Clone LD12965 Report

Search the DGRC for LD12965

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:129
Well:65
Vector:pBS SK-
Associated Gene/TranscriptMap205-RA
Protein status:LD12965.pep: gold
Preliminary Size:3811
Sequenced Size:4225

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1483 2001-01-01 Release 2 assignment
CG1483 2003-01-01 Sim4 clustering to Release 3
CG1483 2003-01-14 Blastp of sequenced clone
Map205 2008-04-29 Release 5.5 accounting
Map205 2008-08-15 Release 5.9 accounting
Map205 2008-12-18 5.12 accounting

Clone Sequence Records

LD12965.complete Sequence

4225 bp (4225 high quality bases) assembled on 2003-01-14

GenBank Submission: BT003276

> LD12965.complete
GCGCAAAAATTGGTCGGCAAGCAATTCAAAAGTAAGAGCAACCGGAGCGA
ACAAAAAAGGGAATAACTTACTAAAATCTCTGAAAGAAAAATAAAAAGAC
TAACGGGCTCGGCAAGCTGTGTTTATTTCGACAAGTAATTATATACTTGG
AGTGCAAGCAAAGGCGAAGGAAGTGGAAGGACAAGCAACGAAATCGTGCT
CTTATCCGTTCCTGTACTGTGTCTCTCTTTCGCTGGGAGAGTGTGTGTAT
TGGTGTGAGTGTAGAAATCTGCAAGAACAGCAACGCCAATAAAAGTGGAA
TCGAGAAAAAAAACGCAGTGGCGCGTGAATCACGAGCAATCTGAATCATC
TCTCTACAAAAATACCTGTTTCTGTTGGCGCATCATTTATACCAATTAAA
TCCTAAAGGATGGAACACCACGAGGACAACGCGCAGTTGGACAACTACTT
GCAGAACCGCCTGGCCGAAAGTCTGCAAATTTGCGGAGGCGCCGGCGAGC
ATAATCCTCATCTGGCAGACGCTACTGGGGGGAACGGCTGCGCTCCTGGC
ATTGCGCCCTCAAAGTCGGACGAAGTCGACGGGGAAGAAGACGAGGAGTG
GAAGTACATACACGAGGTGCGGCAGAGTGAAAAGCTTCAACAGGAAAAGC
TTCCACTGACAAAGGAAACCGGCAATGGCTTCGGGCCCGGACGGGACTCA
GATAATCAAGTTCACGGAAACGGAGCTGCCGCTGTCTTCAATCTGTACGA
AGAGGACGTGGAAGTGATCAAGAACGATGGTGACTTCTCGACAAATTCTA
ACACCACTACTTCAACGGACGAGGTAGTTGCCAGGCAGGCCCAGGAGCCA
AACCAGTTGCCGGAGCAGCTTCAACAGCAGCAGCAGATAGAATCACAAGG
TGTTCACGAGGATCCCCGTCAGGAAGATGAGGATGAGCACAGCTCCGTGG
CCACTACTTATGGAACAAGCAGTCTCAGTGAGAACAACTCCTCGCCTTTA
GATCAGGAGGAGGTCGTTATGGTGGCCCAAACGGTTGGTCAAGAGCAGTT
AGTGGACTTCGACAACAAGGAAAACTCCTATTTTGTTAAAAACCTGGAAG
AAAACCACTCGCAGCTAAACCCCAATGCTGTGGCCTTTGTGCCTGGCGTT
GGCTCACAATCATCCTCTCCCCTTCCTGCTGCTGAAGATCCACTACCTGG
TGTTCAGCCCCGCCCATTTCTACCGGGAGGGACCCTTGACGATTTGGTGG
CGGAAAGTCCGCGGAAAGAATTCGCCCGAATCAACATGGATGGTATTGCC
GTGCCCGACGAGCGGGAATTTGACATTGAAGCGGATATGCGACCCCACGA
GTTGGAGCAGGAATCGGACACTTTTGGGGCAGGACACCTGGAGATGCAGT
TGTTGAACGGTATAGGAACCGCTGACCAAGCAGCCTTAAGGGATGTTCTG
GATCACGGTCCAGAGACAAGTGTCGATATGGAGTTGCCACTAGATCAGGT
GCCCAACGACGCCGACATCATGAAACAATCGATTTATGCCGAGCACAACT
CCTCCATTGAAGATATCTTAAATTCCGTGCAACCTTTGCCAATTCAGACT
TGTGACGATAAGGAACTAATTCATGTGGAAGAGAAAGAACATGTCTCGAA
GTCGCCTTCTACAGAGGAGCTCCAGTTTCAGTCCGACTTCCCAAACAATC
AGGAATCGCACACATTATTCAATAACACTGAGCAGGATCCAATGCAGGCT
