Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
LD12841.complete Sequence
4290 bp assembled on 2008-09-26
GenBank Submission: BT058015.1
> LD12841.complete
GACGTGGCAGCCATGACGTGATTTCTGAGTTTTTGTTAAAGAGATTACAT
TATTAATTGTAGAGAAAACTGTTAATTAAGGGGAATACGTGCATTACTCG
CCACCGCCTACCGATTGCCAGTGTAAAGCCACAAATCCAAGTGAAATTAA
GTCAATGCAGTAACAAGGCAACGGAACAGAAATCAACAACACGTATACGC
TTGCACAGTATAGCAACAATCAACTCACAACAACAAGAAGTCAACGTCCA
ACAATTTAAAGCTCATATCTCGATTGACCGATAAGTCTAGACCACCAAAT
CGATAATACGCATTTACCAACACTGCTGTGGCAAGAGAGCAGAGCGAGTG
AGCGGGCAAAACAGCTGATTGCGACTGGCACACGGTTGTTGTTGCAGTCG
TGCTGTTTTTCTTTCTGTTTTGTTGGAACTTTATCGCTGCAGCGATAAAG
AGAGCGGAGCGCGAGAGGGAGAGCAGCACAAACTACTACGTGTGACGTGG
TGTGGGGGCATACAGGTGGCAAAACAGCTGTTTCAACAGCAAAACCAATC
TGTTTTTTATTAGAATACATAATCAATTTACCGCCTGCAGATTTCCAGCT
AAAAAACAAACTCACATACAACCAAAAAAACCAACAATATCTACAAAAAA
CAAACGTTAGCATCCAAGAGAGAGAAACTTCCAGTGGCAAGTTGTCTACT
TCCACAACGAGTGCTTCCCGTACTTCCCGTCCTTTCCACGAGATCAACCA
AGCCGGCGGCCACCTTCCACACAACAATAACTAGCACAGCCCAGCCCCTT
CCACAATTTCCAAGCTGGCCCAAACAACACAACCAAGTGCAACTTTCCAA
ACTACAACAACTACTACTGATCCGATCCATCACAATCCGTTTCATAAATT
TTCCGGAAACAATCGAGTGGCTATCTAATTGCTATCTAATTAGCGGCTAG
TTGCGCGCACGTTATGACCAATTCGATTGCGTCAACGAAATGCCTGCCCA
ATGCACTATCGACCGGCAATTATGGAATGTCCCAGAGCCACCGTTACACC
GATGATAGCAAGGAGTACATCATCGTCAAGCTTACCGATTCTGCCTTCCG
TGCGATCGAGGAATATCAGCGCGATGACAACGCTAAACGCCTGCAACCAG
GCCAAAGGGCCAAAATCCAATTTGTGGGCAACACGGGTGTCATACAGTTC
CCGCGACCAGCGACGGATGCTAATGGCATCCCTAATGCTAATGGCAATGG
CAGCGACGCGACTGGAGCAGGAGGAGGAGGTGGTAGAAAATTTGGCTTCA
CTATCAACAATATGGAGGGAACGCTTGAATGCGTTCAGCAGCAGCAACGG
AGCCTCGGAGTCCTCGGAGCGGTCACCCTGCGAATGCGGATTCATGCCAA
TGAAGATGTCTACGATTCGACACGCACAAAAATGGCCATTGCCGAGGAGA
CGGAGAAGAGCAAGTGCATCAGGGAAATCAAGCCGAATCAGTCGGATATC
GGGCGTAAGGTGAAGAAGCCGCCATCAGCAATCCAATCTTCTGCCTCAAC
CGCCTCAGCCTTCTCCTCCAACTCCTCTAACTCCGGTTTGACGACGACGG
CATTTCATCATCACAGCAACAGCAACAACAGTGGGAACAACAACAACAGG
AGCAGCAGCAGCAGCAATAGTTTTAATAGCAACAACCATAGTCGTAAGTT
AGGTTCATCGCCATTTAATGGCCTAGGCGTAGGATCCAGCAGCTCCTCCA
GCGCGTTTGCCTCGCGCTCGCCCAATCCCAGCACGCTGGGCGCTATCGGC
ACAGTCAATGGCTCTGGCGTTGTTGGTGGTCGCTATGGTGGCGGTGCAGC
CTCCTCGCTAGCTTCCACATTCGCCAACGGCATCTCACAGGGCTACCACA
ACCTGAGCGGCAGCTCGCCAAGAGACTCGATGACAGCGGGAACATCAAGT
GCGACTGCCTCATCAGTCATCTCCTCACGCAACAAGATGCCAAGCGGAGG
CCTTACCTCCTCCAACTCCAACTCCTCATCGTCCTCCAGGAGTGCCAATA
GCAAGTCTTCGGGCGGCAACAAGATGTCCGATGTGTCCAGGCGCAATATA
CGCGAACGGCTTATCCATCTGCTGGCCCTCAAGGCCTTCAAGAAGCCTGA
GCTCTTTGCGCGCCTGAAGAACGAAGGCATTCGGGATCGGGAGCGTAACC
AGATCACCAACATACTCATGGACATTAGCACCATGTCGCACAACACGTAC
AATCTGCGTCGCCAGATGTGGAACGATGTGGACGAGAACTGGCCCTTTTT
CAGCGAACAGGAGGTTCAGCAGCTGAAGCGACGCAAGCCTCAAAATCTGA
