BDGP Sequence Production Resources |
Search the DGRC for LD13846
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 138 |
Well: | 46 |
Vector: | pBS SK- |
Associated Gene/Transcript | l(1)G0334-RB |
Protein status: | LD13846.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1980 |
Gene | Date | Evidence |
---|---|---|
CG7010 | 2001-01-01 | Release 2 assignment |
CG7010 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7010 | 2003-05-20 | Blastp of sequenced clone |
l(1)G0334 | 2008-04-29 | Release 5.5 accounting |
l(1)G0334 | 2008-08-15 | Release 5.9 accounting |
l(1)G0334 | 2008-12-18 | 5.12 accounting |
1980 bp (1980 high quality bases) assembled on 2003-05-20
GenBank Submission: BT010068
> LD13846.complete TGATAAACTAATCTCGCTACCTTTTTTTCCGATTGTTTAACTTACAACGA CGCGCGGCGGTGCGACTGAGACACCAGATATATAGCGTGCGATTCTAGAT CCGGACAATCCGCATATAGAAAGCCCCCATTCACATCCAATTTCTGTCAG TCGAACGAGAATAACACAGCGAAAATGTTGCGTACTCTGTCACGCGTTAG CGAATTGCCCATTATTGTTAAGCAACTGCAAAAAGTACGTAATCCCAATC CCGCTTTGCACCCACTAACATTTCTAATTGTTGTCACTAAAAATGCAATT GAACAAATCCATTCGATAATGAAAACACTAAAAGCGTTGCCATAACAACA ACAACAACAACATCATCATCAGCGGATGTCGGATACTTAGCAACAACAAC AACAACAGCAGCATCGATATCATCAGGAATGGGAGATATTCATCGTCGTT TTTCGGTTTATTCCAGAATGCAGCCCAAGCAGGTGTTTCGAAAACCAACA ATTATGCCACGGAGGCCACCGTTCAAGTGAATCGGCCCTTCAAGCTGCAC CGCCTGGACGAAGGACCCGCCACGGAAGTGAAGCTGACCAAGGATCAGGC CCTCAAGTACTACACACAGATGCAGACGATCCGTCGGTTGGAGACGGCCG CCGGTAATCTGTACAAGGAGAAGATCATTCGCGGCTTCTGTCATCTGTAT TCCGGCCAGGAGGCATGCGCCGTTGGCATGAAGGCGGCGATGCGGGATGT GGACAACATCATCTCGGCGTACCGTGTCCACGGATGGACCTACCTGATGG GCGTCTCACCCAGCGGCGTACTGGCTGAGCTCACCGGTGTCCAGGGTGGC TGTGCCCGCGGCAAGGGTGGCTCCATGCACATGTACGCACCGAACTTCTA CGGAGGCAATGGCATCGTGGGTGCTCAAGTTCCTTTGGGTGCCGGCGTTG GCTTGGCCTGCAAGTACAAGGGCAATGGCGGCATGTGCCTGGCCCTCTAC GGTGATGGTGCCGCCAATCAAGGACAGGTGTTCGAGGCTTACAACATGGC CTACCTGTGGAAACTGCCTGTGATCTTTGTCTGCGAGAACAACAACTACG GAATGGGCACCAGTTCTGAGCGTGCTTCCTGCAACACTGATTACTATACC CGCGGCGACGCTCTGCCCGGAATCTGGGTGGACGGCATGGATGTGCTGGC CGTGCGCAGCGCCACCGAGTTCGCCATCAACTATGTGAACACTCACGGAC CTTTGGTGATGGAGACGAACACGTACCGATACTCTGGACACTCCATGTCC GATCCGGGCACATCGTACCGCACACGCGAGGAGATCCAGGAGGTGCGCCA GAAGCGTGATCCCATCACCTCCTTCAAGGAGCTGTGCATCGAGCTGGGTC TGATTACCACCGATGAAGTTAAGGCCATCGATCTGAAGGTACGCAAGGAG GTCGACGAGGCCACCGCCTTCGCCAAGTCCGATGCCGAGCTGGGCGTGAG CCACCTCTGGACGGACGTGTACTCCAACAATCTGGAGCCCAAGCTGCGCG GCACCATCGCCTACGATATTGATCACATCCAGGAGCGCAAGGGCGTCAAT CACTAAGTCATCGGGCCAACGAATCTGATTCGGGAACTCACAAGAACCTT AAACGAAACAAGAAAACCGAACAGCAAACACAAATCACTGACAGACAGAC AAGAAGACACAATAACTCAGAAACTTGGACACAAGCGAAATCTCTAGATC ATAAGCCGAAAGTTGAACGATGAGAACCCCGTAGAACGGAACGGATCCGA AGAGACCCACAAAAAGCTTAGCTAATCGGAGCACTCCAACCACACATCGT AGCGCACCACATAACTCTGGGGTACTGCATTGGATATTATATTGCGAACG TGTTCAATAAGGATAAAGCGAGGTGTAAATTGTTGAAAATATAAAAATCT AGAAAAATTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0334-RB | 2024 | l(1)G0334-RB | 59..2019 | 1..1961 | 9805 | 100 | Plus |
l(1)G0334-RC | 2048 | l(1)G0334-RC | 304..1935 | 330..1961 | 8145 | 99.9 | Plus |
