject Subject Range Query Range Percent Splice Strand
Su(Tpl)-RA 1..3180 964..4143 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:59:14 Download gff for LD12841.complete
Subject Subject Range Query Range Percent Splice Strand
Su(Tpl)-RA 1..3180 964..4143 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:39:10 Download gff for LD12841.complete
Subject Subject Range Query Range Percent Splice Strand
Su(Tpl)-RA 643..4120 795..4272 100   Plus
Su(Tpl)-RA 1..633 1..628 99 == Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:14:05 Download gff for LD12841.complete
Subject Subject Range Query Range Percent Splice Strand
Su(Tpl)-RB 16..4277 1..4262 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:29:40 Download gff for LD12841.complete
Subject Subject Range Query Range Percent Splice Strand
Su(Tpl)-RB 26..4297 1..4272 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-29 18:11:01 Download gff for LD12841.complete
Subject Subject Range Query Range Percent Splice Strand
Su(Tpl)-RA 1..633 1..628 99 == Plus
Su(Tpl)-RA 643..4120 795..4272 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:59:14 Download gff for LD12841.complete
Subject Subject Range Query Range Percent Splice Strand
Su(Tpl)-RB 26..4297 1..4272 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:50 Download gff for LD12841.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19891395..19895038 629..4272 100 <- Minus
3L 19896798..19896847 579..628 100 <- Minus
3L 19896912..19897259 231..578 100 <- Minus
3L 19897318..19897408 140..230 100 <- Minus
3L 19909247..19909385 1..139 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:50 Download gff for LD12841.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19891395..19895038 629..4272 100 <- Minus
3L 19896798..19896847 579..628 100 <- Minus
3L 19896912..19897259 231..578 100 <- Minus
3L 19897318..19897408 140..230 100 <- Minus
3L 19909247..19909385 1..139 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:50 Download gff for LD12841.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19891395..19895038 629..4272 100 <- Minus
3L 19896798..19896847 579..628 100 <- Minus
3L 19896912..19897259 231..578 100 <- Minus
3L 19897318..19897408 140..230 100 <- Minus
3L 19909247..19909385 1..139 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:29:40 Download gff for LD12841.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19890418..19890508 140..230 100 <- Minus
arm_3L 19902347..19902485 1..139 100   Minus
arm_3L 19884495..19888138 629..4272 100 <- Minus
arm_3L 19889898..19889947 579..628 100 <- Minus
arm_3L 19890012..19890359 231..578 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:44:45 Download gff for LD12841.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19884495..19888138 629..4272 100 <- Minus
3L 19889898..19889947 579..628 100 <- Minus
3L 19890012..19890359 231..578 100 <- Minus
3L 19890418..19890508 140..230 100 <- Minus
3L 19902347..19902485 1..139 100   Minus

LD12841.pep Sequence

Translation from 963 to 4142

> LD12841.pep
MTNSIASTKCLPNALSTGNYGMSQSHRYTDDSKEYIIVKLTDSAFRAIEE
YQRDDNAKRLQPGQRAKIQFVGNTGVIQFPRPATDANGIPNANGNGSDAT
GAGGGGGRKFGFTINNMEGTLECVQQQQRSLGVLGAVTLRMRIHANEDVY
DSTRTKMAIAEETEKSKCIREIKPNQSDIGRKVKKPPSAIQSSASTASAF
SSNSSNSGLTTTAFHHHSNSNNSGNNNNRSSSSSNSFNSNNHSRKLGSSP
FNGLGVGSSSSSSAFASRSPNPSTLGAIGTVNGSGVVGGRYGGGAASSLA
STFANGISQGYHNLSGSSPRDSMTAGTSSATASSVISSRNKMPSGGLTSS
NSNSSSSSRSANSKSSGGNKMSDVSRRNIRERLIHLLALKAFKKPELFAR
LKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWNDVDENWPFFSEQE
VQQLKRRKPQNLTPPMSSDAGSSTSGQSPTSTHTGSPPPPSSNGGPGGVG
SGAGGTSMKRTSLEYDETMFSTVQPKKQRISHYKKDTPPSGTSYSSAGVS
MSLGSSGSSSRSRYTPPQRQPGPLDDHSTTDLSYNVLDNIVEFMSSTAAA
TQQSMEQQQHPRSNSSNNRRGSSSLAGTSNGGNNKDKRNSTGSNSSSSSG
YETQQDRQRSTTPMSSNRSSASSSTTPPKLAASFVPAATSGSASGTSKQR
MPPQQSDYNSYNSNNAQHVASNSKKRMGSVGPSGGSNGQRQRSASGSNSG
YQQVPPPSSNSRSSIQQQNQHQKQQVQQKQAPSQQQQQQQQQYHQQAKHP
SPSQQLAAAAHAYAHATADTDSSATPRYDFSQYVPIQTLEVRRRYKTEFE
SDYDEYRKLLTRVEDVRNRFQDLSERLESARRCDNGYGDYDHIKRQIVCE
YERINNDRTIGEDKERFDYLHAKLAHIKQLVMDYDKTLMSATMAMAPTDV
VAAQGPDPAVAKAAARLAEHHRRQHHAAETIKQQQQQKQTHQHHLQRHLQ
HHLQQQQNLLQQQQNLLQQQSVSNSDDSSDSSDSNDDDDDDDEDCDDSNS
NTDDDEARY*