CACCGCCAATGAGTTCGGACGCGGGCAGTTCGACGTCCGGCCAGAGTCCA
ACATCGACGCACACGGGCAGTCCGCCGCCGCCTTCAAGTAATGGTGGTCC
CGGTGGAGTTGGAAGTGGAGCAGGCGGTACGAGCATGAAGCGGACCAGCC
TCGAGTACGACGAGACCATGTTCAGCACTGTTCAGCCCAAGAAGCAGCGC
ATCAGTCACTACAAGAAGGACACTCCGCCCTCGGGAACGTCGTACTCTTC
CGCTGGGGTATCGATGTCACTGGGTTCATCTGGATCATCCAGTCGGAGTC
GGTATACGCCGCCGCAACGCCAGCCTGGTCCATTGGATGATCACAGCACA
ACTGACCTTAGCTACAATGTGCTGGACAACATAGTAGAGTTTATGAGCTC
CACGGCAGCGGCGACGCAGCAATCGATGGAACAGCAGCAGCATCCGAGAA
GCAACAGTAGTAATAACAGACGTGGAAGCTCCTCGTTGGCGGGCACCAGC
AATGGGGGCAACAACAAGGATAAGCGGAACTCTACGGGCAGCAATTCAAG
CAGCTCCAGTGGCTATGAGACGCAACAGGATCGCCAGCGTTCAACAACGC
CGATGTCGTCAAACCGCAGCAGCGCATCCTCTTCAACGACGCCGCCGAAG
CTTGCGGCCAGTTTTGTGCCCGCGGCCACCTCTGGATCCGCTTCCGGTAC
CAGCAAACAACGTATGCCGCCCCAGCAAAGCGACTACAACTCGTACAACA
GCAATAACGCTCAACATGTGGCGTCCAACAGCAAAAAAAGGATGGGTAGT
GTTGGTCCTAGTGGTGGATCGAATGGCCAGCGTCAAAGAAGTGCCAGTGG
CTCTAATTCTGGCTATCAACAGGTGCCGCCACCCTCGTCCAACTCGCGGT
CGTCTATCCAGCAGCAGAATCAGCACCAGAAGCAGCAGGTGCAACAGAAG
CAGGCGCCGTCGCAGCAGCAGCAGCAGCAGCAACAGCAATACCATCAGCA
AGCCAAGCATCCATCGCCATCGCAGCAGTTGGCTGCTGCTGCCCATGCCT
ATGCCCATGCCACCGCGGATACGGACTCATCCGCCACGCCGCGCTACGAC
TTCAGCCAATACGTGCCCATCCAGACCCTGGAGGTGCGGCGCCGTTACAA
GACTGAGTTCGAAAGCGACTACGATGAGTACCGCAAGCTGCTGACGCGCG
TCGAGGATGTGCGCAATCGTTTCCAGGACTTATCCGAACGTCTGGAGAGC
GCCAGGCGCTGTGACAACGGATACGGGGACTACGATCACATCAAGCGGCA
GATTGTGTGCGAATACGAGCGGATCAATAACGATCGCACCATTGGAGAGG
ACAAGGAGCGTTTTGATTACCTGCACGCCAAGCTGGCGCACATCAAGCAG
CTGGTGATGGACTATGACAAGACTTTGATGAGTGCCACGATGGCGATGGC
GCCCACGGACGTCGTTGCTGCTCAAGGGCCCGATCCAGCTGTGGCTAAGG
CGGCGGCCAGGTTAGCCGAACATCATCGTCGGCAACATCACGCCGCAGAG
ACGATAAAACAACAGCAGCAGCAAAAGCAGACACATCAGCATCATTTGCA
GCGTCATTTGCAGCATCATTTGCAGCAGCAACAAAATCTACTGCAGCAGC
AACAAAATCTACTGCAGCAGCAGAGTGTGAGTAATTCGGATGACAGTTCG
GATAGCTCGGATTCCAATGATGACGACGACGACGACGATGAGGACTGCGA
TGATTCCAACTCTAATACCGATGACGATGAGGCACGCTACTGATCCTGAT
CCTGATCCTGCTGGGACTACTTCGATGAGACCATCCGCAGATTCCCATGT
AAAAAGGCAAAACAAGCAAGAAACTAATATACATAAATACAACACTATTG
TAGTAAAAACGCAAAACAAAAGAAAAAAAAAAAAAAAAAA
LD12841.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:09:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Su(Tpl)-RB | 4568 | Su(Tpl)-RB | 132..4420 | 1..4289 | 21430 | 99.9 | Plus |
Su(Tpl).b | 4732 | Su(Tpl).b | 16..4304 | 1..4289 | 21430 | 99.9 | Plus |
Su(Tpl).a | 4737 | Su(Tpl).a | 16..4309 | 1..4289 | 21355 | 99.8 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:45:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 19880738..19884381 | 4272..629 | 18145 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 19886247..19886594 | 578..231 | 1740 | 100 | Minus |
