BDGP Sequence Production Resources |
Search the DGRC for LD13436
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 134 |
Well: | 36 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG12042-RA |
Protein status: | LD13436.pep: gold |
Preliminary Size: | 1906 |
Sequenced Size: | 1800 |
Gene | Date | Evidence |
---|---|---|
CG12042 | 2001-01-01 | Release 2 assignment |
CG12042 | 2001-11-09 | Blastp of sequenced clone |
CG12042 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12042 | 2008-04-29 | Release 5.5 accounting |
CG12042 | 2008-08-15 | Release 5.9 accounting |
CG12042 | 2008-12-18 | 5.12 accounting |
1800 bp (1800 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069420
> LD13436.complete ATATAACAGCTGTCGTCATTACTGCAAGAAGAGGACAAATTTGCAAATTT ACTAAGAAACCAGGAGAAAACTAGCGTCGTCAAGATGAGCTTCATGCAAC CGAGTCCCGTTAAGTACGCGTGCTCCTGCGGCATACTGAACCCGATCAAC ACGCTGTTCTTCTGCCGCCACTGCCCCAAGCTGCGCTGTGGCTTCTGCGT GACGCATGAGATCGAGTCGCACTTCTGCTCCAACTGCCTGGAAAACATTC CCTCCACAGAGGCGCGCCACAAGAAGAACTGTTGTGCGAACTGCTTCGAC TGTCCTTGCTGCCAGCACACCCTTTCCGCCAGAGCATCTACCGTTCCGGT GGTGCGCAAGTCGGAGGAGGCGAAGGAACCAAAGGATGGCGACTCCAAGG GCGAAGCCACGCCCCCAGTCCCGGCGAGCAGCAAGCCCTCTGCGGTGCCC ACCACAAAAAAGATGTACTATTTGTCGTGCTTGTCCTGCCGATGGACCAC GCGAGATGTGGGCATTCCCGACCAAGGCGTGGCCACGGGCACCTGGCCGG ATAACGAGTGCTTGTACCAGGCGCGATTTAATGCTCTGGTCGAGTACTTC CAGGCGGTGGTGCTGCAGGAGAAGCAGGAGAAACTGGAGTTCATGCGGCG CAAGGCACCCAAGCAGCACAAGTTTCCCAGTCTGACGGATCGCACTGGAC TAACCGTCTCACTTATTCGCCGCCAAATCGGCTGGAACGACAAGGCTCCC AAGGCTAAAGCCGTGATAACGCCGGCAGAGGCCACGGCGGAGGTGGAGGG CCTGCCGGAGAACATTTTCACGGAACCCTTGAACTTGCGGAATGTGACAA CCATCACCCAGCGACATAGCCAGCCGGCGGACCAGCCCACGGCCGTTGGG AGTCTTTATCCTCAGCGCAGGTCCCTGTGGATTAAGCGGTCGCTTCGTTG CCGCCAGTGCGAGCACAATCTAATCAAACCGGAGTACCATCCCACATCGA TAAAGTACCGCATTCAGCACTTCGCCAGCTACCATGTTCCTGAAGTGGTG ATGGTGCGCTGCGAGCAGCCACTGGTGGCAGGAAAAAGCAACGCCATTTT GCTGAAGCTCACGAATCCGACTATATACGATATGACAATTCGACTGTTGA CTGCATCTCCTCCTGAGGATCCACAGCTGTCAACAGAGGCCACTCGTGTT GCGAAAGAGGAACCCATTTCTTCGTCCCCACTTCTAAAAGCAGTGGGCAT CACACTGTCGCGTCAAAACTCAACACGGGAGGTAAAACGAGATGTGATTG ATATATCCAATGCCGAAATAGTTCCGTTGGAGAGCGAGTTCGTTCTGAAC CAGCGCGATGACTCGAAAGAGTTCGACGAGGACGTGCAACTGTCCACCGA GGAGCCCAAGTTTATTGTCTGGCGGAAGGGCAACAAGGTGCTTTTGCGGC TACAGTTTACCCCAGCAGAGGAGCTGTCCGGATTAGCAGACGTCGTTCTG GGCTTCTATATGCAGTACACATACGTCAACACCGTAAACAATGCGCAAGA GAAGAGGGAACCCACAACCCATGTGCTCCACTCCAGGGTGTTTATCACGG CGGGAGCAACTGAGCAGAAAGCCAACTAAACTGGAAACTTATTAGCCAAC AGGCGTACTAATCGACTTATGCGAAATATGAAATATGCTTTATGAAAGCT AGAGAAATATGTATTTATTTATTAATCCGTTCGTGAAACAGCAGCTAGTA TTCAAGTATAATAAAAGGCTTGTTCTAACACTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3554555..3556336 | 1782..1 | 8895 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 7667247..7669029 | 1783..1 | 8915 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 7668446..7670228 | 1783..1 | 8915 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3554555..3556336 | 1..1782 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12042-RA | 1..1545 | 85..1629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12042-RA | 1..1545 | 85..1629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12042-RA | 1..1545 | 85..1629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12042-RA | 1..1545 | 85..1629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12042-RA | 1..1545 | 85..1629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12042-RA | 1..1782 | 