TCATTTTATTTGGAACATACCTCTCAAAAGGCTCAAGAGGGCTGCCAGGA
GCAAATGCAGCTTCCCGCTGAGTGCTCTGATATTTTTGCCGACCAGAGTT
TATTGCTAGACACCAGTGCACCCCAGTTGAGCTCCGAAGCAGACTCGCCT
GTGGCGAAATTGGAGCTGGAATCCCAGCAAGCTGGCATTGTAGACATCAC
ACCTTCGCCCCTTTCTTCCACTGCAGAGAAACATCTGGTTGAAGACACCA
AGGAGCTAGTTGAGGAGTACACGTTGGATCCGGAATCCCATTTCTTTGGG
GTTGTTTCATCTCAAGCTCCTCTACAGAACGACGAGGAAAATGCTGTTTT
TGAATCAGTTTCTGGTTATGAAACTCAAAACTTTGATGAAATATCATCTC
CACCGGAAGGTATTAATCCGTTTGCCCAGCCCTTCACGCCCGCCCACCTG
GTGATAGAGCAGGCGAATACAATGATGGAGGATGTGGGAGGTATGCCTAT
ACCAGCTTCCGAGGACTTTGCTATATGTGATAAAGTTGCTAGTAAGTCTT
CAAATGAAGTAGAGGATCATAGGAGTGAGCAACAAGCCTTTGTAAAGGAG
GAGCTGCTGCACCCTGTTGGAGATGTTGTTGCCCAGGTTGAAAATCTTGG
CACTGAAAAGAACTTCGTTGTTGAAGAAGAGCGACTTCCTATTTCTGTTT
CAGATGAGATACCGCTTTCTTCGGCTTCAAAGGAGAAACTGTTGCCTGAT
ACTACAGATGAGCAACTGCTGACTTCTGCTTTGGAGGAGAAACTGCGCTC
TGTTGCTCCAGAGGAGTCAGTGTCAACTGCTGCCGATGGGCAGTCAATTT
CTCAGTTTGATGAATATGTTATCGCAAGTAATAAACCTTTGGAAGATATT
TTAGAACCGGAAAAAGATGTCGAAGTTGCGAAAAGTTTGTCTGAAAAAAC
TTCTGTTGCTACAGTGGCTGGAGGTGCTGTGGTTGGTGCTACCAAAACCC
ACTCAGCCACCAAAGCAGGATCTACAGCAGCTAGTGCAAAATCGAAAACA
GAAACCCTTGTAATGAAGAAGACTACAGCGAGTTCTACTTCTGTTTACGG
GGCAAACAAGTCGGCCGCTCCACGTCCAAGTACCGCCCGCCTTGGAATCA
AAAGTACCAGTATAGCTACAAAAACTTCGACTACATCTTCACTAACTGGA
AATCCCCGAAAGTCACTAAGCAGTAATGTAGGATCAACAGTTAAACCACC
AACCAAGTTAAGCGGCACACGACCAGCTACAGCTCCAGTGAGCAAGGTAA
CTTTAGGGGCCAAGACCATAACTAACAAGCCGACTGCAAGTGGTACTGCA
TCTGATAATGTAACCAGGACAACACTTCGCCCTTTGGTCAGTACCAACGC
TCGCAGACCAGCAACAAGTGGAACAGGATCTGTAGCCTCCTCAACTGCTC
GACGACCAGTTACAAATGCAAAAGGATCTGCTCCTGGCAGCGCTGCTTCA
ACAAAAGTTCGCCCTGCGGCCACAATGACAGCCCCAGTCAAGCCTAAAGT
TTTGTCGCCGCGCAGCACCATTTCCTCCACCACCACTGTGCGAAAGGTGC
CTAGCACAAGTACCCCTTCATTTTCTACTCGTAGCCCTAACAAGCAGCAA
TCCAATGGATTGGGCAAGAATACCAGCTCTACCACCACTTCCACTGCTAC
CGCAACTATCACAAAATCTTTCACAGCTCGCTCAGCTCCAAAGTTTACGC
ATTCAGCTAGCTTAACCTATAACAATGGGAGTACATCTCGTCGTTTGCTG
GTTCCTGGAAGCTCCTCTACTACAACTACGTCCTCTCTTAGGAAGTCATC
ACCATTAAAGGCAGCACCAGGCAAAGCTGCTTCCAAGCCATTGACACCGC
AATCCAAAGATGGCACGGCTAAGTCATCGCCGGCTGTATTAAAAGCTCGG
AATTCTACTTTGATGGGCGGGGAAGGGGTAGCACCATCAAATGAATGTGT
CCCAACACCTAATGGTCAGATCAATGCGGAAGAAGTGGTCAAGCTTAAGG
GAAAGGGCCTAGCAGAAGAGGTTAAGATTATTGAAGAGCAAAAGCTTCAC
GAACAAGATGTCCCTGCCCATAATGCTGAAGTGCCCCTTTTGGATTTTTA
ATATGTATCCTAAATTCCAGATCACACAAACCTAAAATTACTTTATTAAT
ACTGAAAACATATTGAGAAAAAGTGTTTAAAACGAACAGAAAAAAATTTC
GAAGACGTAATAAGAAAAACGATGAATACAATAGCATCCTGGTAACCAAA
TTAGGAATTTTTGCTTATTGAACTTATTTATATACGATTATACCCTCGAT
TTCTTGCTACATATTATTAAATCATTTTATTTCAAAAAATAATGAACTAC
TGTAATGAACGCAGAGCGAATAAATGTTTGTGCTATTTTGTAACGAAAAC
GAAAGATAAAAAAAAAAAAAAAAAA