chr3L | 24539361 | chr3L | 19898575..19898711 | 139..1 | 630 | 98.6 | Minus |
chr3L | 24539361 | chr3L | 19886653..19886743 | 230..140 | 455 | 100 | Minus |
chr3L | 24539361 | chr3L | 19886133..19886182 | 628..579 | 250 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:59:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19891378..19895038 | 4289..629 | 18290 | 100 | Minus |
3L | 28110227 | 3L | 19896912..19897259 | 578..231 | 1740 | 100 | Minus |
3L | 28110227 | 3L | 19909247..19909385 | 139..1 | 695 | 100 | Minus |
3L | 28110227 | 3L | 19897318..19897408 | 230..140 | 455 | 100 | Minus |
3L | 28110227 | 3L | 19896798..19896847 | 628..579 | 250 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:27:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 19884478..19888138 | 4289..629 | 18290 | 99.9 | Minus |
3L | 28103327 | 3L | 19890012..19890359 | 578..231 | 1740 | 100 | Minus |
3L | 28103327 | 3L | 19902347..19902485 | 139..1 | 695 | 100 | Minus |
3L | 28103327 | 3L | 19890418..19890508 | 230..140 | 455 | 100 | Minus |
3L | 28103327 | 3L | 19889898..19889947 | 628..579 | 250 | 100 | Minus |
Blast to na_te.dros performed 2019-03-15 18:45:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2773..2964 | 2746..2938 | 188 | 61 | Plus |
LD12841.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:45:50 Download gff for
LD12841.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 19880756..19880879 | 4131..4254 | 100 | == | Minus |
chr3L | 19880946..19881025 | 3985..4064 | 100 | == | Minus |
chr3L | 19881103..19881658 | 3352..3907 | 100 | == | Minus |
chr3L | 19881758..19883323 | 1687..3252 | 99 | == | Minus |
chr3L | 19883397..19884381 | 629..1613 | 99 | <- | Minus |
chr3L | 19886133..19886182 | 579..628 | 100 | <- | Minus |
chr3L | 19886247..19886594 | 231..578 | 100 | <- | Minus |
chr3L | 19886653..19886743 | 140..230 | 100 | <- | Minus |
chr3L | 19898575..19898711 | 1..139 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:39:10 Download gff for
LD12841.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(Tpl)-RA | 1..3180 | 964..4143 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:14:06 Download gff for
LD12841.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(Tpl)-RB | 1..3180 | 964..4143 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:29:40 Download gff for
LD12841.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(Tpl)-RA | 1..3180 | 964..4143 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:59:14 Download gff for
