Clone LD13578 Report

Search the DGRC for LD13578

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:135
Well:78
Vector:pBS SK-
Associated Gene/Transcriptglu-RA
Protein status:LD13578.pep: gold
Sequenced Size:4541

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
glu 2008-04-29 Release 5.5 accounting
glu 2008-04-29 Picked prior to 5.5
glu 2008-08-15 Release 5.9 accounting
glu 2008-12-18 5.12 accounting

Clone Sequence Records

LD13578.complete Sequence

4541 bp assembled on 2007-11-08

GenBank Submission: BT031125

> LD13578.complete
CCGAAAAAGCGATTTTGTAATTCGAGGATTTTTCCTGGATAAATCCACAC
GGAGAATTTACTGAGAATAGCGCACGATGCAGAAGGCGCGTCCCAGCAAG
GGCACGCCCAAGGCAGCTGGCGGAGCCCGGCAGAGCGGCCAGTTTCGCGT
ACCGCAGCTAACTGCTCAGCAACAATTGCGGGCGCAGCAACAACAGGAGG
AGGAGGACGCCGCCGTGGACGCGCTGGATGATGCACTGATCTTCGACGAC
GAGGAGGGCGGCACCCGGATCGGCGACATATACATACCGCCTCCGGTGCC
GCCACATTGCTCCATGGAGAGCACCGGACCGCGCCTGATCATCTCGAAAA
TTGTAAATCGGAATTTCAAGAGCTATGCGGGCGAAGTGGAATTGGGTCCC
TTCCACCAGAGCTTCACTGCCATCATTGGACCCAATGGCAGTGGCAAGAG
CAACGTTATCGACTCCATGATGTTTGTGTTTGGTTGCCGCGCCAATCGCA
TCCGTTGCAAGCGTGTCTCCACCTTGATCCACTCCTCGTCTAGTTATCCC
AATTTACGCAGCTGCTCGGTCGCCGTCCACTTCAAGCAGATCGTAGACAA
GGGCGACGGCACATGCGAGGACGTGCCCGACTCCAGCATTGTTATCGAAC
GCACTGCCATGTCGGACAACTCTTCCTACTACCAGATCAACGACAAACGG
GCGCAGCTCAAGGATGTGGCTAAGCTGCTTAAGAAGCATCATGTGGATCT
GGAGCACAATCGCTTCCTCATTCTGCAGGGCGAAGTGGAGTCCATTGCCA
TGATGAAGCCAAAAGGGCAGACTGAAAATGAAACTGGAATGTTGGAATAC
CTGGAGGATATTGTCGGAACACAGCGCTACATTCGCCCACTGCAGCAGAT
AAACCAACGGGTAGATCAACTCACAGACGACCGAACAGAGAAGCACAACC
GCTGCAAGCTGGCCGAGCGCGAGATGAAAGATCTGGAGCAACCGTTCAAT
GAGGCCGTCGACTATCTGAAGAAGGAGAATGAGCTGGTGCGCACCAAATC
CTTCCACATCCAAAAGATCATCAGCATCAAAAAGAGCAAGCTGGAGCAGT
ACACCCAGGAGCATGAAGCCTGTGCGGAAGAGCTAAAAACCCACGACGAG
GGCACTGCTGCCCTGAAACAATCACGAGCCGAAAAGGAAACAATCATCCG
AAAGGAAATTGAAGAATACGAAGCTCTAGTGAAAAAGCGCGAACAGATCA
AGAAAAGACTTGTGACTGTTGAGAGTGCCTACACAGAGATCCAGAGCACA
ATGGAGAACACGAACAAGCAGCGCAAGAAGGACAAAGCCCAGATAGAAAA
GAACGAAAAAGAGCTGGAGGATCTGCACAAGTTGCCGGAGAAAAATCAGC
GCGAGATCGAGGATTGCAACAAGAAATTGGAGAGCCTGGAAGTAAGTAAG
GTGACACTGAATGAGGAGCTTGAAAAGCAGCAGGCCGAGTTAACTAAAAC
CACTGCACCGCTTACCGAGAAGCGCCTTAAGCTCAGTGACGAACTGGTGG
GCCTTAAGGAGAAGGTCAACACGGCTAAAGGAGAGGTTCAAGTGTTCGAG
TCGCAGCTCAAGATCCTTAAACAGGCAGAGACCACTGAGTCTAGGAAATA
TGAAACCCTAAAAAGTTCGTACGAGCAGTCGCAGAAAAGTCTGGAGGAGA
AAGTAACAAGGGTGGACGAGCTGAAAGAAAGCATTCCACGGATGAAGACC
GAAATTGCCAGCAAGTCCGCGGAAGTGGACAAAATGGTTAAAGAGGAACG
CAACCTATCCATGCAGTGCAACAAACTAAGAACAGAGATCAATGAAAGAT
CTAGCGTCATGCAGGCTCAGCGATCCAATAACAAGGTCCTAGACTTCCTC
ATGCGTATGAAGATGGAGGGAAAGATCCCTGGTATTCTAGGACGCCTGGG
TGATTTGGGTGGCATAGATGCCAAGTACGACATTGCTATTTCGACTGCCT