LD12965.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:26:52
Subject Length Description Subject Range Query Range Score Percent Strand
Map205.d 5273 Map205.d 48..4257 1..4210 21050 100 Plus
Map205-RA 4732 Map205-RA 52..4261 1..4210 21050 100 Plus
Map205.e 5325 Map205.e 2179..4311 2078..4210 10665 100 Plus
Map205.e 5325 Map205.e 36..2112 1..2077 10385 100 Plus
Map205.d 5273 Map205.d 4376..4478 3985..4084 235 83.4 Plus
Map205-RA 4732 Map205-RA 4380..4482 3985..4084 235 83.4 Plus
Map205.e 5325 Map205.e 4430..4532 3985..4084 235 83.4 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:17:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 27879118..27881250 4207..2075 10650 100 Minus
chr3R 27901430 chr3R 27888428..27890503 2077..1 10320 99.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:00:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:17:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 32057013..32059148 4210..2075 10680 100 Minus
3R 32079331 3R 32066329..32068405 2077..1 10385 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:03:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 31797844..31799979 4210..2075 10680 100 Minus
3R 31820162 3R 31807160..31809236 2077..1 10385 100 Minus
3L 28103327 3L 22975..23150 1100..1272 240 76.7 Plus
3R 31820162 3R 31797623..31797725 4084..3985 235 83.4 Minus
Blast to na_te.dros performed 2019-03-16 11:17:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6915 835..1011 161 58.8 Plus
roo 9092 roo DM_ROO 9092bp 1049..1187 843..979 156 62.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2262..2357 789..886 143 62.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6721..6824 841..943 138 62.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2332..2523 800..991 130 54.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2389 835..897 126 66.7 Plus
roo 9092 roo DM_ROO 9092bp 1038..1138 790..886 126 64.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..6862 835..940 124 59.8 Plus

LD12965.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:18:55 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 27879118..27881247 2078..4207 99 <- Minus
chr3R 27888428..27890503 1..2077 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:21:46 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
Map205-RA 1..3492 410..3901 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:57:31 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
Map205-RA 1..3492 410..3901 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:12:23 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
Map205-RA 1..3492 410..3901 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:48:20 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
Map205-RA 1..3492 410..3901 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:10:50 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
Map205-RA 1..3492 410..3901 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:21:46 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
Map205-RA 36..4242 1..4207 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:57:31 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
Map205-RA 36..4242 1..4207 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:12:23 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
Map205-RA 37..4243 1..4207 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:48:20 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
Map205-RA 36..4242 1..4207 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:10:50 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
Map205-RA 37..4243 1..4207 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:18:55 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
3R 32057016..32059145 2078..4207 100 <- Minus
3R 32066329..32068405 1..2077 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:18:55 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
3R 32057016..32059145 2078..4207 100 <- Minus
3R 32066329..32068405 1..2077 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:18:55 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
3R 32057016..32059145 2078..4207 100 <- Minus
3R 32066329..32068405 1..2077 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:12:23 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27892051..27894127 1..2077 100   Minus
arm_3R 27882738..27884867 2078..4207 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:19:44 Download gff for LD12965.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31797847..31799976 2078..4207 100 <- Minus
3R 31807160..31809236 1..2077 100   Minus