LD12841.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(Tpl)-RA | 1..3180 | 964..4143 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:39:10 Download gff for
LD12841.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(Tpl)-RA | 643..4120 | 795..4272 | 100 | | Plus |
Su(Tpl)-RA | 1..633 | 1..628 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:14:05 Download gff for
LD12841.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(Tpl)-RB | 16..4277 | 1..4262 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:29:40 Download gff for
LD12841.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(Tpl)-RB | 26..4297 | 1..4272 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-29 18:11:01 Download gff for
LD12841.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(Tpl)-RA | 1..633 | 1..628 | 99 | == | Plus |
Su(Tpl)-RA | 643..4120 | 795..4272 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:59:14 Download gff for
LD12841.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(Tpl)-RB | 26..4297 | 1..4272 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:50 Download gff for
LD12841.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19891395..19895038 | 629..4272 | 100 | <- | Minus |
3L | 19896798..19896847 | 579..628 | 100 | <- | Minus |
3L | 19896912..19897259 | 231..578 | 100 | <- | Minus |
3L | 19897318..19897408 | 140..230 | 100 | <- | Minus |
3L | 19909247..19909385 | 1..139 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:50 Download gff for
LD12841.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19891395..19895038 | 629..4272 | 100 | <- | Minus |
3L | 19896798..19896847 | 579..628 | 100 | <- | Minus |
3L | 19896912..19897259 | 231..578 | 100 | <- | Minus |
3L | 19897318..19897408 | 140..230 | 100 | <- | Minus |
3L | 19909247..19909385 | 1..139 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:50 Download gff for
LD12841.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19891395..19895038 | 629..4272 | 100 | <- | Minus |
3L | 19896798..19896847 | 579..628 | 100 | <- | Minus |
3L | 19896912..19897259 | 231..578 | 100 | <- | Minus |
3L | 19897318..19897408 | 140..230 | 100 | <- | Minus |
3L | 19909247..19909385 | 1..139 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:29:40 Download gff for
LD12841.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19890418..19890508 | 140..230 | 100 | <- | Minus |
arm_3L | 19902347..19902485 | 1..139 | 100 | | Minus |
arm_3L | 19884495..19888138 | 629..4272 | 100 | <- | Minus |
arm_3L | 19889898..19889947 | 579..628 | 100 | <- | Minus |
arm_3L | 19890012..19890359 | 231..578 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:44:45 Download gff for