GCGGGCGGTTGGACAACATTGTTACGGACAACTATGAGACCGCATCGGCG
GCCATTGGCGCTTTAAAGGAGTACAACGTGGGCAGAGCCACCTTTATTAC
GTTGGACAAGATTGAGCACCATCGTCGTGAGGCCAACTCCAGGATAAATA
CACCAGAAAACGTTCCTCGTTTGTACGATCTGGTTAAGGTTGAAGATGAC
CGCGTACGAACCGCTTTCTATTTCGCCCTACGGAACACACTGGTATGTGA
CGATCTAGAACAGGGCACCCGCATCGCCTACGGCAGGGAACGCTACCGAG
TTGTGACCTTACGTGGTGAGATGATCGAGATGACGGGAACCATGTCTGGT
GGCGGCAGTCGTCCTATACGCGGAAAAATGGGCACCCAGGTGCGCACCAA
GACGGCAGAATCGGCTGACAGTTCGCAAATATCTCAGAAGGCGTTAGAAG
ACATGCAGATTCAGGCGGAGGAGTTACAGGCCCGAGTCAATTATTGCCAG
GAACAGCAGGGCAGTCTTGAGCGCGAGATTCAAACCCTGAAGAATGGCTT
GCAGCGTGACGAGGCGGAGTACAAGCGGCTGGCGGTGAGCATCACTTCTT
TGGAACAACAGATGGCCAGCAACCTGAAGCAATGCGAGGCGCAGCGGCAG
CGAATGCTCAAGAAAACAACAGACGAAAGGGCAGTCAAGGAGCGGGAGGA
GCAAATAGAAGCAGCGAAGCAAGAGCTGGAACAAGCACAATTCGCCGAAC
AGGCTGTCTCCAGCCAAATCGAAGAGATCCAGAACCAATACGATACCCTT
AGAAATGAAAGTGTCAAGCCTGTGGAGGCCAAGATCAAGAAGGTAAATAG
CCAGATAGAAAAGCTGGCCGCCAATGTGCGGTCCTTGAATGTGGGCTTGG
CCACAGCAGATCGAAATATAACGAAAATCACTGGAAACAATAATAATCTC
CGTGAGAATATAAAAGCTGCAGAAGAAAAATTGAAATCGTTGAATGAGGA
TCGAAATAAGGCTAAGGAAAAGAAGGAGGAGTTGGAAAAGGAAATAGAGG
AATCGGAAGCGTCCATCGAGGGCGCCAAATCACAATCCTCCGATATAAAA
AAAGAAATAGATGAGATCACCAAGGAGGAGAACAAACGAAATATCGAGCG
CATTGAAATAGATACTAAGCTGCAAGCTGCAGCGGGAAAAATGAACAAGG
TGAAGAATGACATTCCCGGATGGCAGGCTCAACTGGCGCCTTTGAAGCTC
AACGAGATTCCAGGAGAGACTGAACCGCAAGCGCCACTCAAAGAACTCAA
CGAAGAAGAGCTGGAGGCAGAGACTCTGGAAGCCTTGCAATATAAGCAAA
CTATGCTGGAGGAAGATCTGAAAACAAAGAAGCCCAACTTGAGTTGCATA
AAGGAGTTCAACGAGAAGCGCTTAGTCTACCTCGATCGCGTCCGTGTGCT
GGAGGACATCACCTCCAAGCGCAATGAGATGCGCGACAAGTACGAAGAAG
TTCGCAAGCGACGGTACAAGGAGTTCATGGATGGCTTTAGCATTATAACA
AGAAAACTGAAGGAAATGTACCAGATGATCACACTGGGCGGCGATGCTGA
GCTGGAGCTGGTGGACTCCATGGATCCGTTCACCGAGGGCGTAAATTTTA
CTGTGCGACCGCCAAAGAAAAGCTGGAAATACATCTCGAATCTCTCAGGT
GGTGAGAAAACTCTCTCCTCATTGGCACTTGTGTTTGCCCTGCATTATTA
CAAGCCCTCTCCGCTGTACTTCATGGATGAAATTGATGCGGCGCTGGATT
TCAAGAATGTGTCTATAGTGGGTCACTATATCAAGGAACGTACGAAAAAC
GCTCAGTTCATAATTGTTTCACTTCGTGTCAACATGTTTGAGCTGGCCAA
CTTCCTGGTGGGCATATACAAGGTCAGCGATTGTACGGACTCCATCACTA
TGCTGAACTATCCGCCTACGCTGCCCACTCAGTCGCCAGTGGTCGCTAAC
AGCCAGTACGTGGGTGGAACAATTGAGGGGGATAACACGATAGCTGCCGA
GAACCAAGACGATACCCCCACGAAGAAGAGCCAATCGCCGCCGTCAGAGC
AAATAGTCCGCTTGATTAGTGAGTTGGGGAGGGATACCACATTTGCGCCG
CCCTTGGAAAGTACGGTGAGGGACACAATACTCGCGCAAAATCTGAAACA
GGCCGCCACTGAGGTTGCTGCTCAACCGTCAGATGCCACGGGAAGAGTAA
CCACGGATGTGTCCCTAGCAAGCCCGCCATCTTCCCCAGCCATACTTAAT
GTTTAACTCCAACCTACTTCAATATTGTAGAATGTTTTCTTATCCTGTAA
AGGGGCATGTTGTAAACTGCCTGGTAATCTAATTTCTGGTAAAGACCGAG
ACGTAATTTGATGACCTCAGGTGAATCGGTATTTCCAATTGGTATTATCC
TTTCAATGCTTAATAATAAATGTTACATAAAATTGTAAAAAAAAAAAAAA
AAAAAAAAAAAAAATAAAAAATAAAAAAAAAAAAAAAAAAA