LD12841.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:50:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10841-PA 1110 GF10841-PA 1..1110 1..1059 2500 61 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:28
Subject Length Description Subject Range Query Range Score Percent Strand
Su(Tpl)-PC 1059 CG32217-PC 1..1059 1..1059 5453 100 Plus
Su(Tpl)-PB 1059 CG32217-PB 1..1059 1..1059 5453 100 Plus
Su(Tpl)-PA 1059 CG32217-PA 1..1059 1..1059 5453 100 Plus
Mur89F-PC 2158 CG4090-PC 219..888 102..804 283 23.3 Plus
Mur89F-PB 2159 CG4090-PB 219..888 102..804 283 23.3 Plus
Mur89F-PC 2158 CG4090-PC 555..1120 188..764 272 23.4 Plus
Mur89F-PB 2159 CG4090-PB 555..1120 188..764 272 23.4 Plus
Mur89F-PC 2158 CG4090-PC 405..1038 175..828 251 22.7 Plus
Mur89F-PB 2159 CG4090-PB 405..1038 175..828 251 22.7 Plus
Hr4-PE 1842 CG43934-PE 124..899 217..1020 241 21.2 Plus
Hr4-PK 1843 CG43934-PK 124..899 217..1020 241 21.2 Plus
Hr4-PJ 1843 CG43934-PJ 124..899 217..1020 241 21.2 Plus
Hr4-PG 1986 CG43934-PG 267..1042 217..1020 241 21.2 Plus
Samuel-PE 846 CG31868-PE 140..696 180..737 239 23.4 Plus
Samuel-PD 846 CG31868-PD 140..696 180..737 239 23.4 Plus
Samuel-PB 968 CG31868-PB 140..696 180..737 239 23.4 Plus
Samuel-PA 968 CG31868-PA 140..696 180..737 239 23.4 Plus
Alh-PP 1717 CG1070-PP 553..1330 82..817 236 21.3 Plus
Alh-PL 1332 CG1070-PL 261..916 177..769 228 22.4 Plus
Alh-PK 1385 CG1070-PK 314..969 177..769 228 22.4 Plus
Muc68D-PB 1514 CG6004-PB 455..1124 145..826 227 18.5 Plus
Alh-PF 1165 CG1070-PF 122..778 187..817 226 22.2 Plus
sbb-PE 929 CG5580-PE 251..841 190..826 221 23.5 Plus
sbb-PC 929 CG5580-PC 251..841 190..826 221 23.5 Plus
sbb-PF 939 CG5580-PF 261..851 190..826 221 23.5 Plus
sbb-PH 2302 CG5580-PH 251..841 190..826 221 23.5 Plus
sbb-PD 2302 CG5580-PD 251..841 190..826 221 23.5 Plus
sbb-PG 2312 CG5580-PG 261..851 190..826 221 23.5 Plus
sbb-PJ 2330 CG5580-PJ 261..851 190..826 221 23.5 Plus
Alh-PP 1717 CG1070-PP 244..954 167..824 218 21.1 Plus
Alh-PD 1323 CG1070-PD 191..901 167..824 218 21.1 Plus
Alh-PA 1376 CG1070-PA 244..954 167..824 218 21.1 Plus
Alh-PL 1332 CG1070-PL 191..910 167..824 215 21.2 Plus
Alh-PK 1385 CG1070-PK 244..963 167..824 215 21.2 Plus
Alh-PP 1717 CG1070-PP 314..960 177..769 214 22.2 Plus
Alh-PD 1323 CG1070-PD 261..907 177..769 214 22.2 Plus
Alh-PA 1376 CG1070-PA 314..960 177..769 214 22.2 Plus
sbb-PE 929 CG5580-PE 233..797 175..750 213 21.9 Plus
sbb-PC 929 CG5580-PC 233..797 175..750 213 21.9 Plus
sbb-PF 939 CG5580-PF 243..807 175..750 213 21.9 Plus
sbb-PH 2302 CG5580-PH 233..797 175..750 213 21.9 Plus
sbb-PD 2302 CG5580-PD 233..797 175..750 213 21.9 Plus
sbb-PG 2312 CG5580-PG 243..807 175..750 213 21.9 Plus
sbb-PJ 2330 CG5580-PJ 243..807 175..750 213 21.9 Plus
nocte-PD 2305 CG17255-PD 1088..1724 253..805 211 23.2 Plus
nocte-PB 2309 CG17255-PB 1088..1724 253..805 211 23.2 Plus