LD12965.pep Sequence

Translation from 409 to 3900

> LD12965.pep
MEHHEDNAQLDNYLQNRLAESLQICGGAGEHNPHLADATGGNGCAPGIAP
SKSDEVDGEEDEEWKYIHEVRQSEKLQQEKLPLTKETGNGFGPGRDSDNQ
VHGNGAAAVFNLYEEDVEVIKNDGDFSTNSNTTTSTDEVVARQAQEPNQL
PEQLQQQQQIESQGVHEDPRQEDEDEHSSVATTYGTSSLSENNSSPLDQE
EVVMVAQTVGQEQLVDFDNKENSYFVKNLEENHSQLNPNAVAFVPGVGSQ
SSSPLPAAEDPLPGVQPRPFLPGGTLDDLVAESPRKEFARINMDGIAVPD
EREFDIEADMRPHELEQESDTFGAGHLEMQLLNGIGTADQAALRDVLDHG
PETSVDMELPLDQVPNDADIMKQSIYAEHNSSIEDILNSVQPLPIQTCDD
KELIHVEEKEHVSKSPSTEELQFQSDFPNNQESHTLFNNTEQDPMQASFY
LEHTSQKAQEGCQEQMQLPAECSDIFADQSLLLDTSAPQLSSEADSPVAK
LELESQQAGIVDITPSPLSSTAEKHLVEDTKELVEEYTLDPESHFFGVVS
SQAPLQNDEENAVFESVSGYETQNFDEISSPPEGINPFAQPFTPAHLVIE
QANTMMEDVGGMPIPASEDFAICDKVASKSSNEVEDHRSEQQAFVKEELL
HPVGDVVAQVENLGTEKNFVVEEERLPISVSDEIPLSSASKEKLLPDTTD
EQLLTSALEEKLRSVAPEESVSTAADGQSISQFDEYVIASNKPLEDILEP
EKDVEVAKSLSEKTSVATVAGGAVVGATKTHSATKAGSTAASAKSKTETL
VMKKTTASSTSVYGANKSAAPRPSTARLGIKSTSIATKTSTTSSLTGNPR
KSLSSNVGSTVKPPTKLSGTRPATAPVSKVTLGAKTITNKPTASGTASDN
VTRTTLRPLVSTNARRPATSGTGSVASSTARRPVTNAKGSAPGSAASTKV
RPAATMTAPVKPKVLSPRSTISSTTTVRKVPSTSTPSFSTRSPNKQQSNG
LGKNTSSTTTSTATATITKSFTARSAPKFTHSASLTYNNGSTSRRLLVPG
SSSTTTTSSLRKSSPLKAAPGKAASKPLTPQSKDGTAKSSPAVLKARNST
LMGGEGVAPSNECVPTPNGQINAEEVVKLKGKGLAEEVKIIEEQKLHEQD
VPAHNAEVPLLDF*