LD13578.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:34:36
Subject Length Description Subject Range Query Range Score Percent Strand
glu-RA 4640 glu-RA 153..4639 1..4487 22435 100 Plus
glu.a 4529 glu.a 20..3854 1..3835 19175 100 Plus
glu.a 4529 glu.a 3877..4529 3834..4486 3265 100 Plus
CG17904-RA 1480 CG17904-RA 1056..1480 4487..4063 2125 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:13:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 16733077..16734761 3836..2152 8380 99.8 Minus
chr2L 23010047 chr2L 16735884..16737095 1212..1 5985 99.6 Minus
chr2L 23010047 chr2L 16732358..16733011 4487..3834 3255 99.8 Minus
chr2L 23010047 chr2L 16735198..16735822 1837..1213 3095 99.7 Minus
chr2L 23010047 chr2L 16734823..16735138 2151..1836 1580 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:00:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:12:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16734335..16736019 3836..2152 8425 100 Minus
2L 23513712 2L 16737142..16738353 1212..1 6060 100 Minus
2L 23513712 2L 16733616..16734269 4487..3834 3270 100 Minus
2L 23513712 2L 16736456..16737080 1837..1213 3125 100 Minus
2L 23513712 2L 16736081..16736396 2151..1836 1580 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:31:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16734335..16736019 3836..2152 8425 100 Minus
2L 23513712 2L 16737142..16738353 1212..1 6060 100 Minus
2L 23513712 2L 16733616..16734269 4487..3834 3270 100 Minus
2L 23513712 2L 16736456..16737080 1837..1213 3125 100 Minus
2L 23513712 2L 16736081..16736396 2151..1836 1580 100 Minus
Blast to na_te.dros performed 2019-03-15 23:12:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Helena 691 Dvir\Helena DV26847 691bp Derived from U26847 (Rel. 63, Last updated, Version 2). 634..691 4452..4513 175 79 Plus

LD13578.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:13:45 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 16732359..16733009 3836..4486 99 <- Minus
chr2L 16733078..16734761 2152..3835 99 <- Minus
chr2L 16734823..16735136 1838..2151 100 <- Minus
chr2L 16735198..16735822 1213..1837 99 <- Minus
chr2L 16735884..16737095 1..1212 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:47:41 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
glu-RA 1..4230 77..4306 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:04:05 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
glu-RA 1..4230 77..4306 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:32:18 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
glu-RA 1..4230 77..4306 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:49:46 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
glu-RA 1..4230 77..4306 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:23:41 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
glu-RA 1..4230 77..4306 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:55:18 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
glu-RA 20..4505 1..4486 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:04:05 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
glu-RA 20..4505 1..4486 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:32:18 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
glu-RA 36..4521 1..4486 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:49:47 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
glu-RA 20..4505 1..4486 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:23:41 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
glu-RA 36..4521 1..4486 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:45 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16733617..16734267 3836..4486 100 <- Minus
2L 16734336..16736019 2152..3835 100 <- Minus
2L 16736081..16736394 1838..2151 100 <- Minus
2L 16736456..16737080 1213..1837 100 <- Minus
2L 16737142..16738353 1..1212 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:45 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16733617..16734267 3836..4486 100 <- Minus
2L 16734336..16736019 2152..3835 100 <- Minus
2L 16736081..16736394 1838..2151 100 <- Minus
2L 16736456..16737080 1213..1837 100 <- Minus
2L 16737142..16738353 1..1212 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:45 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16733617..16734267 3836..4486 100 <- Minus
2L 16734336..16736019 2152..3835 100 <- Minus
2L 16736081..16736394 1838..2151 100 <- Minus
2L 16736456..16737080 1213..1837 100 <- Minus
2L 16737142..16738353 1..1212 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:32:18 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16733617..16734267 3836..4486 100 <- Minus
arm_2L 16734336..16736019 2152..3835 100 <- Minus
arm_2L 16736081..16736394 1838..2151 100 <- Minus
arm_2L 16736456..16737080 1213..1837 100 <- Minus
arm_2L 16737142..16738353 1..1212 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:56:09 Download gff for LD13578.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16733617..16734267 3836..4486 100 <- Minus
2L 16734336..16736019 2152..3835 100 <- Minus
2L 16736081..16736394 1838..2151 100 <- Minus
2L 16736456..16737080 1213..1837 100 <- Minus
2L 16737142..16738353 1..1212 100   Minus