l(1)G0334-RA | 1939 | l(1)G0334-RA | 321..1815 | 467..1961 | 7475 | 100 | Plus |
l(1)G0334-RC | 2048 | l(1)G0334-RC | 75..308 | 1..234 | 1170 | 100 | Plus |
l(1)G0334-RA | 1939 | l(1)G0334-RA | 87..320 | 1..234 | 1170 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 4596337..4596903 | 535..1101 | 2760 | 99.1 | Plus |
chrX | 22417052 | chrX | 4597369..4597906 | 1422..1959 | 2690 | 100 | Plus |
chrX | 22417052 | chrX | 4595146..4595675 | 1..535 | 2490 | 98.5 | Plus |
chrX | 22417052 | chrX | 4596977..4597301 | 1100..1424 | 1610 | 99.7 | Plus |
chrX | 22417052 | chrX | 4599247..4599578 | 990..1321 | 265 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 4703554..4704120 | 535..1101 | 2835 | 100 | Plus |
X | 23542271 | X | 4704586..4705125 | 1422..1961 | 2700 | 100 | Plus |
X | 23542271 | X | 4702358..4702892 | 1..535 | 2675 | 100 | Plus |
X | 23542271 | X | 4704194..4704518 | 1100..1424 | 1625 | 100 | Plus |
X | 23542271 | X | 4706459..4706790 | 990..1321 | 265 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 4711652..4712218 | 535..1101 | 2835 | 100 | Plus |
X | 23527363 | X | 4712684..4713223 | 1422..1961 | 2700 | 100 | Plus |
X | 23527363 | X | 4710456..4710990 | 1..535 | 2675 | 100 | Plus |
X | 23527363 | X | 4712292..4712616 | 1100..1424 | 1625 | 100 | Plus |
X | 23527363 | X | 4714557..4714627 | 990..1060 | 160 | 81.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 4595146..4595487 | 1..341 | 99 | == | Plus |
chrX | 4595566..4595675 | 426..535 | 100 | -> | Plus |
chrX | 4596338..4596902 | 536..1100 | 99 | -> | Plus |
chrX | 4596978..4597300 | 1101..1423 | 99 | -> | Plus |
chrX | 4597371..4597906 | 1424..1959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RC | 56..1332 | 330..1606 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RC | 56..1332 | 330..1606 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RC | 56..1332 | 330..1606 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RC | 56..1332 | 330..1606 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RC | 56..1332 | 330..1606 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RB | 1..1957 | 3..1959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RB | 1..1957 | 3..1959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RB | 34..1992 | 1..1959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RB | 1..1957 | 3..1959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RB | 34..1992 | 1..1959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4702358..4702892 | 1..535 | 100 | -> | Plus |
X | 4703555..4704119 | 536..1100 | 100 | -> | Plus |
X | 4704195..4704517 | 1101..1423 | 100 | -> | Plus |
X | 4704588..4705123 | 1424..1959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4702358..4702892 | 1..535 | 100 | -> | Plus |
X | 4703555..4704119 | 536..1100 | 100 | -> | Plus |
X | 4704195..4704517 | 1101..1423 | 100 | -> | Plus |
