Clone LD13401 Report

Search the DGRC for LD13401

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:134
Well:1
Vector:pBS SK-
Associated Gene/TranscriptFmr1-RC
Protein status:LD13401.pep: gold
Sequenced Size:2963

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Fmr1 2008-04-29 Release 5.5 accounting
Fmr1 2008-04-29 Picked prior to 5.5
Fmr1 2008-08-15 Release 5.9 accounting
Fmr1 2008-12-18 5.12 accounting

Clone Sequence Records

LD13401.complete Sequence

2963 bp assembled on 2007-10-25

GenBank Submission: BT031124

> LD13401.complete
GCAGCGCAGCCGAAAAAAATTGAAGCAGCACTGCACGCGATATATTTTGT
ATTTTCAAAGGTTAAAGCCGCATTCACAGGCATCCGCCGAGGGCAAACGA
AGTGCAAAAGTGCCGGCCAGCAGCAACATTTGAAGCAGCAGCCGCCAAGC
AAAAGACTGATTTGAGTACAAGGAACTAGAAGCAGGAACGCGAGGTTTCT
GCCACTGCACACTGAATTGAGCCCCAGATAACGCGGCAAACTGCAGTCGA
CGGGGAAAAGTCGGGAGTTGAAGGCTGGGCAGCATCAGCATCAGCAGCAG
GAGGGACAGGGACGGACGGCGAAGAACCACCAGAACCAGAACCAAAACAA
AGCGGATAAACCAGGAGGCACTACGTCTGGCGATATGGAAGATCTCCTCG
TGGAAGTTCGGCTCGACAATGGCGCCTACTACAAGGGCCAGGTGACAGCT
GTCGCCGATGATGGCATCTTTGTGGATGTGGACGGCGTGCCCGAGAGTAT
GAAATATCCATTTGTGAACGTTCGCCTGCCGCCCGAGGAAACCGTTGAGG
TGGCCGCACCGATCTTCGAGGAGGGCATGGAAGTGGAGGTGTTCACGCGC
ACGAACGATCGGGAAACCTGCGGCTGGTGGGTGGGCATTATTAAAATGCG
CAAAGCGGAAATCTATGCGGTCGCGTACATCGGTTTTGAGACGTCCTACA
CCGAAATCTGTGAATTGGGTCGTCTGCGCGCCAAAAACTCGAATCCGCCA
ATTACAGCCAAGACCTTCTACCAGTTCACGCTGCCCGTGCCCGAGGAGTT
GCGCGAAGAAGCCCAGAAGGATGGTATACACAAGGAGTTTCAGCGCACAA
TCGATGCCGGCGTGTGCAACTACAGTCGCGATCTGGACGCCCTGATTGTC
ATCTCCAAGTTTGAGCACACTCAGAAGCGAGCCAGTATGCTCAAGGATAT
GCATTTTCGTAATCTCTCACAAAAGGTTATGCTGTTGAAAAGGACTGAAG
AAGCTGCCCGTCAGCTCGAAACAACTAAACTGATGAGCCGTGGAAACTAC
GTTGAGGAGTTCCGTGTGCGTGACGATCTCATGGGTTTGGCGATTGGCTC
GCATGGCTCGAATATTCAAGCGGCACGCACTGTGGACGGCGTCACCAACA
TCGAGCTGGAGGAGAAGTCCTGCACATTCAAAATCAGCGGAGAGACCGAG