LD12841.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19884495..19888138 | 629..4272 | 100 | <- | Minus |
3L | 19889898..19889947 | 579..628 | 100 | <- | Minus |
3L | 19890012..19890359 | 231..578 | 100 | <- | Minus |
3L | 19890418..19890508 | 140..230 | 100 | <- | Minus |
3L | 19902347..19902485 | 1..139 | 100 | | Minus |
LD12841.pep Sequence
Translation from 963 to 4142
> LD12841.pep
MTNSIASTKCLPNALSTGNYGMSQSHRYTDDSKEYIIVKLTDSAFRAIEE
YQRDDNAKRLQPGQRAKIQFVGNTGVIQFPRPATDANGIPNANGNGSDAT
GAGGGGGRKFGFTINNMEGTLECVQQQQRSLGVLGAVTLRMRIHANEDVY
DSTRTKMAIAEETEKSKCIREIKPNQSDIGRKVKKPPSAIQSSASTASAF
SSNSSNSGLTTTAFHHHSNSNNSGNNNNRSSSSSNSFNSNNHSRKLGSSP
FNGLGVGSSSSSSAFASRSPNPSTLGAIGTVNGSGVVGGRYGGGAASSLA
STFANGISQGYHNLSGSSPRDSMTAGTSSATASSVISSRNKMPSGGLTSS
NSNSSSSSRSANSKSSGGNKMSDVSRRNIRERLIHLLALKAFKKPELFAR
LKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWNDVDENWPFFSEQE
VQQLKRRKPQNLTPPMSSDAGSSTSGQSPTSTHTGSPPPPSSNGGPGGVG
SGAGGTSMKRTSLEYDETMFSTVQPKKQRISHYKKDTPPSGTSYSSAGVS
MSLGSSGSSSRSRYTPPQRQPGPLDDHSTTDLSYNVLDNIVEFMSSTAAA
TQQSMEQQQHPRSNSSNNRRGSSSLAGTSNGGNNKDKRNSTGSNSSSSSG
YETQQDRQRSTTPMSSNRSSASSSTTPPKLAASFVPAATSGSASGTSKQR
MPPQQSDYNSYNSNNAQHVASNSKKRMGSVGPSGGSNGQRQRSASGSNSG
YQQVPPPSSNSRSSIQQQNQHQKQQVQQKQAPSQQQQQQQQQYHQQAKHP
SPSQQLAAAAHAYAHATADTDSSATPRYDFSQYVPIQTLEVRRRYKTEFE
SDYDEYRKLLTRVEDVRNRFQDLSERLESARRCDNGYGDYDHIKRQIVCE
YERINNDRTIGEDKERFDYLHAKLAHIKQLVMDYDKTLMSATMAMAPTDV
VAAQGPDPAVAKAAARLAEHHRRQHHAAETIKQQQQQKQTHQHHLQRHLQ
HHLQQQQNLLQQQQNLLQQQSVSNSDDSSDSSDSNDDDDDDDEDCDDSNS
NTDDDEARY*
LD12841.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:50:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF10841-PA | 1110 | GF10841-PA | 1..1110 | 1..1059 | 2500 | 61 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Su(Tpl)-PC | 1059 | CG32217-PC | 1..1059 | 1..1059 | 5453 | 100 | Plus |
Su(Tpl)-PB | 1059 | CG32217-PB | 1..1059 | 1..1059 | 5453 | 100 | Plus |
Su(Tpl)-PA | 1059 | CG32217-PA | 1..1059 | 1..1059 | 5453 | 100 | Plus |
Mur89F-PC | 2158 | CG4090-PC | 219..888 | 102..804 | 283 | 23.3 | Plus |
Mur89F-PB | 2159 | CG4090-PB | 219..888 | 102..804 | 283 | 23.3 | Plus |
Mur89F-PC | 2158 | CG4090-PC | 555..1120 | 188..764 | 272 | 23.4 | Plus |
Mur89F-PB | 2159 | CG4090-PB | 555..1120 | 188..764 | 272 | 23.4 | Plus |
Mur89F-PC | 2158 | CG4090-PC | 405..1038 | 175..828 | 251 | 22.7 | Plus |
Mur89F-PB | 2159 | CG4090-PB | 405..1038 | 175..828 | 251 | 22.7 | Plus |
Hr4-PE | 1842 | CG43934-PE | 124..899 | 217..1020 | 241 | 21.2 | Plus |
Hr4-PK | 1843 | CG43934-PK | 124..899 | 217..1020 | 241 | 21.2 | Plus |