1..1782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12042-RA | 1..1782 | 1..1782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12042-RA | 1..1782 | 1..1782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12042-RA | 1..1782 | 1..1782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12042-RA | 1..1782 | 1..1782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7667248..7669029 | 1..1782 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7667248..7669029 | 1..1782 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7667248..7669029 | 1..1782 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3554753..3556534 | 1..1782 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7668447..7670228 | 1..1782 | 100 | Minus |
Translation from 84 to 1628
> LD13436.pep MSFMQPSPVKYACSCGILNPINTLFFCRHCPKLRCGFCVTHEIESHFCSN CLENIPSTEARHKKNCCANCFDCPCCQHTLSARASTVPVVRKSEEAKEPK DGDSKGEATPPVPASSKPSAVPTTKKMYYLSCLSCRWTTRDVGIPDQGVA TGTWPDNECLYQARFNALVEYFQAVVLQEKQEKLEFMRRKAPKQHKFPSL TDRTGLTVSLIRRQIGWNDKAPKAKAVITPAEATAEVEGLPENIFTEPLN LRNVTTITQRHSQPADQPTAVGSLYPQRRSLWIKRSLRCRQCEHNLIKPE YHPTSIKYRIQHFASYHVPEVVMVRCEQPLVAGKSNAILLKLTNPTIYDM TIRLLTASPPEDPQLSTEATRVAKEEPISSSPLLKAVGITLSRQNSTREV KRDVIDISNAEIVPLESEFVLNQRDDSKEFDEDVQLSTEEPKFIVWRKGN KVLLRLQFTPAEELSGLADVVLGFYMQYTYVNTVNNAQEKREPTTHVLHS RVFITAGATEQKAN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11704-PA | 514 | GF11704-PA | 1..514 | 1..514 | 2208 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10724-PA | 514 | GG10724-PA | 1..514 | 1..514 | 2636 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20017-PA | 513 | GH20017-PA | 1..509 | 1..511 | 2191 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
DCTN4-p62-PA | 514 | CG12042-PA | 1..514 | 1..514 | 2722 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19197-PA | 512 | GI19197-PA | 1..504 | 1..507 | 2113 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10533-PA | 519 | GL10533-PA | 1..517 | 1..511 | 2310 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11356-PA | 519 | GA11356-PA | 1..517 | 1..511 | 2306 | 81.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20771-PA | 514 | GM20771-PA | 1..514 | 1..514 | 2733 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10231-PA | 514 | GD10231-PA | 1..514 | 1..514 | 2738 | 98.8 | Plus |
Dsim\GD15304-PA | 340 | GD15304-PA | 1..317 | 127..443 | 1672 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20263-PA | 512 | GJ20263-PA | 1..504 | 1..507 | 2193 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17803-PA | 518 | GK17803-PA | 1..518 | 1..512 | 2117 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23750-PA | 514 | GE23750-PA | 1..514 | 1..514 | 2632 | 94.7 | Plus |
Translation from 84 to 1628
> LD13436.hyp MSFMQPSPVKYACSCGILNPINTLFFCRHCPKLRCGFCVTHEIESHFCSN CLENIPSTEARHKKNCCANCFDCPCCQHTLSARASTVPVVRKSEEAKEPK DGDSKGEATPPVPASSKPSAVPTTKKMYYLSCLSCRWTTRDVGIPDQGVA TGTWPDNECLYQARFNALVEYFQAVVLQEKQEKLEFMRRKAPKQHKFPSL TDRTGLTVSLIRRQIGWNDKAPKAKAVITPAEATAEVEGLPENIFTEPLN LRNVTTITQRHSQPADQPTAVGSLYPQRRSLWIKRSLRCRQCEHNLIKPE YHPTSIKYRIQHFASYHVPEVVMVRCEQPLVAGKSNAILLKLTNPTIYDM TIRLLTASPPEDPQLSTEATRVAKEEPISSSPLLKAVGITLSRQNSTREV KRDVIDISNAEIVPLESEFVLNQRDDSKEFDEDVQLSTEEPKFIVWRKGN KVLLRLQFTPAEELSGLADVVLGFYMQYTYVNTVNNAQEKREPTTHVLHS RVFITAGATEQKAN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12042-PA | 514 | CG12042-PA | 1..514 | 1..514 | 2722 | 100 | Plus |