GAGTCTGTGCAGCGTGCCCGCGCGATGCTCGAATACGCCGAGGAGTTCTT
CCAGGTGCCCAGGGAGTTGGTGGGCAAGGTGATTGGCAAGAATGGGCGCA
TTATCCAGGAGATTGTGGACAAGAGTGGCGTGTTTCGAATCAAGATCGCT
GGCGACGATGAACAGGATCAGAACATACCACGTGAGCTGGCGCATGTACC
CTTTGTGTTCATTGGCACCGTGGAGAGCATTGCAAATGCCAAAGTGCTGT
TGGAGTATCATCTGTCGCACCTGAAGGAAGTAGAACAGTTGCGTCAGGAG
AAGATGGAGATTGATCAGCAGCTTCGCGCCATCCAGGAATCCTCCATGGG
CTCCACACAGAGCTTCCCAGTGACGCGGCGCTCTGAGCGCGGCTACAGCA
GTGACATTGAGTCGGTGCGCTCTATGCGCGGCGGTGGTGGCGGCCAGCGT
GGTCGTGTACGCGGACGTGGTGGTGGCGGTCCTGGAGGTGGCAATGGCCT
GAACCAGCGCTACCACAACAATCGCCGCGACGAGGATGACTACAACTCGC
GGGGCGATCATCAGCGTGACCAGCAGCGTGGCTACAACGATCGCGGCGGT
GGTGACAACACTGGCAGCTATCGTGGAGGCGGTGGTGGCGCCGGTGGTCC
TGGCAACAACAGGCGCGGCGGAATCAACCGCCGGCCGCCACGCAACGATC
AGCAGAATGGCAGGGACTATCAGCACCACAACCACACCACCGAAGAGGTG
CGGGAGACCCGTGAAATGAGCAGCGTGGAGAGAGCGGACAGTAACTCATC
GTACGAAGGTAGCTCGCGGAGGCGCAGAAGGCAGAAGAACAACAATGGAC
CCAGTAACACAAACGGAGCTGTTGCCAATAACAACAACAAACCTCAGTCG
GCGCAGCAGCCACAACAGCAGCAGCCGCCGGCGCCTGGGAATAAGGCGGC
ACTAAATGCCGGAGATGCCAGCAAACAGAACAGCGGCAATGCGAACGCCG
CTGGCGGTGCGAGCAAGCCGAAGGATGCCTCACGCAACGGCGACAAGCAG
CAGGCGGGCACACAGCAGCAACAGCCATCGCAGGTACAACAGCAGCAGGC
GGCACAGCAGCAGCAGCCGAAACCGCGACGCAACAAGAATCGCAGCAACA
ACCACACGGACCAGCCATCCGGACAGCAGCAGCTGGCGGAGAATGTCAAA
AAGGAGGGCCTGGTCAATGGCACGTCCTAAGCCGAGTGGCCAAAGCGGTA
GGAGGAGCAACAGCTCACAGATGGCTAGAACAACATGAACACGAATTGCA
CATCGTTCGACGGAGTAACAATGTTGTATGCGCAGCGGGGCAGTTTAATA
ATCATGTTGATGTCCTTGAATGTAGCCGCCACATAACACAACAACCAACA
ACAACCACACAACACAACACAACTCAACAACAAACAAAACATCCGATCAA
CATCAGACACTAGAACAACATCATCAGCCAACAACAAGCTCCACTAACCA
ATTGTTTGAGAAACTATAAGAGTAACTAAAAAAATAGGAATCGAAAAATT
ATATACATGAAATATGTAACAAATGTGAAAGCATATACTAACACACACAC
ACACTCACACAAGGATACACTCACACACAACCACACACACAATACAGTTC
GAATTATACACAAAAAGGAGGAAGTAATAAAAGAAAATTCATGCCTAGGC
TTATAATTTGAATTGAAACTAAAAAAGCTTCAATAACAAAAAAAAAAAAA
AAAAAAAAAAAAA

