BDGP Sequence Production Resources |
Search the DGRC for LD13628
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 136 |
Well: | 28 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG32579-RA |
Protein status: | LD13628.pep: gold |
Preliminary Size: | 1417 |
Sequenced Size: | 1273 |
Gene | Date | Evidence |
---|---|---|
CG32579 | 2005-08-08 | Manual selection by Mark Stapleton |
CG32579 | 2008-04-29 | Release 5.5 accounting |
CG32579 | 2008-04-29 | Picked prior to 5.5 |
CG32579 | 2008-08-15 | Release 5.9 accounting |
CG32579 | 2008-12-18 | 5.12 accounting |
1273 bp assembled on 2007-09-25
GenBank Submission: BT030989
> LD13628.complete CTAATCTTCAGTGTTTTGTTTTTTTTTTTTAGTCGAAAACCAGTGTCAGC AAGTTGAAGGCGAGAGTAGTTTGGAGGTCGAGGCCTTGGATATTTGTGTG TGGCTAGGGTGGCACATGTGCAATAAGGAGGCGGAGGAGACATGGCCTCC GCGGAGCAAAGAACCGAAGTGGACGCCCTTATGATGGGGCCGATCTCGAA ACTAAGCATGCTGCTCACTGTGGTGTCCATTCTGTGGCGCTTCGTCTCGA TTTGCATCAACTGGAGCCTGGCGTACGTGTACTGGATGGAGGAGTCCTAC GGATACTGCGCCTGGACCATTGGCTCCATTCTGGTGCCCATGGTGGTCAC ATCGGTCATATATATACATACCTTGAAGAGCGCTCATGCCGGCGAAAAAC GCATCCTGGAGCGAGGGGTGTACTCAAATGCTGTGATCTCATATCTCTTC CGCGATGTCTATGTCCTAAACTATGCGTTCAAATACTCGTTGGCCAAGGA GCGGGATGACAAGCAGGCGGAGATCGAATATTACCAAAAACTCATGACGG AGGAGTGCAATGTTAGTTTCGTTCGTCTATTCGACTCGTTTTTGGAATCA GCACCGCAGAAAATACTACAGCTGGCAATTCTTTTGCAATCGACATTGGA GTTCACATACTACCGCCACATCGCCCTGATCGTCTACTTCGGCAACATAG CGTGGTGCATCCAGGCGTACAATCACTCCAATCGCCTGGCCCAACTGGAC AAACATGATATTGCGGCGAAGGGACGATTTCTGCAATTTCTCTTCCTGCT CTGCCTCACTGTTTCGAGAACGCTTTGCATCGCGTATGTGGCCAGTATTT TTCCCATCGAAACGCTGATCATCTGCGCGACACTGGCTTGCTTTTACGGC ACCATTGTGTTCTTTGTGGACTCGCCAATGATCGCAAAATCCCGCCCCAT GAACTATTCGTACTGCCTGTGCTTTGGCGTTGTCTATCTATTTATTTTTA CGCCCGTCAAGGATGCACCAACCAAATATAAGTACGCCTTCTATCTCACA TTCTGTTTGTTGCAAAATATCATCGCCTGCGCTTTGTACATTCCCTTGTA TCTTGCCACAGCCATCATTGCCTTGTATATTGTCGGAATTGTTCTGTTAA TAATCTACTACACGTACTGCCATCCAAATACTGTGCGTACTTATTTTTAA AATTCTAGCATAATTAGTAGCATTTTGTATATTTGCAATAAACGTTGTTA TGCCCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 16214400..16214844 | 811..1255 | 2150 | 98.9 | Plus |
chrX | 22417052 | chrX | 16213052..16213421 | 1..371 | 1805 | 99.7 | Plus |
chrX | 22417052 | chrX | 16213498..16213653 | 372..527 | 780 | 100 | Plus |
chrX | 22417052 | chrX | 16214166..16214325 | 652..811 | 770 | 98.8 | Plus |
chrX | 22417052 | chrX | 16213803..16213933 | 528..658 | 655 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 16324676..16325121 | 811..1256 | 2230 | 100 | Plus |
X | 23542271 | X | 16323328..16323697 | 1..371 | 1805 | 99.7 | Plus |
X | 23542271 | X | 16323774..16323929 | 372..527 | 780 | 100 | Plus |
X | 23542271 | X | 16324442..16324601 | 652..811 | 770 | 98.8 | Plus |
X | 23542271 | X | 16324079..16324209 | 528..658 | 655 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 16332774..16333219 | 811..1256 | 2230 | 100 | Plus |
X | 23527363 | X | 16331426..16331795 | 1..371 | 1815 | 99.7 | Plus |
X | 23527363 | X | 16331872..16332027 | 372..527 | 780 | 100 | Plus |
X | 23527363 | X | 16332540..16332699 | 652..811 | 770 | 98.7 | Plus |
X | 23527363 | X | 16332177..16332307 | 528..658 | 655 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16213052..16213421 | 1..371 | 99 | -> | Plus |
chrX | 16213498..16213653 | 372..527 | 100 | -> | Plus |
chrX | 16213803..16213933 | 528..658 | 100 | -> | Plus |
chrX | 16214173..16214325 | 659..811 | 100 | -> | Plus |
chrX | 16214401..16214844 | 812..1255 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32579-RA | 1..1059 | 142..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32579-RA | 1..1059 | 142..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32579-RA | 1..1059 | 142..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32579-RA | 1..1059 | 142..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32579-RA | 1..1059 | 142..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32579-RA | 41..1294 | 1..1255 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32579-RA | 41..1294 | 1..1255 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32579-RA | 43..1296 | 1..1255 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32579-RA | 41..1294 | 1..1255 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32579-RA | 43..1296 | 1..1255 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16324449..16324601 | 659..811 | 100 | -> | Plus |