Hr4-PJ | 1843 | CG43934-PJ | 124..899 | 217..1020 | 241 | 21.2 | Plus |
Hr4-PG | 1986 | CG43934-PG | 267..1042 | 217..1020 | 241 | 21.2 | Plus |
Samuel-PE | 846 | CG31868-PE | 140..696 | 180..737 | 239 | 23.4 | Plus |
Samuel-PD | 846 | CG31868-PD | 140..696 | 180..737 | 239 | 23.4 | Plus |
Samuel-PB | 968 | CG31868-PB | 140..696 | 180..737 | 239 | 23.4 | Plus |
Samuel-PA | 968 | CG31868-PA | 140..696 | 180..737 | 239 | 23.4 | Plus |
Alh-PP | 1717 | CG1070-PP | 553..1330 | 82..817 | 236 | 21.3 | Plus |
Alh-PL | 1332 | CG1070-PL | 261..916 | 177..769 | 228 | 22.4 | Plus |
Alh-PK | 1385 | CG1070-PK | 314..969 | 177..769 | 228 | 22.4 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 455..1124 | 145..826 | 227 | 18.5 | Plus |
Alh-PF | 1165 | CG1070-PF | 122..778 | 187..817 | 226 | 22.2 | Plus |
sbb-PE | 929 | CG5580-PE | 251..841 | 190..826 | 221 | 23.5 | Plus |
sbb-PC | 929 | CG5580-PC | 251..841 | 190..826 | 221 | 23.5 | Plus |
sbb-PF | 939 | CG5580-PF | 261..851 | 190..826 | 221 | 23.5 | Plus |
sbb-PH | 2302 | CG5580-PH | 251..841 | 190..826 | 221 | 23.5 | Plus |
sbb-PD | 2302 | CG5580-PD | 251..841 | 190..826 | 221 | 23.5 | Plus |
sbb-PG | 2312 | CG5580-PG | 261..851 | 190..826 | 221 | 23.5 | Plus |
sbb-PJ | 2330 | CG5580-PJ | 261..851 | 190..826 | 221 | 23.5 | Plus |
Alh-PP | 1717 | CG1070-PP | 244..954 | 167..824 | 218 | 21.1 | Plus |
Alh-PD | 1323 | CG1070-PD | 191..901 | 167..824 | 218 | 21.1 | Plus |
Alh-PA | 1376 | CG1070-PA | 244..954 | 167..824 | 218 | 21.1 | Plus |
Alh-PL | 1332 | CG1070-PL | 191..910 | 167..824 | 215 | 21.2 | Plus |
Alh-PK | 1385 | CG1070-PK | 244..963 | 167..824 | 215 | 21.2 | Plus |
Alh-PP | 1717 | CG1070-PP | 314..960 | 177..769 | 214 | 22.2 | Plus |
Alh-PD | 1323 | CG1070-PD | 261..907 | 177..769 | 214 | 22.2 | Plus |
Alh-PA | 1376 | CG1070-PA | 314..960 | 177..769 | 214 | 22.2 | Plus |
sbb-PE | 929 | CG5580-PE | 233..797 | 175..750 | 213 | 21.9 | Plus |
sbb-PC | 929 | CG5580-PC | 233..797 | 175..750 | 213 | 21.9 | Plus |
sbb-PF | 939 | CG5580-PF | 243..807 | 175..750 | 213 | 21.9 | Plus |
sbb-PH | 2302 | CG5580-PH | 233..797 | 175..750 | 213 | 21.9 | Plus |
sbb-PD | 2302 | CG5580-PD | 233..797 | 175..750 | 213 | 21.9 | Plus |
sbb-PG | 2312 | CG5580-PG | 243..807 | 175..750 | 213 | 21.9 | Plus |
sbb-PJ | 2330 | CG5580-PJ | 243..807 | 175..750 | 213 | 21.9 | Plus |
nocte-PD | 2305 | CG17255-PD | 1088..1724 | 253..805 | 211 | 23.2 | Plus |
nocte-PB | 2309 | CG17255-PB | 1088..1724 | 253..805 | 211 | 23.2 | Plus |
nocte-PA | 2309 | CG17255-PA | 1088..1724 | 253..805 | 211 | 23.2 | Plus |