LD12965.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:51:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17495-PA 1222 GF17495-PA 1..1222 1..1163 1571 40.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:51:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11842-PA 1150 GG11842-PA 1..1150 1..1163 4153 77.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:32
Subject Length Description Subject Range Query Range Score Percent Strand
Map205-PA 1163 CG1483-PA 1..1163 1..1163 5888 100 Plus
Map205-PB 1185 CG1483-PB 1..1185 1..1163 5855 98.1 Plus
Map205-PC 1109 CG1483-PC 1..1109 1..1163 5544 95.3 Plus
Muc68D-PB 1514 CG6004-PB 150..1138 111..1089 265 20 Plus
Sgs1-PA 1286 CG3047-PA 290..618 777..1106 251 26.5 Plus
Sgs1-PA 1286 CG3047-PA 483..826 764..1106 250 25.9 Plus
Sgs1-PA 1286 CG3047-PA 327..650 777..1106 248 26.3 Plus
Sgs1-PA 1286 CG3047-PA 423..762 777..1106 245 26.3 Plus
CG46026-PA 666 CG46026-PA 232..656 677..1100 244 22.5 Plus
Muc96D-PA 881 CG31439-PA 118..457 763..1100 244 21.1 Plus
Sgs1-PA 1286 CG3047-PA 560..964 685..1100 243 22.8 Plus
Sgs1-PA 1286 CG3047-PA 456..778 778..1106 242 26.9 Plus
Sgs1-PA 1286 CG3047-PA 819..1156 764..1100 242 25.1 Plus
Muc68D-PB 1514 CG6004-PB 62..1037 173..1120 241 19.8 Plus
Sgs1-PA 1286 CG3047-PA 243..580 780..1100 241 26.8 Plus
Sgs1-PA 1286 CG3047-PA 117..516 696..1100 240 24.8 Plus
Sgs1-PA 1286 CG3047-PA 567..890 777..1106 240 26 Plus
Sgs1-PA 1286 CG3047-PA 448..858 685..1106 239 22.8 Plus
Sgs1-PA 1286 CG3047-PA 771..1108 764..1100 239 25.4 Plus
Sgs1-PA 1286 CG3047-PA 391..746 761..1106 237 25.7 Plus
Sgs1-PA 1286 CG3047-PA 375..714 761..1106 236 26.1 Plus
Sgs1-PA 1286 CG3047-PA 535..874 761..1106 236 25.1 Plus
Sgs1-PA 1286 CG3047-PA 339..682 778..1106 235 25.7 Plus
Muc96D-PA 881 CG31439-PA 454..789 764..1100 234 24 Plus
Sgs1-PA 1286 CG3047-PA 723..1084 764..1116 233 25.1 Plus
Mur2B-PB 1144 CG14796-PB 378..805 661..1100 233 24.7 Plus
Mur2B-PC 1795 CG14796-PC 378..805 661..1100 233 24.7 Plus
Mur2B-PA 1795 CG14796-PA 378..805 661..1100 233 24.7 Plus
Mur2B-PB 1144 CG14796-PB 439..907 655..1120 231 23 Plus
Mur2B-PC 1795 CG14796-PC 439..907 655..1120 231 23 Plus
Mur2B-PA 1795 CG14796-PA 439..907 655..1120 231 23 Plus
Sgs1-PA 1286 CG3047-PA 803..1140 764..1100 229 24.3 Plus
Sgs1-PA 1286 CG3047-PA 279..602 777..1106 227 27.8 Plus
Sgs1-PA 1286 CG3047-PA 707..1044 764..1100 227 25.4 Plus
Sgs1-PA 1286 CG3047-PA 691..1028 764..1100 225 25.4 Plus
Sgs1-PA 1286 CG3047-PA 768..1175 685..1088 225 23.4 Plus
Muc96D-PA 881 CG31439-PA 257..597 764..1100 225 20.5 Plus
CG46026-PA 666 CG46026-PA 123..550 675..1090 224 24.4 Plus
Sgs1-PA 1286 CG3047-PA 675..1012 764..1100 223 24.3 Plus
Muc68D-PB 1514 CG6004-PB 309..1255 127..1124 222 19.3 Plus
Sgs1-PA 1286 CG3047-PA 867..1179 764..1070 221 24.9 Plus
Sgs1-PA 1286 CG3047-PA 359..698 777..1106 220 26.3 Plus
Muc96D-PA 881 CG31439-PA 377..728 764..1116 220 20.4 Plus
Muc4B-PC 496 CG32774-PC 45..388 723..1059 220 23 Plus
Muc4B-PB 496 CG32774-PB 45..388 723..1059 220 23 Plus
Muc96D-PA 881 CG31439-PA 209..502 764..1059 219 22.1 Plus
CG46026-PA 666 CG46026-PA 165..592 679..1116 218 22.9 Plus
Muc96D-PA 881 CG31439-PA 293..640 764..1100 218 20.4 Plus
Muc96D-PA 881 CG31439-PA 180..472 764..1059 217 21.6 Plus
Muc96D-PA 881 CG31439-PA 392..744 764..1116 215 19.3 Plus
CG46026-PA 666 CG46026-PA 296..662 679..1090 214 24.2 Plus
Muc96D-PA 881 CG31439-PA 154..493 764..1116 213 20.1 Plus
Mur2B-PB 1144 CG14796-PB 616..938 758..1101 213 24.7 Plus
Mur2B-PC 1795 CG14796-PC 616..938 758..1101 213 24.7 Plus
Mur2B-PA 1795 CG14796-PA 616..938 758..1101 213 24.7 Plus
Muc96D-PA 881 CG31439-PA 350..686 764..1100 212 19.6 Plus
Muc96D-PA 881 CG31439-PA 101..438 776..1116 210 20.5 Plus
Muc96D-PA 881 CG31439-PA 324..641 750..1059 210 21.4 Plus
Muc96D-PA 881 CG31439-PA 234..529 764..1059 209 20.9 Plus
Muc96D-PA 881 CG31439-PA 155..447 761..1059 208 21.4 Plus
Muc96D-PA 881 CG31439-PA 232..563 764..1096 206 20.1 Plus
Muc4B-PC 496 CG32774-PC 29..366 744..1075 206 24.4 Plus