X | 16323328..16323697 | 1..371 | 99 | -> | Plus |
X | 16323774..16323929 | 372..527 | 100 | -> | Plus |
X | 16324079..16324209 | 528..658 | 100 | -> | Plus |
X | 16324677..16325120 | 812..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16324449..16324601 | 659..811 | 100 | -> | Plus |
X | 16323328..16323697 | 1..371 | 99 | -> | Plus |
X | 16323774..16323929 | 372..527 | 100 | -> | Plus |
X | 16324079..16324209 | 528..658 | 100 | -> | Plus |
X | 16324677..16325120 | 812..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16324449..16324601 | 659..811 | 100 | -> | Plus |
X | 16323328..16323697 | 1..371 | 99 | -> | Plus |
X | 16323774..16323929 | 372..527 | 100 | -> | Plus |
X | 16324079..16324209 | 528..658 | 100 | -> | Plus |
X | 16324677..16325120 | 812..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16217361..16217730 | 1..371 | 99 | -> | Plus |
arm_X | 16217807..16217962 | 372..527 | 100 | -> | Plus |
arm_X | 16218112..16218242 | 528..658 | 100 | -> | Plus |
arm_X | 16218482..16218634 | 659..811 | 100 | -> | Plus |
arm_X | 16218710..16219153 | 812..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16331426..16331795 | 1..371 | 99 | -> | Plus |
X | 16331872..16332027 | 372..527 | 100 | -> | Plus |
X | 16332177..16332307 | 528..658 | 100 | -> | Plus |
X | 16332547..16332699 | 659..811 | 100 | -> | Plus |
X | 16332775..16333218 | 812..1255 | 100 | Plus |
Translation from 141 to 1199
> LD13628.pep MASAEQRTEVDALMMGPISKLSMLLTVVSILWRFVSICINWSLAYVYWME ESYGYCAWTIGSILVPMVVTSVIYIHTLKSAHAGEKRILERGVYSNAVIS YLFRDVYVLNYAFKYSLAKERDDKQAEIEYYQKLMTEECNVSFVRLFDSF LESAPQKILQLAILLQSTLEFTYYRHIALIVYFGNIAWCIQAYNHSNRLA QLDKHDIAAKGRFLQFLFLLCLTVSRTLCIAYVASIFPIETLIICATLAC FYGTIVFFVDSPMIAKSRPMNYSYCLCFGVVYLFIFTPVKDAPTKYKYAF YLTFCLLQNIIACALYIPLYLATAIIALYIVGIVLLIIYYTYCHPNTVRT YF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17953-PA | 352 | GG17953-PA | 1..352 | 1..352 | 1603 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12280-PA | 353 | GH12280-PA | 1..353 | 1..352 | 909 | 49.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32579-PA | 352 | CG32579-PA | 1..352 | 1..352 | 1835 | 100 | Plus |
CG32579-PB | 359 | CG32579-PB | 1..359 | 1..352 | 1817 | 98.1 | Plus |
CG32579-PC | 237 | CG32579-PC | 1..223 | 1..223 | 1151 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10978-PA | 355 | GI10978-PA | 21..355 | 18..352 | 958 | 53.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21345-PA | 136 | GL21345-PA | 3..132 | 1..135 | 367 | 52.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23155-PA | 347 | GA23155-PA | 3..343 | 1..346 | 1190 | 65 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13425-PA | 284 | GM13425-PA | 12..284 | 80..352 | 1266 | 91.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17275-PA | 352 | GD17275-PA | 1..352 | 1..352 | 1671 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19443-PA | 347 | GJ19443-PA | 11..347 | 16..352 | 954 | 52.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25056-PA | 355 | GK25056-PA | 73..353 | 70..350 | 882 | 59.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17261-PA | 352 | GE17261-PA | 1..352 | 1..352 | 1629 | 90.6 | Plus |
Translation from 141 to 1199
> LD13628.hyp MASAEQRTEVDALMMGPISKLSMLLTVVSILWRFVSICINWSLAYVYWME ESYGYCAWTIGSILVPMVVTSVIYIHTLKSAHAGEKRILERGVYSNAVIS YLFRDVYVLNYAFKYSLAKERDDKQAEIEYYQKLMTEECNVSFVRLFDSF LESAPQKILQLAILLQSTLEFTYYRHIALIVYFGNIAWCIQAYNHSNRLA QLDKHDIAAKGRFLQFLFLLCLTVSRTLCIAYVASIFPIETLIICATLAC FYGTIVFFVDSPMIAKSRPMNYSYCLCFGVVYLFIFTPVKDAPTKYKYAF YLTFCLLQNIIACALYIPLYLATAIIALYIVGIVLLIIYYTYCHPNTVRT YF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32579-PA | 352 | CG32579-PA | 1..352 | 1..352 | 1835 | 100 | Plus |
CG32579-PB | 359 | CG32579-PB | 1..359 | 1..352 | 1817 | 98.1 | Plus |
CG32579-PC | 237 | CG32579-PC | 1..223 | 1..223 | 1151 | 100 | Plus |