nocte-PC | 2309 | CG17255-PC | 1088..1724 | 253..805 | 211 | 23.2 | Plus |
Mur89F-PC | 2158 | CG4090-PC | 799..1324 | 162..678 | 196 | 22.2 | Plus |
Mur89F-PB | 2159 | CG4090-PB | 799..1324 | 162..678 | 196 | 22.2 | Plus |
Hr4-PF | 1611 | CG43934-PF | 11..668 | 341..1020 | 196 | 22.2 | Plus |
Hr4-PC | 1518 | CG43934-PC | 134..575 | 591..1020 | 189 | 23 | Plus |
Hr4-PD | 1529 | CG43934-PD | 144..585 | 591..1020 | 189 | 23 | Plus |
Hr4-PH | 1863 | CG43934-PH | 134..575 | 591..1020 | 189 | 23 | Plus |
Hr4-PI | 2123 | CG43934-PI | 134..575 | 591..1020 | 189 | 23 | Plus |
mask-PF | 3623 | CG33106-PF | 2508..3074 | 228..805 | 185 | 22.9 | Plus |
mask-PD | 3636 | CG33106-PD | 2521..3087 | 228..805 | 185 | 22.9 | Plus |
mask-PE | 4000 | CG33106-PE | 2885..3451 | 228..805 | 185 | 22.9 | Plus |
mask-PB | 4001 | CG33106-PB | 2886..3452 | 228..805 | 185 | 22.9 | Plus |
mask-PA | 4001 | CG33106-PA | 2886..3452 | 228..805 | 185 | 22.9 | Plus |
mask-PC | 4010 | CG33106-PC | 2895..3461 | 228..805 | 185 | 22.9 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 359..1054 | 151..838 | 183 | 18.7 | Plus |
Samuel-PE | 846 | CG31868-PE | 77..539 | 275..761 | 181 | 23.4 | Plus |
Samuel-PD | 846 | CG31868-PD | 77..539 | 275..761 | 181 | 23.4 | Plus |
Samuel-PB | 968 | CG31868-PB | 77..539 | 275..761 | 181 | 23.4 | Plus |
Samuel-PA | 968 | CG31868-PA | 77..539 | 275..761 | 181 | 23.4 | Plus |
Alh-PP | 1717 | CG1070-PP | 798..1341 | 192..774 | 177 | 22.9 | Plus |
Alh-PF | 1165 | CG1070-PF | 246..789 | 192..774 | 177 | 22.9 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 147..737 | 175..832 | 175 | 18.3 | Plus |
tn-PF | 827 | CG15105-PF | 490..792 | 448..763 | 175 | 25.9 | Plus |
Atx2-PA | 888 | CG5166-PA | 294..635 | 466..835 | 175 | 23.9 | Plus |
Atx2-PD | 1023 | CG5166-PD | 294..635 | 466..835 | 175 | 23.9 | Plus |
Atx2-PC | 1023 | CG5166-PC | 294..635 | 466..835 | 175 | 23.9 | Plus |
Atx2-PB | 1084 | CG5166-PB | 355..696 | 466..835 | 175 | 23.9 | Plus |
tn-PA | 1353 | CG15105-PA | 490..792 | 448..763 | 175 | 25.9 | Plus |
tn-PB | 1353 | CG15105-PB | 490..792 | 448..763 | 175 | 25.9 | Plus |
Pdp1-PJ | 633 | CG17888-PJ | 17..245 | 596..830 | 174 | 26.9 | Plus |
Pdp1-PD | 647 | CG17888-PD | 17..245 | 596..830 | 174 | 26.9 | Plus |
Mur89F-PC | 2158 | CG4090-PC | 165..471 | 542..832 | 169 | 24.8 | Plus |
