BDGP Sequence Production Resources |
Search the DGRC for LD13710
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 137 |
Well: | 10 |
Vector: | pBS SK- |
Associated Gene/Transcript | nesd-RA |
Protein status: | LD13710.pep: gold |
Preliminary Size: | 2042 |
Sequenced Size: | 1934 |
Gene | Date | Evidence |
---|---|---|
CG10722 | 2001-01-01 | Release 2 assignment |
CG10722 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10722 | 2003-03-27 | Blastp of sequenced clone |
CG10722 | 2008-04-29 | Release 5.5 accounting |
CG10722 | 2008-08-15 | Release 5.9 accounting |
CG10722 | 2008-12-18 | 5.12 accounting |
1934 bp (1934 high quality bases) assembled on 2003-03-27
GenBank Submission: BT011118
> LD13710.complete TTCATTCAAAAGGGGAAAATGGAAGTGTTTACCTTTGAGAAATCGTACTT GGAGCGCCTAAAAGAAGCGGAGGCGGTGCTTTCGTGGGAGGGAGCCGTGA TGCCCGCATCCCAGGTTCGATCCGAGTGGAAATCCTACGTCGAATTAAAA ATTGAGCCTGCAGGATGGCAGGCAATTTGGAAAATTCCACGCGTTATTTG CGAGGATCTGAAACTACGCTATCCCACCATTGTTTACGGCTACGTGGAGC AGGTGATCTTTGACGAGCTCAAGGCGGTATTTGTGGTGACCGCCGTGCAG GATAGCGATGTCCACCTGCCGGAGAGTAATGAAGTATCGCTAGTGGAGCT GTGGCCCACTGTGCAGCAGGAGAACGCAGCTCTAAATGTGGATACCACCG CTGAATGCATCGATCGTTTGCGGTTCTTCTATACGCATGTGTGGATGCCT TGGGACAAGGACTACGACGATGATCGCGACTGGGTGCAACAGCATCTGCA GGCTCGTATCCAACTAGTGTGCGATCTCAGCAAGAACCGACTGCCCCGTC CGTTGGCCCTGCACATGCGCACCCTGCTCGCCGAAGCCAAATACATTCAG CAGCGTCTGGACTACTTGGAACTGGATCTCAGTGATGCCGAGAGCGACGA CGAGGCTGTGGAACTCAATGACAGCGTAGCAGAGCCCGCTAGAAAGCAAT CTAAAGCGGGCAGTGCCAATGGCTGTCTCAATGTGTCCAGTCTGCCGGTT ACAGATCTGATGTGCCTGCACCTGCGCATGGCCATCATAAGGAGCGAGTT CGAGATCCTTGAAAATCCTGAAATGAGGCGAGCCTACAGCGAGCTACAGT CTAATAGCCTCAAGCGGCTTCGCTGCTCCTCAGGAAGAACCAGACAATCG GAGGATCTCTTGGTAGAGCGGAATTCCATAAGCCATGTGGTAACCTTGCC GGGAAAACTGCAGCAGCAGCTGGAACTGCTAAAGCTGGCCCAGACGCTGG TCAAGCCGGAATCGAAAGTGCAGCTGTCCAATACGTTGCAGGATGTCCTG AGCATCTGTCAGAGCAACGATGATATTCTACTTTCGCCCGGCGAGCATAC AATCAAATTCTTGGAGCACCTCAACGATAATGGCAGCCTAAGGGGACTCA CTCAGCCGGAAGCCATACTAAGTCCTGCTGCAGATCTTTCCCTGCTGCCT GTGGTGTGCTCGAGCGATGAGGATAGCACCCTGCTGGTCATTGATGGCGA CTATACCTTGTCGGAATTGGTTTTGGATTGTCGTCATGTCCGTAGAGGGA TCCTGCTGCGCAACGGAACGTTGACCATGCGAGGGTGTCGCTTGCTGGGC GATGGGAGCTCCAGCACCCAAGAGGGTATTGTCTGCATGCCAGGCGCCAG CGTGGAACTCAAAAGTTGCCTAATTGAAAACTTTGCTGTGGGTGTATCGA TGCGACCGAAATCTAGTGCTGAGCTGGGAAGCGTCCAGTTTAAAACATGC AAGACTGGACTGGAGTTGCTGGAGAAATCCGCTTCGGTTAATCTGCAGGG TAGCAAGTGCAGTTTTGAAAACTGTGCTTTAGGAATCCTGGCCGATGGTT TCGTATTGGGAGAGCAAAGAACAGAGAAGGTCCTGGTTCTAAACAAATTC AGCGAACTTCAGCGTTACAACGAGGACAACTTGCTAGGTAATTGCAGCTT TTACAACTGCAAGAAAAATGTGCGAGTTTTTAACGAATCCGGTCAGCTGC TGGCTCAGCGATCGCATCAACAACTCCTCGAGGACGAACTCGGAGGGGAG AACAAGGAAAATATTCAATTGGTCTAGGGGTACATTGTGTACACATAGTG TTTATAAATTAAAATTTAGCGCTAACCGAAAATCCTATTGATATGCGTCA ATAAATAATACGGGCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 20092846..20094348 | 162..1664 | 7455 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 20094411..20094662 | 1664..1915 | 1215 | 98.8 | Plus |