Muc4B-PB 496 CG32774-PB 29..366 744..1075 206 24.4 Plus
Muc96D-PA 881 CG31439-PA 367..700 764..1100 204 20.2 Plus
Mur2B-PB 1144 CG14796-PB 615..1039 696..1118 202 23.5 Plus
Mur2B-PC 1795 CG14796-PC 615..1039 696..1118 202 23.5 Plus
Mur2B-PA 1795 CG14796-PA 615..1039 696..1118 202 23.5 Plus
Np-PB 1041 CG34350-PB 319..647 750..1090 199 26.1 Plus
Np-PA 1041 CG34350-PA 319..647 750..1090 199 26.1 Plus
Muc30E-PC 1702 CG33300-PC 516..861 759..1100 199 23.7 Plus
Muc30E-PC 1702 CG33300-PC 1143..1474 778..1091 199 24.8 Plus
Mur2B-PB 1144 CG14796-PB 643..1049 683..1079 198 20.8 Plus
Muc96D-PA 881 CG31439-PA 411..767 764..1110 197 19.6 Plus
CG46026-PA 666 CG46026-PA 146..512 778..1100 195 24.1 Plus
Mur2B-PB 1144 CG14796-PB 764..1102 699..1058 195 23.3 Plus
Mur2B-PC 1795 CG14796-PC 764..1106 699..1043 194 23.1 Plus
Mur2B-PA 1795 CG14796-PA 764..1106 699..1043 194 23.1 Plus
tn-PC 1517 CG15105-PC 533..1024 557..1101 194 22.9 Plus
Muc68Ca-PA 3135 CG18331-PA 1505..1934 714..1119 194 24 Plus
Muc68Ca-PA 3135 CG18331-PA 785..1214 714..1119 193 23.9 Plus
Muc30E-PC 1702 CG33300-PC 707..1051 761..1090 191 24.3 Plus
Muc68Ca-PA 3135 CG18331-PA 1431..1854 720..1119 191 23.9 Plus
Muc96D-PA 881 CG31439-PA 432..772 764..1090 190 21.1 Plus
Muc68Ca-PA 3135 CG18331-PA 1585..2014 714..1119 190 23.8 Plus
Mur11Da-PD 626 CG32644-PD 181..535 750..1085 190 23.4 Plus
GlyT-PB 1188 CG5549-PB 647..1083 665..1117 188 23.6 Plus
Muc30E-PC 1702 CG33300-PC 1003..1331 778..1090 187 24.9 Plus
CG46026-PA 666 CG46026-PA 120..417 778..1100 186 24 Plus
Muc68Ca-PA 3135 CG18331-PA 927..1294 754..1119 186 23 Plus
CG34220-PA 726 CG34220-PA 65..420 778..1115 186 20.2 Plus
Muc30E-PC 1702 CG33300-PC 112..453 780..1092 185 26.3 Plus
Mur2B-PC 1795 CG14796-PC 643..1079 683..1100 184 21.2 Plus
Mur2B-PA 1795 CG14796-PA 643..1079 683..1100 184 21.2 Plus
Muc4B-PC 496 CG32774-PC 29..324 756..1091 183 24.1 Plus
Muc4B-PB 496 CG32774-PB 29..324 756..1091 183 24.1 Plus
Muc30E-PC 1702 CG33300-PC 764..1121 748..1090 183 23.2 Plus
Muc68Ca-PA 3135 CG18331-PA 1013..1374 765..1119 182 22.8 Plus
Mur29B-PA 555 CG31901-PA 87..464 679..1059 182 22.5 Plus
CG4835-PB 1224 CG4835-PB 804..1155 717..1059 182 23.5 Plus
Muc12Ea-PA 3269 CG32602-PA 1813..2175 742..1117 182 25.2 Plus
CG46026-PA 666 CG46026-PA 117..388 850..1116 181 25.2 Plus
CG32834-PB 556 CG32834-PB 253..537 777..1094 181 28.5 Plus
Np-PB 1041 CG34350-PB 295..620 797..1114 180 26 Plus
Np-PA 1041 CG34350-PA 295..620 797..1114 180 26 Plus
Mur11Da-PD 626 CG32644-PD 221..537 767..1121 180 24.2 Plus
Muc30E-PC 1702 CG33300-PC 474..965 630..1095 179 20.7 Plus
Muc30E-PC 1702 CG33300-PC 938..1252 778..1079 179 24.6 Plus
Muc12Ea-PA 3269 CG32602-PA 1043..1419 753..1117 179 25.1 Plus
Muc96D-PA 881 CG31439-PA 523..826 764..1063 178 22 Plus
Muc30E-PC 1702 CG33300-PC 191..542 759..1095 178 22.4 Plus
Muc30E-PC 1702 CG33300-PC 340..650 778..1082 178 23.9 Plus
Muc30E-PC 1702 CG33300-PC 386..726 759..1100 178 23.5 Plus
Muc30E-PC 1702 CG33300-PC 1226..1585 758..1090 178 22.1 Plus
Muc30E-PC 1702 CG33300-PC 600..926 778..1100 177 24.1 Plus
Muc30E-PC 1702 CG33300-PC 734..1191 630..1090 177 21.5 Plus
Mur29B-PA 555 CG31901-PA 126..450 759..1090 177 25.4 Plus
CG43332-PA 628 CG43332-PA 222..556 696..1031 177 25.1 Plus
Muc30E-PC 1702 CG33300-PC 1213..1599 778..1125 173 23.8 Plus
Muc68Ca-PA 3135 CG18331-PA 1078..1454 758..1119 173 23.5 Plus
Muc68Ca-PA 3135 CG18331-PA 367..734 754..1119 172 22 Plus
CG46026-PA 666 CG46026-PA 342..664 698..1027 171 20.3 Plus
Muc30E-PC 1702 CG33300-PC 669..1016 759..1095 171 22.2 Plus
Muc30E-PC 1702 CG33300-PC 953..1296 764..1095 171 23.3 Plus
Muc68Ca-PA 3135 CG18331-PA 93..494 726..1119 171 21.6 Plus
Muc68Ca-PA 3135 CG18331-PA 207..574 754..1119 171 22.2 Plus
Nup153-PC 1883 CG4453-PC 1301..1683 719..1077 171 27 Plus
Nup153-PA 1883 CG4453-PA 1301..1683 719..1077 171 27 Plus
Nup153-PD 1929 CG4453-PD 1301..1683 719..1077 171 27 Plus
Smr-PF 3601 CG4013-PF 1130..1438 755..1100 171 25.8 Plus
Smr-PE 3601 CG4013-PE 1130..1438 755..1100 171 25.8 Plus