Mur89F-PB | 2159 | CG4090-PB | 165..471 | 542..832 | 169 | 24.8 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:51:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI13662-PA | 1071 | GI13662-PA | 1..936 | 1..939 | 2276 | 58.7 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:51:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA23928-PA | 1115 | GA23928-PA | 1..1004 | 1..940 | 2481 | 64.9 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:51:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM15678-PA | 1057 | GM15678-PA | 1..979 | 1..981 | 3626 | 94.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:51:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD12242-PA | 1056 | GD12242-PA | 1..978 | 1..981 | 3633 | 93.7 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:51:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ13997-PA | 835 | GJ13997-PA | 16..715 | 265..940 | 1561 | 59.3 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:51:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK17503-PA | 1144 | GK17503-PA | 1..615 | 1..594 | 1613 | 61.8 | Plus |
LD12841.hyp Sequence
Translation from 963 to 4142
> LD12841.hyp
MTNSIASTKCLPNALSTGNYGMSQSHRYTDDSKEYIIVKLTDSAFRAIEE
YQRDDNAKRLQPGQRAKIQFVGNTGVIQFPRPATDANGIPNANGNGSDAT
GAGGGGGRKFGFTINNMEGTLECVQQQQRSLGVLGAVTLRMRIHANEDVY
DSTRTKMAIAEETEKSKCIREIKPNQSDIGRKVKKPPSAIQSSASTASAF
SSNSSNSGLTTTAFHHHSNSNNSGNNNNRSSSSSNSFNSNNHSRKLGSSP
FNGLGVGSSSSSSAFASRSPNPSTLGAIGTVNGSGVVGGRYGGGAASSLA
STFANGISQGYHNLSGSSPRDSMTAGTSSATASSVISSRNKMPSGGLTSS
NSNSSSSSRSANSKSSGGNKMSDVSRRNIRERLIHLLALKAFKKPELFAR
LKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWNDVDENWPFFSEQE
VQQLKRRKPQNLTPPMSSDAGSSTSGQSPTSTHTGSPPPPSSNGGPGGVG
SGAGGTSMKRTSLEYDETMFSTVQPKKQRISHYKKDTPPSGTSYSSAGVS
MSLGSSGSSSRSRYTPPQRQPGPLDDHSTTDLSYNVLDNIVEFMSSTAAA
TQQSMEQQQHPRSNSSNNRRGSSSLAGTSNGGNNKDKRNSTGSNSSSSSG
YETQQDRQRSTTPMSSNRSSASSSTTPPKLAASFVPAATSGSASGTSKQR
MPPQQSDYNSYNSNNAQHVASNSKKRMGSVGPSGGSNGQRQRSASGSNSG
YQQVPPPSSNSRSSIQQQNQHQKQQVQQKQAPSQQQQQQQQQYHQQAKHP
SPSQQLAAAAHAYAHATADTDSSATPRYDFSQYVPIQTLEVRRRYKTEFE
SDYDEYRKLLTRVEDVRNRFQDLSERLESARRCDNGYGDYDHIKRQIVCE
YERINNDRTIGEDKERFDYLHAKLAHIKQLVMDYDKTLMSATMAMAPTDV
VAAQGPDPAVAKAAARLAEHHRRQHHAAETIKQQQQQKQTHQHHLQRHLQ
HHLQQQQNLLQQQQNLLQQQSVSNSDDSSDSSDSNDDDDDDDEDCDDSNS
NTDDDEARY*
LD12841.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:42:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Su(Tpl)-PC | 1059 | CG32217-PC | 1..1059 | 1..1059 | 5453 | 100 | Plus |
Su(Tpl)-PB | 1059 | CG32217-PB | 1..1059 | 1..1059 | 5453 | 100 | Plus |
Su(Tpl)-PA | 1059 | CG32217-PA | 1..1059 | 1..1059 | 5453 | 100 | Plus |
Samuel-PE | 846 | CG31868-PE | 140..696 | 180..737 | 239 | 23.4 | Plus |
Samuel-PD | 846 | CG31868-PD | 140..696 | 180..737 | 239 | 23.4 | Plus |
Samuel-PE | 846 | CG31868-PE | 77..539 | 275..761 | 181 | 23.4 | Plus |