X | 4704588..4705123 | 1424..1959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4702358..4702892 | 1..535 | 100 | -> | Plus |
X | 4703555..4704119 | 536..1100 | 100 | -> | Plus |
X | 4704195..4704517 | 1101..1423 | 100 | -> | Plus |
X | 4704588..4705123 | 1424..1959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 4596391..4596925 | 1..535 | 100 | -> | Plus |
arm_X | 4597588..4598152 | 536..1100 | 100 | -> | Plus |
arm_X | 4598228..4598550 | 1101..1423 | 100 | -> | Plus |
arm_X | 4598621..4599156 | 1424..1959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4710456..4710990 | 1..535 | 100 | -> | Plus |
X | 4711653..4712217 | 536..1100 | 100 | -> | Plus |
X | 4712293..4712615 | 1101..1423 | 100 | -> | Plus |
X | 4712686..4713221 | 1424..1959 | 100 | Plus |
Translation from 619 to 1605
> LD13846.pep MQTIRRLETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNIISA YRVHGWTYLMGVSPSGVLAELTGVQGGCARGKGGSMHMYAPNFYGGNGIV GAQVPLGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEAYNMAYLWKLP VIFVCENNNYGMGTSSERASCNTDYYTRGDALPGIWVDGMDVLAVRSATE FAINYVNTHGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPIT SFKELCIELGLITTDEVKAIDLKVRKEVDEATAFAKSDAELGVSHLWTDV YSNNLEPKLRGTIAYDIDHIQERKGVNH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22274-PA | 399 | GF22274-PA | 72..399 | 1..328 | 1741 | 97.6 | Plus |
Dana\GF15055-PA | 403 | GF15055-PA | 76..399 | 1..324 | 1106 | 62 | Plus |
Dana\GF22275-PA | 520 | GF22275-PA | 82..401 | 1..320 | 1071 | 60.3 | Plus |
Dana\GF18476-PA | 439 | GF18476-PA | 128..412 | 29..306 | 280 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18722-PA | 440 | GG18722-PA | 113..440 | 1..328 | 1778 | 100 | Plus |
Dere\GG18723-PA | 480 | GG18723-PA | 70..390 | 1..321 | 1079 | 60.4 | Plus |
Dere\GG16874-PA | 439 | GG16874-PA | 128..408 | 29..302 | 271 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12828-PA | 399 | GH12828-PA | 72..399 | 1..328 | 1693 | 94.5 | Plus |
Dgri\GH20215-PA | 513 | GH20215-PA | 66..384 | 1..319 | 1105 | 62.4 | Plus |
Dgri\GH18279-PA | 439 | GH18279-PA | 127..412 | 28..306 | 298 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pdha-PB | 328 | CG7010-PB | 1..328 | 1..328 | 1744 | 100 | Plus |
Pdha-PD | 399 | CG7010-PD | 72..399 | 1..328 | 1744 | 100 | Plus |
Pdha-PA | 399 | CG7010-PA | 72..399 | 1..328 | 1744 | 100 | Plus |
Pdha-PC | 443 | CG7010-PC | 116..443 | 1..328 | 1744 | 100 | Plus |
CG7024-PA | 479 | CG7024-PA | 70..390 | 1..321 | 1075 | 61.1 | Plus |
CG8199-PA | 439 | CG8199-PA | 128..388 | 29..278 | 262 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14910-PA | 399 | GI14910-PA | 72..399 | 1..328 | 1672 | 94.2 | Plus |
Dmoj\GI14124-PA | 420 | GI14124-PA | 91..419 | 1..328 | 1187 | 63.5 | Plus |
Dmoj\GI14911-PA | 461 | GI14911-PA | 35..353 | 1..319 | 1093 | 60.8 | Plus |
Dmoj\GI24087-PA | 435 | GI24087-PA | 124..405 | 29..303 | 302 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13094-PA | 399 | GL13094-PA | 72..399 | 1..328 | 1709 | 95.4 | Plus |