LD13578.pep Sequence

Translation from 76 to 4305

> LD13578.pep
MQKARPSKGTPKAAGGARQSGQFRVPQLTAQQQLRAQQQQEEEDAAVDAL
DDALIFDDEEGGTRIGDIYIPPPVPPHCSMESTGPRLIISKIVNRNFKSY
AGEVELGPFHQSFTAIIGPNGSGKSNVIDSMMFVFGCRANRIRCKRVSTL
IHSSSSYPNLRSCSVAVHFKQIVDKGDGTCEDVPDSSIVIERTAMSDNSS
YYQINDKRAQLKDVAKLLKKHHVDLEHNRFLILQGEVESIAMMKPKGQTE
NETGMLEYLEDIVGTQRYIRPLQQINQRVDQLTDDRTEKHNRCKLAEREM
KDLEQPFNEAVDYLKKENELVRTKSFHIQKIISIKKSKLEQYTQEHEACA
EELKTHDEGTAALKQSRAEKETIIRKEIEEYEALVKKREQIKKRLVTVES
AYTEIQSTMENTNKQRKKDKAQIEKNEKELEDLHKLPEKNQREIEDCNKK
LESLEVSKVTLNEELEKQQAELTKTTAPLTEKRLKLSDELVGLKEKVNTA
KGEVQVFESQLKILKQAETTESRKYETLKSSYEQSQKSLEEKVTRVDELK
ESIPRMKTEIASKSAEVDKMVKEERNLSMQCNKLRTEINERSSVMQAQRS
NNKVLDFLMRMKMEGKIPGILGRLGDLGGIDAKYDIAISTACGRLDNIVT
DNYETASAAIGALKEYNVGRATFITLDKIEHHRREANSRINTPENVPRLY
DLVKVEDDRVRTAFYFALRNTLVCDDLEQGTRIAYGRERYRVVTLRGEMI
EMTGTMSGGGSRPIRGKMGTQVRTKTAESADSSQISQKALEDMQIQAEEL
QARVNYCQEQQGSLEREIQTLKNGLQRDEAEYKRLAVSITSLEQQMASNL
KQCEAQRQRMLKKTTDERAVKEREEQIEAAKQELEQAQFAEQAVSSQIEE
IQNQYDTLRNESVKPVEAKIKKVNSQIEKLAANVRSLNVGLATADRNITK
ITGNNNNLRENIKAAEEKLKSLNEDRNKAKEKKEELEKEIEESEASIEGA
KSQSSDIKKEIDEITKEENKRNIERIEIDTKLQAAAGKMNKVKNDIPGWQ
AQLAPLKLNEIPGETEPQAPLKELNEEELEAETLEALQYKQTMLEEDLKT
KKPNLSCIKEFNEKRLVYLDRVRVLEDITSKRNEMRDKYEEVRKRRYKEF
MDGFSIITRKLKEMYQMITLGGDAELELVDSMDPFTEGVNFTVRPPKKSW
KYISNLSGGEKTLSSLALVFALHYYKPSPLYFMDEIDAALDFKNVSIVGH
YIKERTKNAQFIIVSLRVNMFELANFLVGIYKVSDCTDSITMLNYPPTLP
TQSPVVANSQYVGGTIEGDNTIAAENQDDTPTKKSQSPPSEQIVRLISEL
GRDTTFAPPLESTVRDTILAQNLKQAATEVAAQPSDATGRVTTDVSLASP
PSSPAILNV*

