BDGP Sequence Production Resources |
Search the DGRC for LD13807
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 138 |
Well: | 7 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG3226-RA |
Protein status: | LD13807.pep: gold |
Preliminary Size: | 1025 |
Sequenced Size: | 851 |
Gene | Date | Evidence |
---|---|---|
CG3226 | 2001-01-01 | Release 2 assignment |
CG3226 | 2001-10-10 | Blastp of sequenced clone |
CG3226 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3226 | 2008-04-29 | Release 5.5 accounting |
CG3226 | 2008-08-15 | Release 5.9 accounting |
CG3226 | 2008-12-18 | 5.12 accounting |
851 bp (851 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061170
> LD13807.complete ATCAACTGTTATTCAGACAAAACAAAATGTCATTGGAACAGCTGAAAAGC GATGTGGCCGAGCTGGCGGCCTTCCTGCAGCAGGCGAAAGGTGCCCGCGT AAAAGACGTGCTGACCACCGCTAAAGCGGAGGCGGAACGGGAGATTGTCA ATCTGGAGTTGAAGGCCAAAATTGCGGCAGAGCGACAGGCCACCGGGTCG AGCGAAGCCAAGAGATATCTGCACGAGCTGACCGACTACGGCTGGGACCA GAGCGCCAAGTTCGTGAAGCTCTTCATCACCTTGAACGGAGTGCAGGGCT GCACGGAGGAGAATGTGACAGTCACCTACACACCTAACTCGTTGCAGCTC CATGTGCGCGATCTTCAGGGCAAGGACTTTGGGCTGACCGTAAACAATCT GCTGCACAGTATCGATGTGGAGAAGAGCTACCGAAAGATCAAGACCGACA TGGTGGCCATCTATCTGCAGAAGGTTGAGGACAAGCACTGGGATGTGCTC ACCGCTATCCAGAAGCGTTTGAAGCAAAAGAAGGACAGCGAATTGTCCAA AGATGGCGACAATCCCGAATCGGCGCTTGTTAACATCATGAAGAAGATGT ACAACGACGGTGACTCCAAGACGAAGCAGATGATCGCCAAAGCTTGGACC GAGAGTCAGGATAAGGCGAAGCTTGGCAAGGAGACGGGCGGCGGATTGGA TTCTTTCGACGATCTTTAGATATGATAATAACCACACCCATTCGCGAATT AGCTAACTACCTAAGGCACTGCTTCGATTCCAGCACAATTTGTATATGTG GATAAATAAACTCCCAGCTAGGGCATTAAGTTAAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3226-RA | 1205 | CG3226-RA | 357..1192 | 1..836 | 4180 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6545367..6545984 | 832..213 | 2975 | 99 | Minus |
chrX | 22417052 | chrX | 6546160..6546336 | 214..38 | 870 | 99.4 | Minus |
chrX | 22417052 | chrX | 6546398..6546438 | 41..1 | 205 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6545367..6545982 | 215..832 | 99 | <- | Minus |
chrX | 6546160..6546332 | 42..214 | 99 | <- | Minus |
chrX | 6546398..6546438 | 1..41 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3226-RA | 1..693 | 27..719 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3226-RA | 1..693 | 27..719 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3226-RA | 1..693 | 27..719 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3226-RA | 1..693 | 27..719 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3226-RA | 1..693 | 27..719 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3226-RA | 1..832 | 1..832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3226-RA | 1..832 | 1..832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3226-RA | 63..894 | 1..832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3226-RA | 1..832 | 1..832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3226-RA | 63..894 | 1..832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6653113..6653730 | 215..832 | 100 | <- | Minus |
X | 6653908..6654080 | 42..214 | 100 | <- | Minus |
X | 6654146..6654186 | 1..41 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6653113..6653730 | 215..832 | 100 | <- | Minus |
X | 6653908..6654080 | 42..214 | 100 | <- | Minus |
X | 6654146..6654186 | 1..41 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6653113..6653730 | 215..832 | 100 | <- | Minus |
X | 6653908..6654080 | 42..214 | 100 | <- | Minus |
X | 6654146..6654186 | 1..41 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6547146..6547763 | 215..832 | 100 | <- | Minus |
arm_X | 6547941..6548113 | 42..214 | 100 | <- | Minus |
arm_X | 6548179..6548219 | 1..41 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6661211..6661828 | 215..832 | 100 | <- | Minus |
X | 6662006..6662178 | 42..214 | 100 | <- | Minus |
X | 6662244..6662284 | 1..41 | 100 | Minus |
Translation from 2 to 718
> LD13807.hyp QLLFRQNKMSLEQLKSDVAELAAFLQQAKGARVKDVLTTAKAEAEREIVN LELKAKIAAERQATGSSEAKRYLHELTDYGWDQSAKFVKLFITLNGVQGC TEENVTVTYTPNSLQLHVRDLQGKDFGLTVNNLLHSIDVEKSYRKIKTDM VAIYLQKVEDKHWDVLTAIQKRLKQKKDSELSKDGDNPESALVNIMKKMY NDGDSKTKQMIAKAWTESQDKAKLGKETGGGLDSFDDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3226-PA | 230 | CG3226-PA | 1..230 | 9..238 | 1163 | 100 | Plus |
Translation from 26 to 718
> LD13807.pep MSLEQLKSDVAELAAFLQQAKGARVKDVLTTAKAEAEREIVNLELKAKIA AERQATGSSEAKRYLHELTDYGWDQSAKFVKLFITLNGVQGCTEENVTVT YTPNSLQLHVRDLQGKDFGLTVNNLLHSIDVEKSYRKIKTDMVAIYLQKV EDKHWDVLTAIQKRLKQKKDSELSKDGDNPESALVNIMKKMYNDGDSKTK QMIAKAWTESQDKAKLGKETGGGLDSFDDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21900-PA | 230 | GF21900-PA | 1..230 | 1..230 | 864 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17668-PA | 231 | GG17668-PA | 1..231 | 1..230 | 1115 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24241-PA | 229 | GH24241-PA | 1..222 | 1..222 | 862 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3226-PA | 230 | CG3226-PA | 1..230 | 1..230 | 1163 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21437-PA | 225 | GI21437-PA | 1..221 | 1..222 | 881 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13373-PA | 231 | GL13373-PA | 1..231 | 1..230 | 1003 | 81 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16794-PA | 231 | GA16794-PA | 1..231 | 1..230 | 998 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12568-PA | 231 | GM12568-PA | 1..231 | 1..230 | 1130 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16188-PA | 231 | GD16188-PA | 1..231 | 1..230 | 1127 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16455-PA | 228 | GJ16455-PA | 1..228 | 1..230 | 897 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25346-PA | 232 | GK25346-PA | 1..221 | 1..219 | 929 | 81 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16458-PA | 231 | GE16458-PA | 1..231 | 1..230 | 1114 | 92.2 | Plus |