Dper\GL18702-PA | 414 | GL18702-PA | 88..412 | 1..325 | 1106 | 64 | Plus |
Dper\GL13095-PA | 540 | GL13095-PA | 92..410 | 1..319 | 1089 | 62.1 | Plus |
Dper\GL22326-PA | 439 | GL22326-PA | 128..412 | 29..306 | 279 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20028-PA | 399 | GA20028-PA | 72..399 | 1..328 | 1701 | 95.1 | Plus |
Dpse\GA25763-PA | 414 | GA25763-PA | 88..412 | 1..325 | 1115 | 64.3 | Plus |
Dpse\GA20040-PA | 533 | GA20040-PA | 92..410 | 1..319 | 1086 | 61.8 | Plus |
Dpse\GA20891-PA | 439 | GA20891-PA | 128..412 | 29..306 | 279 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12361-PA | 441 | GM12361-PA | 114..441 | 1..328 | 1777 | 100 | Plus |
Dsec\GM12362-PA | 475 | GM12362-PA | 69..389 | 1..321 | 1097 | 61.1 | Plus |
Dsec\GM23814-PA | 439 | GM23814-PA | 128..388 | 29..278 | 254 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16702-PA | 392 | GD16702-PA | 72..392 | 1..328 | 1712 | 97.3 | Plus |
Dsim\GD16703-PA | 476 | GD16703-PA | 70..390 | 1..321 | 1096 | 61.1 | Plus |
Dsim\GD18623-PA | 439 | GD18623-PA | 128..388 | 29..278 | 254 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18942-PA | 399 | GJ18942-PA | 72..399 | 1..328 | 1661 | 93.3 | Plus |
Dvir\GJ17759-PA | 420 | GJ17759-PA | 94..419 | 4..328 | 1179 | 63.5 | Plus |
Dvir\GJ18943-PA | 548 | GJ18943-PA | 81..399 | 1..319 | 1121 | 62.7 | Plus |
Dvir\GJ10905-PA | 437 | GJ10905-PA | 126..405 | 29..301 | 286 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25306-PA | 474 | GK25306-PA | 147..474 | 1..328 | 1752 | 97 | Plus |
Dwil\GK15549-PA | 430 | GK15549-PA | 104..426 | 1..323 | 1169 | 65.3 | Plus |
Dwil\GK25307-PA | 632 | GK25307-PA | 89..409 | 1..321 | 1103 | 61.7 | Plus |
Dwil\GK11824-PA | 439 | GK11824-PA | 128..412 | 29..306 | 283 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16361-PA | 438 | GE16361-PA | 111..438 | 1..328 | 1775 | 100 | Plus |
Dyak\GE16362-PA | 485 | GE16362-PA | 70..390 | 1..321 | 1077 | 59.5 | Plus |
Dyak\GE25960-PA | 439 | GE25960-PA | 128..408 | 29..302 | 270 | 29.9 | Plus |
Translation from 619 to 1605
> LD13846.hyp MQTIRRLETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNIISA YRVHGWTYLMGVSPSGVLAELTGVQGGCARGKGGSMHMYAPNFYGGNGIV GAQVPLGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEAYNMAYLWKLP VIFVCENNNYGMGTSSERASCNTDYYTRGDALPGIWVDGMDVLAVRSATE FAINYVNTHGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPIT SFKELCIELGLITTDEVKAIDLKVRKEVDEATAFAKSDAELGVSHLWTDV YSNNLEPKLRGTIAYDIDHIQERKGVNH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0334-PB | 328 | CG7010-PB | 1..328 | 1..328 | 1744 | 100 | Plus |
l(1)G0334-PD | 399 | CG7010-PD | 72..399 | 1..328 | 1744 | 100 | Plus |
l(1)G0334-PA | 399 | CG7010-PA | 72..399 | 1..328 | 1744 | 100 | Plus |
l(1)G0334-PC | 443 | CG7010-PC | 116..443 | 1..328 | 1744 | 100 | Plus |
CG7024-PA | 479 | CG7024-PA | 70..390 | 1..321 | 1075 | 61.1 | Plus |