BDGP Sequence Production Resources |
Search the DGRC for LD13649
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 136 |
Well: | 49 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG7997-RA |
Protein status: | LD13649.pep: gold |
Preliminary Size: | 1833 |
Sequenced Size: | 1743 |
Gene | Date | Evidence |
---|---|---|
CG7997 | 2001-01-01 | Release 2 assignment |
CG7997 | 2001-11-09 | Blastp of sequenced clone |
CG7997 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7997 | 2008-04-29 | Release 5.5 accounting |
CG7997 | 2008-08-15 | Release 5.9 accounting |
CG7997 | 2008-12-18 | 5.12 accounting |
1743 bp (1743 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069427
> LD13649.complete CTGTTCTCGGTCTCTCCTCGATTTTCTCTATTTGCTCCCTGTGATCGCTG TGAACTTGGCGTGATAAGGGGCTCCGGCTCCTCCTGCAATCGAGAAAGCC CGCTGTTTGCGCCACCCGGCGAACACCAATCAGTCGATGGGAGTACTCCG CTGCAATAGCAATTAGCCACTAACCTTCTGTCAGCTCTTCAGGTGCCATT CCCCTACCTCCAGCTCCTCAGGTGCCCCTGCCAAACAGAGTTATCTGGAG TGCCGCCCGCTGGAGAATATAAATTCCCTGGGTGCCCAAAGGCCAGGATT CAGTCGGTGCCACTAGCTCGCCATGTACGGAACGTGGGGCGTCTTTCTGG GCGGGATTCTTCTGCTGCAGGTTCTGCAATTATCCATGGGCCTCGATAAT GGCCTGGCACTAAAGCCACCTATGGGCTGGATGTCCTGGGAGCGATTCCG TTGCATCACCGACTGTAAACTGTATCCGGATGAGTGCATCAGTGAAAAAC TTTTCCAAAGACATGCGGATCTCCTGGTTTCTGAAGGATATGCGGATGCT GGCTACGAGTACGTCATCATAGATGACTGCTGGCTGGAGAAGAATCGCGA CAACGATACCCAGAAGCTGGTTCCGGACAGAAAGCGCTTTCCCAACGGCC TAAATGCTTTATCCGATCATATCCACAACCAGGGTCTGAAGTTTGGCTTG TATCAGGATTACGGCACCAACACCTGCGCTGGCTATCCCGGAGTGATCAA GCATATGAAGCTGGACGCCCAAACCTTTGCGGATTGGGATGTGGACTACG TGAAGCTGGACGGCTGTTATGCCAATATCAGCGACATGGCCTCGGGCTAT CCGGAGTTCGGACGCCTGCTCAATGAAACTGGTCGACCGATGGTATACTC CTGCAGTTGGCCCGCGTATCAGGAGGATGCAGGAGAAATGCCCGATTATG AGTCACTCAAGCAGCACTGTAATCTGTGGCGCAACTGGGACGACATCGAA GACTCGCTCGAGTCCCTTATGCAGATCATTGACTACTTTGCCAAGAATCA GGACAGGATTCAGCCGCATGGCGGACCAGGACATTGGAACGATCCAGATA TGCTGCTGCTGGGAAACTACGGCTTGAGCTACGATCAAAGCAAGCTGCAG ATGGCGATTTGGGCCATTATGGCAGCTCCTCTAATTATGTCCAATGATCT GGCTGCAGTGCGTCCCGAGATCAAGGCTATACTCCAGAATCGTGCGGTTA TTGCTGTGGACCAGGATGAGCTGGGCATCCAGGGGCGCCGTGTTTTGTCC CGCAACCAAATCGAAGTCTGGAAGCGTCCCATTACGCCAGTAACCAAGAG TGGACATCACTCCTATGCTGTCGCCTTTGTCAGTCGCCGAGATGATGGCG CTCCCTACAGGATCCCCTTCACGGTCAAGGAGCTCGGATTGACGAATCCC AAGGGTTATAATGTGCAGGATCTGTACGATGCCAGCAGCAAGTTGGGCGT CTTCCAGTCTGAGAGTCAGTTCATCACACGCGTCAATCCCAATGGCGTAA CTTTCTACAAGTTTACAGCGTTGTAAGCCCAAGATATGCAAATCAGCCGC TGCCATCAAATCGAATATGCTCTTATATACACACTATTTCCACATTGTCC ATTGACGTTGCATCGATGATCTGTGTAATAAGTTAATTCCGACAATAAAT ACCAGGTAATCACTGAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 12229144..12229715 | 1242..671 | 2800 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 12230394..12230808 | 415..1 | 2045 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 12228780..12229083 | 1545..1242 | 1505 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 12229777..12229958 | 670..489 | 910 | 100 | Minus |