LD13578.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:39:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24329-PA 1404 GF24329-PA 1..1399 1..1404 5916 80.9 Plus
Dana\GF23004-PA 1236 GF23004-PA 7..1213 67..1280 713 25.9 Plus
Dana\GF11775-PA 688 GF11775-PA 1..580 87..680 210 23.4 Plus
Dana\GF19780-PA 434 GF19780-PA 331..410 1200..1278 205 45 Plus
Dana\GF21472-PA 1190 GF21472-PA 1042..1174 1153..1287 176 34.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:39:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20110-PA 1409 GG20110-PA 1..1409 1..1409 6759 93.3 Plus
Dere\GG11251-PA 1238 GG11251-PA 34..1215 96..1280 706 25.8 Plus
Dere\GG18245-PA 1200 GG18245-PA 3..1184 89..1287 339 22.8 Plus
Dere\GG22392-PA 1179 GG22392-PA 1..928 87..1021 276 23.4 Plus
Dere\GG22392-PA 1179 GG22392-PA 1042..1155 1164..1278 213 37.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:40:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10207-PA 1348 GH10207-PA 2..1342 5..1363 4823 67.8 Plus
Dgri\GH18490-PA 1240 GH18490-PA 4..1224 57..1286 692 26.1 Plus
Dgri\GH20475-PA 1176 GH20475-PA 519..1167 616..1284 250 22.7 Plus
Dgri\GH17849-PA 1200 GH17849-PA 1063..1184 1171..1287 175 35.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:51:34
Subject Length Description Subject Range Query Range Score Percent Strand
glu-PA 1409 CG11397-PA 1..1409 1..1409 7087 100 Plus
SMC1-PA 1238 CG6057-PA 34..1215 96..1280 896 25.7 Plus
SMC2-PA 1179 CG10212-PA 1..1154 87..1277 619 22.6 Plus
SMC3-PA 1200 CG9802-PA 3..1172 89..1280 571 22.3 Plus
zip-PH 1964 CG15792-PH 1076..1896 203..1027 308 20.3 Plus
zip-PG 1971 CG15792-PG 1068..1888 203..1027 308 20.3 Plus
zip-PE 1971 CG15792-PE 1068..1888 203..1027 308 20.3 Plus
zip-PC 1971 CG15792-PC 1068..1888 203..1027 308 20.3 Plus
zip-PF 1979 CG15792-PF 1076..1896 203..1027 308 20.3 Plus
zip-PB 2011 CG15792-PB 1108..1928 203..1027 308 20.3 Plus
zip-PD 2016 CG15792-PD 1113..1933 203..1027 308 20.3 Plus
zip-PI 2024 CG15792-PI 1121..1941 203..1027 308 20.3 Plus
zip-PA 2056 CG15792-PA 1153..1973 203..1027 308 20.3 Plus
zip-PH 1964 CG15792-PH 846..1739 299..1144 292 20.4 Plus
zip-PG 1971 CG15792-PG 838..1731 299..1144 292 20.4 Plus
zip-PE 1971 CG15792-PE 838..1731 299..1144 292 20.4 Plus
zip-PC 1971 CG15792-PC 838..1731 299..1144 292 20.4 Plus
zip-PF 1979 CG15792-PF 846..1739 299..1144 292 20.4 Plus
zip-PB 2011 CG15792-PB 878..1771 299..1144 292 20.4 Plus
zip-PD 2016 CG15792-PD 883..1776 299..1144 292 20.4 Plus
zip-PI 2024 CG15792-PI 891..1784 299..1144 292 20.4 Plus
zip-PA 2056 CG15792-PA 923..1816 299..1144 292 20.4 Plus
CLIP-190-PN 1598 CG5020-PN 422..1414 191..1177 285 19.8 Plus
CLIP-190-PR 1601 CG5020-PR 425..1417 191..1177 285 19.8 Plus
CLIP-190-PP 1623 CG5020-PP 447..1439 191..1177 285 19.8 Plus
CLIP-190-PC 1652 CG5020-PC 476..1468 191..1177 285 19.8 Plus
CLIP-190-PS 1653 CG5020-PS 477..1469 191..1177 285 19.8 Plus
CLIP-190-PM 1668 CG5020-PM 492..1484 191..1177 285 19.8 Plus
CLIP-190-PB 1689 CG5020-PB 513..1505 191..1177 285 19.8 Plus
CLIP-190-PA 1690 CG5020-PA 514..1506 191..1177 285 19.8 Plus
Golgin245-PA 1489 CG3493-PA 220..1176 192..1147 266 17.6 Plus
CLIP-190-PN 1598 CG5020-PN 552..1418 203..1099 265 21.2 Plus
CLIP-190-PR 1601 CG5020-PR 555..1421 203..1099 265 21.2 Plus
CLIP-190-PP 1623 CG5020-PP 577..1443 203..1099 265 21.2 Plus
CLIP-190-PC 1652 CG5020-PC 606..1472 203..1099 265 21.2 Plus
CLIP-190-PS 1653 CG5020-PS 607..1473 203..1099 265 21.2 Plus
CLIP-190-PM 1668 CG5020-PM 622..1488 203..1099 265 21.2 Plus
CLIP-190-PB 1689 CG5020-PB 643..1509 203..1099 265 21.2 Plus
CLIP-190-PA 1690 CG5020-PA 644..1510 203..1099 265 21.2 Plus
brp-PL 1781 CG42344-PL 371..1266 163..1043 264 17.2 Plus
Mhc-PU 1949 CG17927-PU 1018..1913 168..1085 263 20.9 Plus
Mhc-PN 1949 CG17927-PN 1018..1913 168..1085 263 20.9 Plus
Mhc-PE 1962 CG17927-PE 1018..1913 168..1085 263 20.9 Plus
Mhc-PH 1962 CG17927-PH 1018..1913 168..1085 263 20.9 Plus
Mhc-PT 1962 CG17927-PT 1018..1913 168..1085 263 20.9 Plus
Mhc-PO 1962 CG17927-PO 1018..1913 168..1085 263 20.9 Plus