nocte-PA 2309 CG17255-PA 1088..1724 253..805 211 23.2 Plus
nocte-PC 2309 CG17255-PC 1088..1724 253..805 211 23.2 Plus
Mur89F-PC 2158 CG4090-PC 799..1324 162..678 196 22.2 Plus
Mur89F-PB 2159 CG4090-PB 799..1324 162..678 196 22.2 Plus
Hr4-PF 1611 CG43934-PF 11..668 341..1020 196 22.2 Plus
Hr4-PC 1518 CG43934-PC 134..575 591..1020 189 23 Plus
Hr4-PD 1529 CG43934-PD 144..585 591..1020 189 23 Plus
Hr4-PH 1863 CG43934-PH 134..575 591..1020 189 23 Plus
Hr4-PI 2123 CG43934-PI 134..575 591..1020 189 23 Plus
mask-PF 3623 CG33106-PF 2508..3074 228..805 185 22.9 Plus
mask-PD 3636 CG33106-PD 2521..3087 228..805 185 22.9 Plus
mask-PE 4000 CG33106-PE 2885..3451 228..805 185 22.9 Plus
mask-PB 4001 CG33106-PB 2886..3452 228..805 185 22.9 Plus
mask-PA 4001 CG33106-PA 2886..3452 228..805 185 22.9 Plus
mask-PC 4010 CG33106-PC 2895..3461 228..805 185 22.9 Plus
Muc68D-PB 1514 CG6004-PB 359..1054 151..838 183 18.7 Plus
Samuel-PE 846 CG31868-PE 77..539 275..761 181 23.4 Plus
Samuel-PD 846 CG31868-PD 77..539 275..761 181 23.4 Plus
Samuel-PB 968 CG31868-PB 77..539 275..761 181 23.4 Plus
Samuel-PA 968 CG31868-PA 77..539 275..761 181 23.4 Plus
Alh-PP 1717 CG1070-PP 798..1341 192..774 177 22.9 Plus
Alh-PF 1165 CG1070-PF 246..789 192..774 177 22.9 Plus
Muc68D-PB 1514 CG6004-PB 147..737 175..832 175 18.3 Plus
tn-PF 827 CG15105-PF 490..792 448..763 175 25.9 Plus
Atx2-PA 888 CG5166-PA 294..635 466..835 175 23.9 Plus
Atx2-PD 1023 CG5166-PD 294..635 466..835 175 23.9 Plus
Atx2-PC 1023 CG5166-PC 294..635 466..835 175 23.9 Plus
Atx2-PB 1084 CG5166-PB 355..696 466..835 175 23.9 Plus
tn-PA 1353 CG15105-PA 490..792 448..763 175 25.9 Plus
tn-PB 1353 CG15105-PB 490..792 448..763 175 25.9 Plus
Pdp1-PJ 633 CG17888-PJ 17..245 596..830 174 26.9 Plus
Pdp1-PD 647 CG17888-PD 17..245 596..830 174 26.9 Plus
Mur89F-PC 2158 CG4090-PC 165..471 542..832 169 24.8 Plus
Mur89F-PB 2159 CG4090-PB 165..471 542..832 169 24.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:51:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13662-PA 1071 GI13662-PA 1..936 1..939 2276 58.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:51:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23928-PA 1115 GA23928-PA 1..1004 1..940 2481 64.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:51:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15678-PA 1057 GM15678-PA 1..979 1..981 3626 94.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:51:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12242-PA 1056 GD12242-PA 1..978 1..981 3633 93.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13997-PA 835 GJ13997-PA 16..715 265..940 1561 59.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:51:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17503-PA 1144 GK17503-PA 1..615 1..594 1613 61.8 Plus