chr2R | 21145070 | chr2R | 12228551..12228722 | 1715..1544 | 860 | 100 | Minus |
chr2R | 21145070 | chr2R | 12230023..12230071 | 492..444 | 245 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 16341844..16342415 | 1242..671 | 2860 | 100 | Minus |
2R | 25286936 | 2R | 16343094..16343508 | 415..1 | 2075 | 100 | Minus |
2R | 25286936 | 2R | 16341480..16341783 | 1545..1242 | 1520 | 100 | Minus |
2R | 25286936 | 2R | 16342477..16342658 | 670..489 | 910 | 100 | Minus |
2R | 25286936 | 2R | 16341249..16341422 | 1717..1544 | 870 | 100 | Minus |
2R | 25286936 | 2R | 16342723..16342771 | 492..444 | 245 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 16343043..16343614 | 1242..671 | 2860 | 100 | Minus |
2R | 25260384 | 2R | 16344293..16344707 | 415..1 | 2075 | 100 | Minus |
2R | 25260384 | 2R | 16342679..16342982 | 1545..1242 | 1520 | 100 | Minus |
2R | 25260384 | 2R | 16343676..16343857 | 670..489 | 910 | 100 | Minus |
2R | 25260384 | 2R | 16342448..16342621 | 1717..1544 | 870 | 100 | Minus |
2R | 25260384 | 2R | 16343922..16343970 | 492..444 | 245 | 100 | Minus |
2R | 25260384 | 2R | 16344205..16344234 | 444..415 | 150 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12230023..12230070 | 445..492 | 100 | <- | Minus |
chr2R | 12230306..12230335 | 415..444 | 100 | <- | Minus |
chr2R | 12228551..12228721 | 1545..1715 | 100 | <- | Minus |
chr2R | 12228781..12229082 | 1243..1544 | 99 | <- | Minus |
chr2R | 12229144..12229715 | 671..1242 | 99 | <- | Minus |
chr2R | 12229777..12229954 | 493..670 | 100 | <- | Minus |
chr2R | 12230395..12230808 | 1..414 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7997-RA | 1..1254 | 323..1576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7997-RB | 1..1254 | 323..1576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7997-RA | 1..1254 | 323..1576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7997-RB | 1..1254 | 323..1576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7997-RA | 51..1765 | 1..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7997-RA | 51..1765 | 1..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7997-RA | 15..1729 | 1..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7997-RA | 51..1765 | 1..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7997-RA | 15..1729 | 1..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16341251..16341421 | 1545..1715 | 100 | <- | Minus |
2R | 16341481..16341782 | 1243..1544 | 100 | <- | Minus |
2R | 16341844..16342415 | 671..1242 | 100 | <- | Minus |
2R | 16342477..16342654 | 493..670 | 100 | <- | Minus |
2R | 16342723..16342770 | 445..492 | 100 | <- | Minus |
2R | 16343006..16343035 | 415..444 | 100 | <- | Minus |
2R | 16343095..16343508 | 1..414 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16341251..16341421 | 1545..1715 | 100 | <- | Minus |