Mhc-PF 1962 CG17927-PF 1018..1913 168..1085 263 20.9 Plus
Mhc-PQ 1962 CG17927-PQ 1018..1913 168..1085 263 20.9 Plus
Mhc-PI 1962 CG17927-PI 1018..1913 168..1085 263 20.9 Plus
Mhc-PG 1962 CG17927-PG 1018..1913 168..1085 263 20.9 Plus
Mhc-PA 1962 CG17927-PA 1018..1913 168..1085 263 20.9 Plus
Mhc-PD 1962 CG17927-PD 1018..1913 168..1085 263 20.9 Plus
Mhc-PC 1962 CG17927-PC 1018..1913 168..1085 263 20.9 Plus
Mhc-PR 1962 CG17927-PR 1018..1913 168..1085 263 20.9 Plus
CLIP-190-PN 1598 CG5020-PN 572..1532 181..1107 257 19.3 Plus
CLIP-190-PR 1601 CG5020-PR 575..1535 181..1107 257 19.3 Plus
CLIP-190-PP 1623 CG5020-PP 597..1557 181..1107 257 19.3 Plus
CLIP-190-PC 1652 CG5020-PC 626..1586 181..1107 257 19.3 Plus
CLIP-190-PS 1653 CG5020-PS 627..1587 181..1107 257 19.3 Plus
CLIP-190-PM 1668 CG5020-PM 642..1602 181..1107 257 19.3 Plus
CLIP-190-PB 1689 CG5020-PB 663..1623 181..1107 257 19.3 Plus
CLIP-190-PA 1690 CG5020-PA 664..1624 181..1107 257 19.3 Plus
Mhc-PL 1936 CG17927-PL 1018..1913 168..1085 256 20.2 Plus
Mhc-PM 1936 CG17927-PM 1018..1913 168..1085 256 20.2 Plus
Mhc-PK 1936 CG17927-PK 1018..1913 168..1085 256 20.2 Plus
Mhc-PP 1949 CG17927-PP 1018..1913 168..1085 256 20.2 Plus
Mhc-PV 1962 CG17927-PV 1018..1913 168..1085 256 20.2 Plus
Mhc-PS 1962 CG17927-PS 1018..1913 168..1085 256 20.2 Plus
Mhc-PB 1962 CG17927-PB 1018..1913 168..1085 256 20.2 Plus
brp-PI 1397 CG42344-PI 50..882 163..1043 249 18.1 Plus
mud-PK 1912 CG12047-PK 980..1877 243..1151 241 20.1 Plus
brp-PK 1707 CG42344-PK 219..1124 280..1144 227 17.7 Plus
Golgin245-PA 1489 CG3493-PA 153..883 375..1148 223 19.2 Plus
brp-PL 1781 CG42344-PL 367..1210 220..1084 222 17.2 Plus
Mhc-PL 1936 CG17927-PL 853..1640 340..1138 222 20 Plus
Mhc-PM 1936 CG17927-PM 853..1640 340..1138 222 20 Plus
Mhc-PK 1936 CG17927-PK 853..1640 340..1138 222 20 Plus
Mhc-PP 1949 CG17927-PP 853..1640 340..1138 222 20 Plus
Mhc-PV 1962 CG17927-PV 853..1640 340..1138 222 20 Plus
Mhc-PS 1962 CG17927-PS 853..1640 340..1138 222 20 Plus
Mhc-PB 1962 CG17927-PB 853..1640 340..1138 222 20 Plus
mud-PL 2501 CG12047-PL 980..1823 243..1145 218 19.6 Plus
brp-PL 1781 CG42344-PL 145..915 411..1183 217 17.4 Plus
mud-PL 2501 CG12047-PL 1080..1997 202..1099 216 18.7 Plus
brp-PK 1707 CG42344-PK 145..863 411..1148 214 18.1 Plus
brp-PH 1740 CG42344-PH 324..1169 220..1084 214 17.3 Plus
brp-PE 1740 CG42344-PE 324..1169 220..1084 214 17.3 Plus
brp-PD 1740 CG42344-PD 324..1169 220..1084 214 17.3 Plus
brp-PI 1397 CG42344-PI 54..826 309..1084 200 19.8 Plus
brp-PI 1397 CG42344-PI 16..814 338..1144 198 18.1 Plus
brp-PK 1707 CG42344-PK 203..1136 191..1084 196 18.4 Plus
Mhc-PU 1949 CG17927-PU 997..1450 745..1138 188 21.6 Plus
Mhc-PN 1949 CG17927-PN 997..1450 745..1138 188 21.6 Plus
Mhc-PE 1962 CG17927-PE 997..1450 745..1138 188 21.6 Plus
Mhc-PH 1962 CG17927-PH 997..1450 745..1138 188 21.6 Plus
Mhc-PT 1962 CG17927-PT 997..1450 745..1138 188 21.6 Plus
Mhc-PO 1962 CG17927-PO 997..1450 745..1138 188 21.6 Plus
Mhc-PF 1962 CG17927-PF 997..1450 745..1138 188 21.6 Plus
Mhc-PQ 1962 CG17927-PQ 997..1450 745..1138 188 21.6 Plus
Mhc-PI 1962 CG17927-PI 997..1450 745..1138 188 21.6 Plus
Mhc-PG 1962 CG17927-PG 997..1450 745..1138 188 21.6 Plus
Mhc-PA 1962 CG17927-PA 997..1450 745..1138 188 21.6 Plus
Mhc-PD 1962 CG17927-PD 997..1450 745..1138 188 21.6 Plus
Mhc-PC 1962 CG17927-PC 997..1450 745..1138 188 21.6 Plus
Mhc-PR 1962 CG17927-PR 997..1450 745..1138 188 21.6 Plus
zip-PG 1971 CG15792-PG 1528..1932 190..594 182 20 Plus
zip-PE 1971 CG15792-PE 1528..1932 190..594 182 20 Plus
zip-PC 1971 CG15792-PC 1528..1932 190..594 182 20 Plus
zip-PF 1979 CG15792-PF 1536..1940 190..594 182 20 Plus
zip-PB 2011 CG15792-PB 1568..1972 190..594 182 20 Plus
zip-PD 2016 CG15792-PD 1573..1977 190..594 182 20 Plus
zip-PI 2024 CG15792-PI 1581..1985 190..594 182 20 Plus
zip-PA 2056 CG15792-PA 1613..2017 190..594 182 20 Plus
Mhc-PU 1949 CG17927-PU 853..1591 340..1148 181 19.2 Plus
Mhc-PN 1949 CG17927-PN 853..1591 340..1148 181 19.2 Plus
Mhc-PE 1962 CG17927-PE 853..1591 340..1148 181 19.2 Plus