LD13401.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:34:34
Subject Length Description Subject Range Query Range Score Percent Strand
Fmr1-RC 4564 Fmr1-RC 302..3240 1..2939 14695 100 Plus
Fmr1-RD 4336 Fmr1-RD 196..3012 123..2939 14085 100 Plus
Fmr1-RA 4544 Fmr1-RA 1626..3220 1345..2939 7975 100 Plus
Fmr1-RA 4544 Fmr1-RA 273..1616 1..1344 6720 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:30:34
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5928497..5929374 2937..2060 4390 100 Minus
chr3R 27901430 chr3R 5930061..5930570 1984..1475 2550 100 Minus
chr3R 27901430 chr3R 5931562..5931886 809..485 1625 100 Minus
chr3R 27901430 chr3R 5930841..5931142 1344..1043 1510 100 Minus
chr3R 27901430 chr3R 5934466..5934683 436..219 1090 100 Minus
chr3R 27901430 chr3R 5931329..5931496 977..810 840 100 Minus
chr3R 27901430 chr3R 5930650..5930784 1477..1343 675 100 Minus
chr3R 27901430 chr3R 5935587..5935709 123..1 615 100 Minus
chr3R 27901430 chr3R 5934747..5934843 219..123 485 100 Minus
chr3R 27901430 chr3R 5929445..5929521 2059..1983 385 100 Minus
chr3R 27901430 chr3R 5931206..5931277 1043..972 360 100 Minus
chr3R 27901430 chr3R 5933202..5933253 485..434 260 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:00:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:30:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10102723..10103602 2939..2060 4400 100 Minus
3R 32079331 3R 10104289..10104798 1984..1475 2550 100 Minus
3R 32079331 3R 10105790..10106114 809..485 1625 100 Minus
3R 32079331 3R 10105069..10105370 1344..1043 1510 100 Minus
3R 32079331 3R 10108694..10108911 436..219 1090 100 Minus
3R 32079331 3R 10105557..10105724 977..810 840 100 Minus
3R 32079331 3R 10104878..10105012 1477..1343 675 100 Minus
3R 32079331 3R 10109815..10109937 123..1 615 100 Minus
3R 32079331 3R 10108975..10109071 219..123 485 100 Minus
3R 32079331 3R 10103673..10103749 2059..1983 385 100 Minus
3R 32079331 3R 10105434..10105505 1043..972 360 100 Minus
3R 32079331 3R 10107430..10107481 485..434 260 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:31:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 9843554..9844433 2939..2060 4400 100 Minus
3R 31820162 3R 9845120..9845629 1984..1475 2550 100 Minus
3R 31820162 3R 9846621..9846945 809..485 1625 100 Minus
3R 31820162 3R 9845900..9846201 1344..1043 1510 100 Minus
3R 31820162 3R 9849525..9849742 436..219 1090 100 Minus
3R 31820162 3R 9846388..9846555 977..810 840 100 Minus
3R 31820162 3R 9845709..9845843 1477..1343 675 100 Minus
3R 31820162 3R 9850646..9850768 123..1 615 100 Minus
3R 31820162 3R 9849806..9849902 219..123 485 100 Minus
3R 31820162 3R 9844504..9844580 2059..1983 385 100 Minus
3R 31820162 3R 9846265..9846336 1043..972 360 100 Minus
3R 31820162 3R 9848261..9848312 485..434 260 100 Minus
Blast to na_te.dros performed 2019-03-15 17:30:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6878 2235..2383 241 69.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2443 2239..2384 225 67.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6929 2172..2389 219 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6737..7010 2076..2364 218 58.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2596..2914 2053..2378 213 57.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6755..7055 2025..2334 212 56.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6653..6856 2186..2385 208 63.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2642 2052..2385 181 55.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2616..2950 2147..2491 177 57.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6726..7070 2038..2395 167 55.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6767..6941 2169..2341 165 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2418 2257..2383 164 65.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..2856 2103..2685 164 55.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2303..2527 2072..2297 162 55.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2268..2653 1964..2356 130 51.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1517..1588 2051..2126 126 68.4 Plus
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 4490..4624 2064..2199 119 55.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1560..1597 118..155 118 78.9 Plus
roo 9092 roo DM_ROO 9092bp 1101..1145 2090..2134 117 73.3 Plus