LD12841.hyp Sequence

Translation from 963 to 4142

> LD12841.hyp
MTNSIASTKCLPNALSTGNYGMSQSHRYTDDSKEYIIVKLTDSAFRAIEE
YQRDDNAKRLQPGQRAKIQFVGNTGVIQFPRPATDANGIPNANGNGSDAT
GAGGGGGRKFGFTINNMEGTLECVQQQQRSLGVLGAVTLRMRIHANEDVY
DSTRTKMAIAEETEKSKCIREIKPNQSDIGRKVKKPPSAIQSSASTASAF
SSNSSNSGLTTTAFHHHSNSNNSGNNNNRSSSSSNSFNSNNHSRKLGSSP
FNGLGVGSSSSSSAFASRSPNPSTLGAIGTVNGSGVVGGRYGGGAASSLA
STFANGISQGYHNLSGSSPRDSMTAGTSSATASSVISSRNKMPSGGLTSS
NSNSSSSSRSANSKSSGGNKMSDVSRRNIRERLIHLLALKAFKKPELFAR
LKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWNDVDENWPFFSEQE
VQQLKRRKPQNLTPPMSSDAGSSTSGQSPTSTHTGSPPPPSSNGGPGGVG
SGAGGTSMKRTSLEYDETMFSTVQPKKQRISHYKKDTPPSGTSYSSAGVS
MSLGSSGSSSRSRYTPPQRQPGPLDDHSTTDLSYNVLDNIVEFMSSTAAA
TQQSMEQQQHPRSNSSNNRRGSSSLAGTSNGGNNKDKRNSTGSNSSSSSG
YETQQDRQRSTTPMSSNRSSASSSTTPPKLAASFVPAATSGSASGTSKQR
MPPQQSDYNSYNSNNAQHVASNSKKRMGSVGPSGGSNGQRQRSASGSNSG
YQQVPPPSSNSRSSIQQQNQHQKQQVQQKQAPSQQQQQQQQQYHQQAKHP
SPSQQLAAAAHAYAHATADTDSSATPRYDFSQYVPIQTLEVRRRYKTEFE
SDYDEYRKLLTRVEDVRNRFQDLSERLESARRCDNGYGDYDHIKRQIVCE
YERINNDRTIGEDKERFDYLHAKLAHIKQLVMDYDKTLMSATMAMAPTDV
VAAQGPDPAVAKAAARLAEHHRRQHHAAETIKQQQQQKQTHQHHLQRHLQ
HHLQQQQNLLQQQQNLLQQQSVSNSDDSSDSSDSNDDDDDDDEDCDDSNS
NTDDDEARY*

LD12841.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:42:53
Subject Length Description Subject Range Query Range Score Percent Strand
Su(Tpl)-PC 1059 CG32217-PC 1..1059 1..1059 5453 100 Plus
Su(Tpl)-PB 1059 CG32217-PB 1..1059 1..1059 5453 100 Plus
Su(Tpl)-PA 1059 CG32217-PA 1..1059 1..1059 5453 100 Plus
Samuel-PE 846 CG31868-PE 140..696 180..737 239 23.4 Plus
Samuel-PD 846 CG31868-PD 140..696 180..737 239 23.4 Plus
Samuel-PE 846 CG31868-PE 77..539 275..761 181 23.4 Plus