chr2L | 23010047 | chr2L | 20092600..20092763 | 1..164 | 820 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20094437..20095939 | 162..1664 | 7515 | 100 | Plus |
2L | 23513712 | 2L | 20096002..20096256 | 1664..1918 | 1275 | 100 | Plus |
2L | 23513712 | 2L | 20094191..20094354 | 1..164 | 820 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20094437..20095939 | 162..1664 | 7515 | 100 | Plus |
2L | 23513712 | 2L | 20096002..20096256 | 1664..1918 | 1275 | 100 | Plus |
2L | 23513712 | 2L | 20094191..20094354 | 1..164 | 820 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 20092600..20092762 | 1..163 | 100 | -> | Plus |
chr2L | 20092848..20094348 | 164..1664 | 99 | -> | Plus |
chr2L | 20094412..20094662 | 1665..1915 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10722-RA | 1..1809 | 19..1827 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10722-RA | 1..1809 | 19..1827 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nesd-RB | 1..1809 | 19..1827 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10722-RA | 1..1809 | 19..1827 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nesd-RB | 1..1809 | 19..1827 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10722-RA | 228..2142 | 1..1915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10722-RA | 228..2142 | 1..1915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nesd-RB | 97..2011 | 1..1915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10722-RA | 228..2142 | 1..1915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nesd-RB | 97..2011 | 1..1915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20094191..20094353 | 1..163 | 100 | -> | Plus |
2L | 20094439..20095939 | 164..1664 | 100 | -> | Plus |
2L | 20096003..20096253 | 1665..1915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20094191..20094353 | 1..163 | 100 | -> | Plus |
2L | 20094439..20095939 | 164..1664 | 100 | -> | Plus |
2L | 20096003..20096253 | 1665..1915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20094191..20094353 | 1..163 | 100 | -> | Plus |
2L | 20094439..20095939 | 164..1664 | 100 | -> | Plus |
2L | 20096003..20096253 | 1665..1915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 20094191..20094353 | 1..163 | 100 | -> | Plus |
arm_2L | 20094439..20095939 | 164..1664 | 100 | -> | Plus |
arm_2L | 20096003..20096253 | 1665..1915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20094439..20095939 | 164..1664 | 100 | -> | Plus |
2L | 20096003..20096253 | 1665..1915 | 100 | Plus | |
2L | 20094191..20094353 | 1..163 | 100 | -> | Plus |
Translation from 0 to 1826