Mhc-PH 1962 CG17927-PH 853..1591 340..1148 181 19.2 Plus
Mhc-PT 1962 CG17927-PT 853..1591 340..1148 181 19.2 Plus
Mhc-PO 1962 CG17927-PO 853..1591 340..1148 181 19.2 Plus
Mhc-PF 1962 CG17927-PF 853..1591 340..1148 181 19.2 Plus
Mhc-PQ 1962 CG17927-PQ 853..1591 340..1148 181 19.2 Plus
Mhc-PI 1962 CG17927-PI 853..1591 340..1148 181 19.2 Plus
Mhc-PG 1962 CG17927-PG 853..1591 340..1148 181 19.2 Plus
Mhc-PA 1962 CG17927-PA 853..1591 340..1148 181 19.2 Plus
Mhc-PD 1962 CG17927-PD 853..1591 340..1148 181 19.2 Plus
Mhc-PC 1962 CG17927-PC 853..1591 340..1148 181 19.2 Plus
Mhc-PR 1962 CG17927-PR 853..1591 340..1148 181 19.2 Plus
zip-PH 1964 CG15792-PH 1536..1934 190..588 180 20.3 Plus
brp-PI 1397 CG42344-PI 197..553 771..1148 179 18.8 Plus
mud-PK 1912 CG12047-PK 781..1725 207..1164 179 18.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:40:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14952-PA 1396 GI14952-PA 2..1375 5..1381 5134 74 Plus
Dmoj\GI24164-PA 1240 GI24164-PA 34..1224 96..1286 677 26 Plus
Dmoj\GI21017-PA 1177 GI21017-PA 1..932 87..1014 246 21.2 Plus
Dmoj\GI10989-PA 1200 GI10989-PA 1063..1184 1171..1287 175 35.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:40:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19336-PA 729 GL19336-PA 1..729 500..1227 2778 77.7 Plus
Dper\GL23399-PA 1235 GL23399-PA 34..1219 96..1286 707 25.8 Plus
Dper\GL19337-PA 178 GL19337-PA 1..174 1237..1404 391 49 Plus
Dper\GL10652-PA 1181 GL10652-PA 1035..1154 1157..1277 207 36.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:40:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25921-PB 986 GA25921-PB 3..984 6..988 3976 78.3 Plus
Dpse\GA25922-PA 387 GA25922-PA 1..383 1028..1404 1301 65.3 Plus
Dpse\GA19328-PA 1238 GA19328-PA 34..1222 96..1286 705 25.9 Plus
Dpse\GA22046-PA 1200 GA22046-PA 3..1184 89..1287 307 23 Plus
Dpse\GA10161-PA 1181 GA10161-PA 1035..1155 1157..1278 207 35.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:40:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17160-PA 1409 GM17160-PA 1..1409 1..1409 7317 97.2 Plus
Dsec\GM26555-PA 1194 GM26555-PA 34..1171 96..1280 645 25.2 Plus
Dsec\GM13388-PA 1180 GM13388-PA 3..1164 89..1287 320 22.6 Plus
Dsec\GM20175-PA 1179 GM20175-PA 1076..1155 1200..1278 205 45 Plus
Dsec\GM20175-PA 1179 GM20175-PA 1..174 87..268 197 27.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:40:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21899-PA 1136 GD21899-PA 1..880 1..880 4574 97.6 Plus
Dsim\GD21899-PA 1136 GD21899-PA 788..1136 1072..1409 1299 76 Plus
Dsim\GD21062-PA 800 GD21062-PA 7..777 506..1280 454 24.3 Plus
Dsim\GD21061-PA 429 GD21061-PA 34..410 96..475 302 29.7 Plus
Dsim\GD25652-PA 1179 GD25652-PA 1077..1156 1200..1278 205 45 Plus
Dsim\GD25652-PA 1179 GD25652-PA 1..175 87..268 195 28.2 Plus
Dsim\GD15741-PA 1032 GD15741-PA 913..1016 1191..1287 176 37.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:40:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24094-PA 1390 GJ24094-PA 2..1389 5..1408 5159 72.1 Plus
Dvir\GJ14197-PA 1240 GJ14197-PA 10..1224 72..1286 688 25.4 Plus
Dvir\GJ21940-PA 1177 GJ21940-PA 1031..1155 1153..1278 198 31.7 Plus
Dvir\GJ19101-PA 1130 GJ19101-PA 3..656 89..771 174 22.5 Plus
Dvir\GJ19101-PA 1130 GJ19101-PA 993..1114 1171..1287 173 35.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:40:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21116-PA 1329 GK21116-PA 2..1327 5..1339 5068 75.1 Plus
Dwil\GK11152-PA 1237 GK11152-PA 3..1221 57..1286 692 25.9 Plus
Dwil\GK23290-PA 1180 GK23290-PA 519..1155 616..1278 278 23.3 Plus
Dwil\GK25447-PA 1201 GK25447-PA 1063..1185 1171..1287 175 35.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:40:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13167-PA 1410 GE13167-PA 1..1410 1..1409 6783 95 Plus
Dyak\GE23444-PA 1238 GE23444-PA 34..1215 96..1280 720 26.1 Plus
Dyak\GE12281-PA 1179 GE12281-PA 1..1155 87..1278 381 22.8 Plus
Dyak\GE15959-PA 1200 GE15959-PA 3..1184 89..1287 326 22.6 Plus