Smr-PD 3601 CG4013-PD 1130..1438 755..1100 171 25.8 Plus
Smr-PG 3607 CG4013-PG 1136..1444 755..1100 171 25.8 Plus
CG46026-PA 666 CG46026-PA 413..666 761..1022 170 24.9 Plus
Muc30E-PC 1702 CG33300-PC 816..1142 758..1095 170 22.2 Plus
Muc68Ca-PA 3135 CG18331-PA 1967..2334 754..1119 170 22.4 Plus
GlyT-PB 1188 CG5549-PB 807..1170 715..1075 170 27.4 Plus
CG34220-PA 726 CG34220-PA 267..657 749..1130 170 20.2 Plus
Mur29B-PA 555 CG31901-PA 96..431 761..1103 170 25.5 Plus
Mur29B-PA 555 CG31901-PA 152..475 687..1022 170 24.2 Plus
Ppn-PC 2174 CG33103-PC 723..1180 680..1116 170 23 Plus
Ppn-PF 2776 CG33103-PF 723..1180 680..1116 170 23 Plus
Ppn-PG 2841 CG33103-PG 723..1180 680..1116 170 23 Plus
Ppn-PE 2898 CG33103-PE 723..1180 680..1116 170 23 Plus
Np-PB 1041 CG34350-PB 125..525 707..1130 168 22.6 Plus
Np-PA 1041 CG34350-PA 125..525 707..1130 168 22.6 Plus
Muc68Ca-PA 3135 CG18331-PA 447..814 754..1119 168 22.2 Plus
Np-PB 1041 CG34350-PB 406..750 757..1069 167 25 Plus
Np-PA 1041 CG34350-PA 406..750 757..1069 167 25 Plus
Muc68Ca-PA 3135 CG18331-PA 1345..1749 714..1116 167 23.5 Plus
Muc12Ea-PA 3269 CG32602-PA 676..1019 742..1100 167 24.7 Plus
Ppn-PC 2174 CG33103-PC 695..1264 542..1115 167 20.5 Plus
Ppn-PF 2776 CG33103-PF 695..1264 542..1115 167 20.5 Plus
Ppn-PG 2841 CG33103-PG 695..1264 542..1115 167 20.5 Plus
Ppn-PE 2898 CG33103-PE 695..1264 542..1115 167 20.5 Plus
CG34417-PM 1826 CG34417-PM 628..935 786..1100 166 24.7 Plus
Mur29B-PA 555 CG31901-PA 66..399 763..1103 165 25.1 Plus
CG34417-PQ 3183 CG34417-PQ 682..981 786..1091 165 24.5 Plus
CG34417-PF 3246 CG34417-PF 682..981 786..1091 165 24.5 Plus
CG34417-PK 3329 CG34417-PK 628..927 786..1091 165 24.5 Plus
CG34417-PV 3382 CG34417-PV 682..981 786..1091 165 24.5 Plus
CG34417-PD 3383 CG34417-PD 682..981 786..1091 165 24.5 Plus
CG34417-PS 3498 CG34417-PS 682..981 786..1091 165 24.5 Plus
CG34417-PI 3541 CG34417-PI 682..981 786..1091 165 24.5 Plus
CG34417-PX 4925 CG34417-PX 628..927 786..1091 165 24.5 Plus
CG34417-PU 4979 CG34417-PU 682..981 786..1091 165 24.5 Plus
CG34417-PJ 4979 CG34417-PJ 682..981 786..1091 165 24.5 Plus
CG34417-PH 4979 CG34417-PH 682..981 786..1091 165 24.5 Plus
CG34417-PR 5128 CG34417-PR 682..981 786..1091 165 24.5 Plus
CG34417-PT 5182 CG34417-PT 682..981 786..1091 165 24.5 Plus
Muc68Ca-PA 3135 CG18331-PA 584..1029 722..1116 164 22.4 Plus
Mur11Da-PD 626 CG32644-PD 196..519 679..1038 164 21.9 Plus
Muc12Ea-PA 3269 CG32602-PA 1258..1598 757..1108 163 25.1 Plus
CG42525-PA 419 CG42525-PA 68..353 744..1059 163 26.3 Plus
Mur11Da-PD 626 CG32644-PD 194..474 779..1101 162 22.5 Plus
CG43332-PA 628 CG43332-PA 265..526 832..1090 161 24.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:52:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22793-PA 580 GI22793-PA 154..550 120..532 680 50.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:52:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24098-PA 700 GL24098-PA 3..612 4..557 1168 52.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:52:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA30152-PA 1289 GA30152-PA 126..672 112..600 1221 55.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:52:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16406-PA 689 GM16406-PA 1..651 1..651 2973 91.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:52:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16184-PA 1151 GD16184-PA 1..1151 1..1163 4920 88.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:52:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22795-PA 592 GJ22795-PA 3..581 4..545 719 42.5 Plus
Dvir\GJ22796-PA 807 GJ22796-PA 572..721 960..1093 188 45.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:52:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10932-PA 1188 GK10932-PA 188..526 178..532 718 52.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:52:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23288-PA 1209 GE23288-PA 1..1209 1..1163 4113 74 Plus