LD13401.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:31:38 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5930651..5930782 1345..1476 100 <- Minus
chr3R 5928497..5928592 2842..2937 100 == Minus
chr3R 5928644..5929081 2353..2790 88 == Minus
chr3R 5929172..5929374 2060..2262 100 <- Minus
chr3R 5929445..5929519 1985..2059 100 <- Minus
chr3R 5930061..5930568 1477..1984 100 <- Minus
chr3R 5930841..5931141 1044..1344 100 <- Minus
chr3R 5931206..5931273 976..1043 100 <- Minus
chr3R 5931331..5931496 810..975 100 <- Minus
chr3R 5931562..5931885 486..809 100 <- Minus
chr3R 5933202..5933245 442..485 100 <- Minus
chr3R 5934463..5934683 219..441 98 <- Minus
chr3R 5934748..5934843 123..218 100 <- Minus
chr3R 5935588..5935709 1..122 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:47:34 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
Fmr1-RC 1..2046 385..2430 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:04:02 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
Fmr1-RC 1..2046 385..2430 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:38:13 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
Fmr1-RG 1..2190 241..2430 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:49:40 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
Fmr1-RC 1..2046 385..2430 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:39:27 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
Fmr1-RG 1..2190 241..2430 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:55:11 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
Fmr1-RC 185..3121 1..2937 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:04:02 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
Fmr1-RC 185..3121 1..2937 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:38:13 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
Fmr1-RC 185..3121 1..2937 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:49:41 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
Fmr1-RC 185..3121 1..2937 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:39:27 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
Fmr1-RC 185..3121 1..2937 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:31:38 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10105559..10105724 810..975 100 <- Minus
3R 10105069..10105369 1044..1344 100 <- Minus
3R 10105434..10105501 976..1043 100 <- Minus
3R 10102725..10103602 2060..2937 100 <- Minus
3R 10103673..10103747 1985..2059 100 <- Minus
3R 10104289..10104796 1477..1984 100 <- Minus
3R 10104879..10105010 1345..1476 100 <- Minus
3R 10105790..10106113 486..809 100 <- Minus
3R 10107430..10107479 436..485 100 <- Minus
3R 10108695..10108911 219..435 100 <- Minus
3R 10108976..10109071 123..218 100 <- Minus
3R 10109816..10109937 1..122 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:31:38 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10105559..10105724 810..975 100 <- Minus
3R 10105069..10105369 1044..1344 100 <- Minus
3R 10105434..10105501 976..1043 100 <- Minus
3R 10102725..10103602 2060..2937 100 <- Minus
3R 10103673..10103747 1985..2059 100 <- Minus
3R 10104289..10104796 1477..1984 100 <- Minus
3R 10104879..10105010 1345..1476 100 <- Minus
3R 10105790..10106113 486..809 100 <- Minus
3R 10107430..10107479 436..485 100 <- Minus
3R 10108695..10108911 219..435 100 <- Minus
3R 10108976..10109071 123..218 100 <- Minus
3R 10109816..10109937 1..122 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:31:38 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10105559..10105724 810..975 100 <- Minus
3R 10105069..10105369 1044..1344 100 <- Minus
3R 10105434..10105501 976..1043 100 <- Minus
3R 10102725..10103602 2060..2937 100 <- Minus
3R 10103673..10103747 1985..2059 100 <- Minus
3R 10104289..10104796 1477..1984 100 <- Minus
3R 10104879..10105010 1345..1476 100 <- Minus
3R 10105790..10106113 486..809 100 <- Minus
3R 10107430..10107479 436..485 100 <- Minus
3R 10108695..10108911 219..435 100 <- Minus
3R 10108976..10109071 123..218 100 <- Minus
3R 10109816..10109937 1..122 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:38:13 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5928447..5929324 2060..2937 100 <- Minus
arm_3R 5929395..5929469 1985..2059 100 <- Minus
arm_3R 5930011..5930518 1477..1984 100 <- Minus
arm_3R 5930601..5930732 1345..1476 100 <- Minus
arm_3R 5930791..5931091 1044..1344 100 <- Minus
arm_3R 5931156..5931223 976..1043 100 <- Minus
arm_3R 5931281..5931446 810..975 100 <- Minus
arm_3R 5931512..5931835 486..809 100 <- Minus
arm_3R 5933152..5933201 436..485 100 <- Minus
arm_3R 5934417..5934633 219..435 100 <- Minus
arm_3R 5934698..5934793 123..218 100 <- Minus
arm_3R 5935538..5935659 1..122 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:56:06 Download gff for LD13401.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9843556..9844433 2060..2937 100 <- Minus
3R 9844504..9844578 1985..2059 100 <- Minus
3R 9845120..9845627 1477..1984 100 <- Minus
3R 9845710..9845841 1345..1476 100 <- Minus
3R 9845900..9846200 1044..1344 100 <- Minus
3R 9846265..9846332 976..1043 100 <- Minus
3R 9846390..9846555 810..975 100 <- Minus
3R 9846621..9846944 486..809 100 <- Minus
3R 9848261..9848310 436..485 100 <- Minus
3R 9849526..9849742 219..435 100 <- Minus
3R 9849807..9849902 123..218 100 <- Minus
3R 9850647..9850768 1..122 100   Minus