LD13578.hyp Sequence

Translation from 76 to 4305

> LD13578.hyp
MQKARPSKGTPKAAGGARQSGQFRVPQLTAQQQLRAQQQQEEEDAAVDAL
DDALIFDDEEGGTRIGDIYIPPPVPPHCSMESTGPRLIISKIVNRNFKSY
AGEVELGPFHQSFTAIIGPNGSGKSNVIDSMMFVFGCRANRIRCKRVSTL
IHSSSSYPNLRSCSVAVHFKQIVDKGDGTCEDVPDSSIVIERTAMSDNSS
YYQINDKRAQLKDVAKLLKKHHVDLEHNRFLILQGEVESIAMMKPKGQTE
NETGMLEYLEDIVGTQRYIRPLQQINQRVDQLTDDRTEKHNRCKLAEREM
KDLEQPFNEAVDYLKKENELVRTKSFHIQKIISIKKSKLEQYTQEHEACA
EELKTHDEGTAALKQSRAEKETIIRKEIEEYEALVKKREQIKKRLVTVES
AYTEIQSTMENTNKQRKKDKAQIEKNEKELEDLHKLPEKNQREIEDCNKK
LESLEVSKVTLNEELEKQQAELTKTTAPLTEKRLKLSDELVGLKEKVNTA
KGEVQVFESQLKILKQAETTESRKYETLKSSYEQSQKSLEEKVTRVDELK
ESIPRMKTEIASKSAEVDKMVKEERNLSMQCNKLRTEINERSSVMQAQRS
NNKVLDFLMRMKMEGKIPGILGRLGDLGGIDAKYDIAISTACGRLDNIVT
DNYETASAAIGALKEYNVGRATFITLDKIEHHRREANSRINTPENVPRLY
DLVKVEDDRVRTAFYFALRNTLVCDDLEQGTRIAYGRERYRVVTLRGEMI
EMTGTMSGGGSRPIRGKMGTQVRTKTAESADSSQISQKALEDMQIQAEEL
QARVNYCQEQQGSLEREIQTLKNGLQRDEAEYKRLAVSITSLEQQMASNL
KQCEAQRQRMLKKTTDERAVKEREEQIEAAKQELEQAQFAEQAVSSQIEE
IQNQYDTLRNESVKPVEAKIKKVNSQIEKLAANVRSLNVGLATADRNITK
ITGNNNNLRENIKAAEEKLKSLNEDRNKAKEKKEELEKEIEESEASIEGA
KSQSSDIKKEIDEITKEENKRNIERIEIDTKLQAAAGKMNKVKNDIPGWQ
AQLAPLKLNEIPGETEPQAPLKELNEEELEAETLEALQYKQTMLEEDLKT
KKPNLSCIKEFNEKRLVYLDRVRVLEDITSKRNEMRDKYEEVRKRRYKEF
MDGFSIITRKLKEMYQMITLGGDAELELVDSMDPFTEGVNFTVRPPKKSW
KYISNLSGGEKTLSSLALVFALHYYKPSPLYFMDEIDAALDFKNVSIVGH
YIKERTKNAQFIIVSLRVNMFELANFLVGIYKVSDCTDSITMLNYPPTLP
TQSPVVANSQYVGGTIEGDNTIAAENQDDTPTKKSQSPPSEQIVRLISEL
GRDTTFAPPLESTVRDTILAQNLKQAATEVAAQPSDATGRVTTDVSLASP
PSSPAILNV*

LD13578.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:09:32
Subject Length Description Subject Range Query Range Score Percent Strand
glu-PA 1409 CG11397-PA 1..1409 1..1409 7087 100 Plus
SMC1-PA 1238 CG6057-PA 34..1215 96..1280 896 25.7 Plus
SMC2-PA 1179 CG10212-PA 1..1154 87..1277 619 22.6 Plus
SMC3-PA 1200 CG9802-PA 3..1172 89..1280 571 22.3 Plus
zip-PH 1964 CG15792-PH 1076..1896 203..1027 308 20.3 Plus