2R | 16341481..16341782 | 1243..1544 | 100 | <- | Minus |
2R | 16341844..16342415 | 671..1242 | 100 | <- | Minus |
2R | 16342477..16342654 | 493..670 | 100 | <- | Minus |
2R | 16342723..16342770 | 445..492 | 100 | <- | Minus |
2R | 16343006..16343035 | 415..444 | 100 | <- | Minus |
2R | 16343095..16343508 | 1..414 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16341251..16341421 | 1545..1715 | 100 | <- | Minus |
2R | 16341481..16341782 | 1243..1544 | 100 | <- | Minus |
2R | 16341844..16342415 | 671..1242 | 100 | <- | Minus |
2R | 16342477..16342654 | 493..670 | 100 | <- | Minus |
2R | 16342723..16342770 | 445..492 | 100 | <- | Minus |
2R | 16343006..16343035 | 415..444 | 100 | <- | Minus |
2R | 16343095..16343508 | 1..414 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12228756..12228926 | 1545..1715 | 100 | <- | Minus |
arm_2R | 12228986..12229287 | 1243..1544 | 100 | <- | Minus |
arm_2R | 12229349..12229920 | 671..1242 | 100 | <- | Minus |
arm_2R | 12229982..12230159 | 493..670 | 100 | <- | Minus |
arm_2R | 12230228..12230275 | 445..492 | 100 | <- | Minus |
arm_2R | 12230511..12230540 | 415..444 | 100 | <- | Minus |
arm_2R | 12230600..12231013 | 1..414 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16342680..16342981 | 1243..1544 | 100 | <- | Minus |
2R | 16343043..16343614 | 671..1242 | 100 | <- | Minus |
2R | 16343676..16343853 | 493..670 | 100 | <- | Minus |
2R | 16343922..16343969 | 445..492 | 100 | <- | Minus |
2R | 16344205..16344234 | 415..444 | 100 | <- | Minus |
2R | 16344294..16344707 | 1..414 | 100 | Minus | |
2R | 16342450..16342620 | 1545..1715 | 100 | <- | Minus |
Translation from 322 to 1575
> LD13649.pep MYGTWGVFLGGILLLQVLQLSMGLDNGLALKPPMGWMSWERFRCITDCKL YPDECISEKLFQRHADLLVSEGYADAGYEYVIIDDCWLEKNRDNDTQKLV PDRKRFPNGLNALSDHIHNQGLKFGLYQDYGTNTCAGYPGVIKHMKLDAQ TFADWDVDYVKLDGCYANISDMASGYPEFGRLLNETGRPMVYSCSWPAYQ EDAGEMPDYESLKQHCNLWRNWDDIEDSLESLMQIIDYFAKNQDRIQPHG GPGHWNDPDMLLLGNYGLSYDQSKLQMAIWAIMAAPLIMSNDLAAVRPEI KAILQNRAVIAVDQDELGIQGRRVLSRNQIEVWKRPITPVTKSGHHSYAV AFVSRRDDGAPYRIPFTVKELGLTNPKGYNVQDLYDASSKLGVFQSESQF ITRVNPNGVTFYKFTAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11268-PA | 417 | GF11268-PA | 1..417 | 1..417 | 1944 | 87.5 | Plus |
Dana\GF14131-PA | 413 | GF14131-PA | 7..404 | 13..413 | 1319 | 60.1 | Plus |
Dana\GF23088-PA | 419 | GF23088-PA | 21..416 | 23..417 | 1232 | 55.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22272-PA | 417 | GG22272-PA | 1..417 | 1..417 | 2186 | 96.6 | Plus |
Dere\GG23972-PA | 413 | GG23972-PA | 7..404 | 13..413 | 1314 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21921-PA | 411 | GH21921-PA | 19..411 | 25..417 | 1765 | 80.9 | Plus |
Dgri\GH13861-PA | 413 | GH13861-PA | 18..404 | 24..413 | 1309 | 61.8 | Plus |