LD13401.pep Sequence

Translation from 384 to 2429

> LD13401.pep
MEDLLVEVRLDNGAYYKGQVTAVADDGIFVDVDGVPESMKYPFVNVRLPP
EETVEVAAPIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIG
FETSYTEICELGRLRAKNSNPPITAKTFYQFTLPVPEELREEAQKDGIHK
EFQRTIDAGVCNYSRDLDALIVISKFEHTQKRASMLKDMHFRNLSQKVML
LKRTEEAARQLETTKLMSRGNYVEEFRVRDDLMGLAIGSHGSNIQAARTV
DGVTNIELEEKSCTFKISGETEESVQRARAMLEYAEEFFQVPRELVGKVI
GKNGRIIQEIVDKSGVFRIKIAGDDEQDQNIPRELAHVPFVFIGTVESIA
NAKVLLEYHLSHLKEVEQLRQEKMEIDQQLRAIQESSMGSTQSFPVTRRS
ERGYSSDIESVRSMRGGGGGQRGRVRGRGGGGPGGGNGLNQRYHNNRRDE
DDYNSRGDHQRDQQRGYNDRGGGDNTGSYRGGGGGAGGPGNNRRGGINRR
PPRNDQQNGRDYQHHNHTTEEVRETREMSSVERADSNSSYEGSSRRRRRQ
KNNNGPSNTNGAVANNNNKPQSAQQPQQQQPPAPGNKAALNAGDASKQNS
GNANAAGGASKPKDASRNGDKQQAGTQQQQPSQVQQQQAAQQQQPKPRRN
KNRSNNHTDQPSGQQQLAENVKKEGLVNGTS*