> LD13710.hyp FIQKGKMEVFTFEKSYLERLKEAEAVLSWEGAVMPASQVRSEWKSYVELK IEPAGWQAIWKIPRVICEDLKLRYPTIVYGYVEQVIFDELKAVFVVTAVQ DSDVHLPESNEVSLVELWPTVQQENAALNVDTTAECIDRLRFFYTHVWMP WDKDYDDDRDWVQQHLQARIQLVCDLSKNRLPRPLALHMRTLLAEAKYIQ QRLDYLELDLSDAESDDEAVELNDSVAEPARKQSKAGSANGCLNVSSLPV TDLMCLHLRMAIIRSEFEILENPEMRRAYSELQSNSLKRLRCSSGRTRQS EDLLVERNSISHVVTLPGKLQQQLELLKLAQTLVKPESKVQLSNTLQDVL SICQSNDDILLSPGEHTIKFLEHLNDNGSLRGLTQPEAILSPAADLSLLP VVCSSDEDSTLLVIDGDYTLSELVLDCRHVRRGILLRNGTLTMRGCRLLG DGSSSTQEGIVCMPGASVELKSCLIENFAVGVSMRPKSSAELGSVQFKTC KTGLELLEKSASVNLQGSKCSFENCALGILADGFVLGEQRTEKVLVLNKF SELQRYNEDNLLGNCSFYNCKKNVRVFNESGQLLAQRSHQQLLEDELGGE NKENIQLV*
Translation from 18 to 1826
> LD13710.pep MEVFTFEKSYLERLKEAEAVLSWEGAVMPASQVRSEWKSYVELKIEPAGW QAIWKIPRVICEDLKLRYPTIVYGYVEQVIFDELKAVFVVTAVQDSDVHL PESNEVSLVELWPTVQQENAALNVDTTAECIDRLRFFYTHVWMPWDKDYD DDRDWVQQHLQARIQLVCDLSKNRLPRPLALHMRTLLAEAKYIQQRLDYL ELDLSDAESDDEAVELNDSVAEPARKQSKAGSANGCLNVSSLPVTDLMCL HLRMAIIRSEFEILENPEMRRAYSELQSNSLKRLRCSSGRTRQSEDLLVE RNSISHVVTLPGKLQQQLELLKLAQTLVKPESKVQLSNTLQDVLSICQSN DDILLSPGEHTIKFLEHLNDNGSLRGLTQPEAILSPAADLSLLPVVCSSD EDSTLLVIDGDYTLSELVLDCRHVRRGILLRNGTLTMRGCRLLGDGSSST QEGIVCMPGASVELKSCLIENFAVGVSMRPKSSAELGSVQFKTCKTGLEL LEKSASVNLQGSKCSFENCALGILADGFVLGEQRTEKVLVLNKFSELQRY NEDNLLGNCSFYNCKKNVRVFNESGQLLAQRSHQQLLEDELGGENKENIQ LV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15454-PA | 604 | GF15454-PA | 1..604 | 1..602 | 2553 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21222-PA | 602 | GG21222-PA | 1..602 | 1..602 | 2888 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13238-PA | 602 | GH13238-PA | 1..601 | 1..599 | 2229 | 70.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nesd-PA | 602 | CG10722-PA | 1..602 | 1..602 | 3082 | 100 | Plus |
nesd-PB | 602 | CG10722-PB | 1..602 | 1..602 | 3082 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12495-PA | 604 | GI12495-PA | 1..603 | 1..599 | 2309 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26670-PA | 603 | GL26670-PA | 1..600 | 1..599 | 2510 | 80.2 | Plus |
Dper\GL15104-PA | 200 | GL15104-PA | 1..191 | 1..191 | 907 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10522-PA | 603 | GA10522-PA | 1..600 | 1..599 | 2513 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17393-PA | 602 | GM17393-PA | 1..602 | 1..602 | 3096 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24245-PA | 466 | GD24245-PA | 154..466 | 290..602 | 1612 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17888-PA | 604 | GJ17888-PA | 1..603 | 1..599 | 2333 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23804-PA | 602 | GK23804-PA | 1..585 | 1..583 | 2092 | 68.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13297-PA | 602 | GE13297-PA | 1..601 | 1..601 | 2972 | 94 | Plus |