Dgri\GH20142-PA | 405 | GH20142-PA | 4..401 | 12..416 | 1110 | 53.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7997-PA | 417 | CG7997-PA | 1..417 | 1..417 | 2262 | 100 | Plus |
CG7997-PB | 417 | CG7997-PB | 1..417 | 1..417 | 2262 | 100 | Plus |
CG5731-PA | 413 | CG5731-PA | 18..404 | 24..413 | 1320 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19628-PA | 417 | GI19628-PA | 23..417 | 23..417 | 1701 | 78.3 | Plus |
Dmoj\GI19627-PA | 413 | GI19627-PA | 23..413 | 23..417 | 1662 | 76.2 | Plus |
Dmoj\GI17617-PA | 413 | GI17617-PA | 5..404 | 12..413 | 1295 | 59.3 | Plus |
Dmoj\GI24374-PA | 423 | GI24374-PA | 25..417 | 23..414 | 1233 | 57.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11348-PA | 427 | GL11348-PA | 1..427 | 1..417 | 1868 | 82.9 | Plus |
Dper\GL18985-PA | 411 | GL18985-PA | 7..404 | 13..413 | 1296 | 58.9 | Plus |
Dper\GL12300-PA | 424 | GL12300-PA | 26..420 | 23..416 | 1245 | 57.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20753-PA | 417 | GA20753-PA | 25..417 | 25..417 | 1878 | 86.5 | Plus |
Dpse\GA27712-PA | 411 | GA27712-PA | 7..404 | 13..413 | 1299 | 58.6 | Plus |
Dpse\GA26269-PA | 424 | GA26269-PA | 15..420 | 12..416 | 1238 | 55.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20062-PA | 417 | GM20062-PA | 1..417 | 1..417 | 2205 | 97.1 | Plus |
Dsec\GM11946-PA | 413 | GM11946-PA | 7..404 | 13..413 | 1314 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25544-PA | 417 | GD25544-PA | 1..417 | 1..417 | 2218 | 98.1 | Plus |
Dsim\GD22296-PA | 413 | GD22296-PA | 7..404 | 13..413 | 1314 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14995-PA | 419 | GJ14995-PA | 24..417 | 23..417 | 1809 | 83 | Plus |
Dvir\GJ18121-PA | 409 | GJ18121-PA | 2..404 | 9..413 | 1306 | 60.1 | Plus |
Dvir\GJ24381-PA | 443 | GJ24381-PA | 17..440 | 23..417 | 1217 | 54.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21691-PA | 417 | GK21691-PA | 5..417 | 9..417 | 1825 | 80.1 | Plus |
Dwil\GK15268-PA | 412 | GK15268-PA | 11..404 | 17..413 | 1292 | 59.2 | Plus |
Dwil\GK12921-PA | 424 | GK12921-PA | 26..421 | 23..417 | 1247 | 56 | Plus |
Translation from 322 to 1575
> LD13649.hyp MYGTWGVFLGGILLLQVLQLSMGLDNGLALKPPMGWMSWERFRCITDCKL YPDECISEKLFQRHADLLVSEGYADAGYEYVIIDDCWLEKNRDNDTQKLV PDRKRFPNGLNALSDHIHNQGLKFGLYQDYGTNTCAGYPGVIKHMKLDAQ TFADWDVDYVKLDGCYANISDMASGYPEFGRLLNETGRPMVYSCSWPAYQ EDAGEMPDYESLKQHCNLWRNWDDIEDSLESLMQIIDYFAKNQDRIQPHG GPGHWNDPDMLLLGNYGLSYDQSKLQMAIWAIMAAPLIMSNDLAAVRPEI KAILQNRAVIAVDQDELGIQGRRVLSRNQIEVWKRPITPVTKSGHHSYAV AFVSRRDDGAPYRIPFTVKELGLTNPKGYNVQDLYDASSKLGVFQSESQF ITRVNPNGVTFYKFTAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7997-PA | 417 | CG7997-PA | 1..417 | 1..417 | 2262 | 100 | Plus |
CG7997-PB | 417 | CG7997-PB | 1..417 | 1..417 | 2262 | 100 | Plus |
CG5731-PA | 413 | CG5731-PA | 18..404 | 24..413 | 1320 | 61.8 | Plus |