LD12965.hyp Sequence

Translation from 409 to 3900

> LD12965.hyp
MEHHEDNAQLDNYLQNRLAESLQICGGAGEHNPHLADATGGNGCAPGIAP
SKSDEVDGEEDEEWKYIHEVRQSEKLQQEKLPLTKETGNGFGPGRDSDNQ
VHGNGAAAVFNLYEEDVEVIKNDGDFSTNSNTTTSTDEVVARQAQEPNQL
PEQLQQQQQIESQGVHEDPRQEDEDEHSSVATTYGTSSLSENNSSPLDQE
EVVMVAQTVGQEQLVDFDNKENSYFVKNLEENHSQLNPNAVAFVPGVGSQ
SSSPLPAAEDPLPGVQPRPFLPGGTLDDLVAESPRKEFARINMDGIAVPD
EREFDIEADMRPHELEQESDTFGAGHLEMQLLNGIGTADQAALRDVLDHG
PETSVDMELPLDQVPNDADIMKQSIYAEHNSSIEDILNSVQPLPIQTCDD
KELIHVEEKEHVSKSPSTEELQFQSDFPNNQESHTLFNNTEQDPMQASFY
LEHTSQKAQEGCQEQMQLPAECSDIFADQSLLLDTSAPQLSSEADSPVAK
LELESQQAGIVDITPSPLSSTAEKHLVEDTKELVEEYTLDPESHFFGVVS
SQAPLQNDEENAVFESVSGYETQNFDEISSPPEGINPFAQPFTPAHLVIE
QANTMMEDVGGMPIPASEDFAICDKVASKSSNEVEDHRSEQQAFVKEELL
HPVGDVVAQVENLGTEKNFVVEEERLPISVSDEIPLSSASKEKLLPDTTD
EQLLTSALEEKLRSVAPEESVSTAADGQSISQFDEYVIASNKPLEDILEP
EKDVEVAKSLSEKTSVATVAGGAVVGATKTHSATKAGSTAASAKSKTETL
VMKKTTASSTSVYGANKSAAPRPSTARLGIKSTSIATKTSTTSSLTGNPR
KSLSSNVGSTVKPPTKLSGTRPATAPVSKVTLGAKTITNKPTASGTASDN
VTRTTLRPLVSTNARRPATSGTGSVASSTARRPVTNAKGSAPGSAASTKV
RPAATMTAPVKPKVLSPRSTISSTTTVRKVPSTSTPSFSTRSPNKQQSNG
LGKNTSSTTTSTATATITKSFTARSAPKFTHSASLTYNNGSTSRRLLVPG
SSSTTTTSSLRKSSPLKAAPGKAASKPLTPQSKDGTAKSSPAVLKARNST
LMGGEGVAPSNECVPTPNGQINAEEVVKLKGKGLAEEVKIIEEQKLHEQD
VPAHNAEVPLLDF*

LD12965.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:15:16
Subject Length Description Subject Range Query Range Score Percent Strand
Map205-PA 1163 CG1483-PA 1..1163 1..1163 5888 100 Plus
Map205-PB 1185 CG1483-PB 1..1185 1..1163 5855 98.1 Plus
Map205-PC 1109 CG1483-PC 1..1109 1..1163 5544 95.3 Plus
Muc68D-PB 1514 CG6004-PB 150..1138 111..1089 265 20 Plus
Sgs1-PA 1286 CG3047-PA 290..618 777..1106 251 26.5 Plus
Muc68D-PB 1514 CG6004-PB 62..1037 173..1120 241 19.8 Plus
Muc68D-PB 1514 CG6004-PB 309..1255 127..1124 222 19.3 Plus