LD13401.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:39:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17134-PA 858 GF17134-PA 155..858 1..681 2697 85.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:39:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17303-PA 677 GG17303-PA 1..677 1..681 2858 89.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:39:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14068-PA 722 GH14068-PA 1..641 1..622 2368 77 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:11
Subject Length Description Subject Range Query Range Score Percent Strand
Fmr1-PG 729 CG6203-PG 49..729 1..681 3541 100 Plus
Fmr1-PK 681 CG6203-PK 1..681 1..681 3541 100 Plus
Fmr1-PJ 681 CG6203-PJ 1..681 1..681 3541 100 Plus
Fmr1-PC 681 CG6203-PC 1..681 1..681 3541 100 Plus
Fmr1-PD 681 CG6203-PD 1..681 1..681 3541 100 Plus
Fmr1-PA 684 CG6203-PA 1..684 1..681 3527 99.6 Plus
Fmr1-PE 643 CG6203-PE 1..643 39..681 3348 100 Plus
Fmr1-PF 646 CG6203-PF 1..646 39..681 3334 99.5 Plus
Fmr1-PI 639 CG6203-PI 1..639 39..681 3301 98.9 Plus
Fmr1-PH 577 CG6203-PH 49..577 1..537 2721 98.3 Plus
Fmr1-PB 529 CG6203-PB 1..529 1..537 2721 98.3 Plus
f-PD 1436 CG5424-PD 174..592 311..677 190 22.5 Plus
f-PB 1436 CG5424-PB 174..592 311..677 190 22.5 Plus
f-PC 1509 CG5424-PC 247..665 311..677 190 22.5 Plus
f-PI 1544 CG42864-PI 282..700 311..677 190 22.5 Plus
f-PJ 1761 CG42864-PJ 503..921 311..677 190 22.5 Plus
f-PH 1790 CG42864-PH 528..946 311..677 190 22.5 Plus
f-PF 1918 CG5424-PF 660..1078 311..677 190 22.5 Plus
Smr-PF 3601 CG4013-PF 318..665 348..663 163 22.7 Plus
Smr-PE 3601 CG4013-PE 318..665 348..663 163 22.7 Plus
Smr-PD 3601 CG4013-PD 318..665 348..663 163 22.7 Plus
Smr-PG 3607 CG4013-PG 324..671 348..663 163 22.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:39:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24444-PA 699 GI24444-PA 1..699 1..681 2480 75.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:39:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27278-PA 679 GL27278-PA 1..679 1..681 2596 80.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:39:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19437-PA 699 GA19437-PA 1..699 1..681 2711 82.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:39:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26187-PA 682 GM26187-PA 1..682 1..681 3538 97.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:39:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20735-PA 682 GD20735-PA 1..682 1..681 3545 97.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:39:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10720-PA 683 GJ10720-PA 1..683 1..681 2463 77.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:39:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12202-PA 715 GK12202-PA 1..715 1..681 2384 77.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:39:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24705-PA 688 GE24705-PA 1..688 1..681 3489 96.4 Plus

LD13401.hyp Sequence

Translation from 384 to 2429

> LD13401.hyp
MEDLLVEVRLDNGAYYKGQVTAVADDGIFVDVDGVPESMKYPFVNVRLPP
EETVEVAAPIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIG
FETSYTEICELGRLRAKNSNPPITAKTFYQFTLPVPEELREEAQKDGIHK
EFQRTIDAGVCNYSRDLDALIVISKFEHTQKRASMLKDMHFRNLSQKVML
LKRTEEAARQLETTKLMSRGNYVEEFRVRDDLMGLAIGSHGSNIQAARTV
DGVTNIELEEKSCTFKISGETEESVQRARAMLEYAEEFFQVPRELVGKVI
GKNGRIIQEIVDKSGVFRIKIAGDDEQDQNIPRELAHVPFVFIGTVESIA
NAKVLLEYHLSHLKEVEQLRQEKMEIDQQLRAIQESSMGSTQSFPVTRRS
ERGYSSDIESVRSMRGGGGGQRGRVRGRGGGGPGGGNGLNQRYHNNRRDE
DDYNSRGDHQRDQQRGYNDRGGGDNTGSYRGGGGGAGGPGNNRRGGINRR
PPRNDQQNGRDYQHHNHTTEEVRETREMSSVERADSNSSYEGSSRRRRRQ
KNNNGPSNTNGAVANNNNKPQSAQQPQQQQPPAPGNKAALNAGDASKQNS
GNANAAGGASKPKDASRNGDKQQAGTQQQQPSQVQQQQAAQQQQPKPRRN
KNRSNNHTDQPSGQQQLAENVKKEGLVNGTS*

LD13401.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
Fmr1-PG 729 CG6203-PG 49..729 1..681 3541 100 Plus
Fmr1-PK 681 CG6203-PK 1..681 1..681 3541 100 Plus
Fmr1-PJ 681 CG6203-PJ 1..681 1..681 3541 100 Plus
Fmr1-PC 681 CG6203-PC 1..681 1..681 3541 100 Plus
Fmr1-PD 681 CG6203-PD 1..681 1..681 3541 100 Plus