BDGP Sequence Production Resources |
Search the DGRC for LD13915
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 139 |
Well: | 15 |
Vector: | pBS SK- |
Associated Gene/Transcript | GPHR-RA |
Protein status: | LD13915.pep: gold |
Preliminary Size: | 1521 |
Sequenced Size: | 1841 |
Gene | Date | Evidence |
---|---|---|
CG8090 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8090 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8090 | 2008-04-29 | Release 5.5 accounting |
CG8090 | 2008-08-15 | Release 5.9 accounting |
CG8090 | 2008-12-18 | 5.12 accounting |
1841 bp (1841 high quality bases) assembled on 2005-08-09
GenBank Submission: BT023838
> LD13915.complete CTTTTTTGTTTATATTTGCTTGTTGGCATTTTCAGTTCCCAGAACAATTC TTTTTAAAGTTAATTAGCTTAACTAAGCAATGCCAGTAACAAGACAATCT GGAAAGTAATTGACATATCCGATCTGAAGGCAGACAAGGCATTAAAATGG CCTTCCTGGGCGACTGTGTTATTGTGTTCGTGTCGCAGATGATATTCTTC GCCGGCGGCTGGCTGTTTTTCAACAAAGAACTCTTCAAGCACTATGAGAT ACGACATATATCCGTTCAGTTGATTTTTTCATCCACATTTGCCTTATCCA TAACCATGTTCGAGTTGATCATATTCGAAATCATCGATGTTCTGGAGTCC AGTTCAAGGTACTTCCATTGGCGACTGGGTCTCACGTTACTACTCTTTAT GACGACGGCTGTGATACCCATTTACATTTGCTACTCCGTGATACACAGCA TTTCTTTCTTTTCCGATAAATGGGTCCGAATTCTGACCACATTCTGTTGG TTCATCTTTATATATGGGCTTTGGCGGATTGGTGACCCCTTTCCTTTGCT GAGCGCTTCCCACGGAATCTTTACGATCGAACAGGGCGTTTCCCGGATTA GTGTGATTGGGGTCACTGTAATGGCCATACTTTCTGGCTTTGGTGCCGTC AATTATCCGTACACCAGTATGTCCTATTTCATCAAGCCAGTGTCTCGGAA TGATATCATCTGTTTTGAAAGGCGTTTGGCTTTGACAGTAGAAATGCTGT CGGCCAAAAAGCGGAAGATTGCCATGGCCATCTATAATCACAACAAACTG AATCCTTCCAAACCCAGAATTTGGGATATGCTTGCTTCTGCGGTCCAGCG CAACACGAACAGTGGCGAAGACATCAATCAATTAAAACAGGAAGTGTATG GCTTGGAGGAGCTATTACGCTCTGTTTTCTTAGAACTTAGTTCATTGAAA AACATGGAAGAACGCCAAAGATGGTCTCAAACATTGAAGGGAAAGTACTT CAATGTACTAGGACATTTTTTTAGTGTTTATTGTGTTTATAAGATATTTA TGTGTTGCATCAACATTATCTTCGATAGAGTCGGTCGCAAGGATCCAGTC ACACGAGGCCTTGAAATTGCCATACACTGGTGCGGCTTTAACATTGACTT TGCGTTCTGGAATCAGCATATATCATTTCTGCTCGTCGGCTGCATTGTGA TCACCTCGATTAGAGGTTTGTTGCTAACGCTGACAAAATTCTTTTATCGC ATTTCATCGAGCAAGTCGAGCAACATCATAGTACTTATTTTGGGCCAGAT CATGGGCATGTACTTCTGTTCCTCAGTATTGCTGATGCGCATGAACATGC CAGCCGAGTATCGTGTGATCATCACCGAGGTTCTAGGAAATCTGCACTTC AACTTCTACCATCGTTGGTTTGACGTAATATTCCTGGTCAGCGCATTGAC CACCATCATTGTTCTATATCTGTCACGCAAGCCAGTTCGCGTGGACGATT CCGATCTGAACTGATTTAAACTTGAGCGCTTCTGAGAGCCATTAGCCTCT CATTTTAGGATAACCCGAAACGATTTAGAATCAGTTAGCCTAATTATTGC AAGCTTTAAGTTATATATATCCGTGTATATACCAGTGTGTATGTATATAT TTAATGCACATTAAGCTAACTTACTGTATAACGATGCACAAAAATCAAAG TAACATTTGTTTGATTAAGTGAAATAAAACAACAAACTGTTTGTCTCTGA AAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 11086275..11086792 | 1756..1239 | 2590 | 100 | Minus |
chr2R | 21145070 | chr2R | 11087867..11088140 | 459..186 | 1370 | 100 | Minus |
chr2R | 21145070 | chr2R | 11087580..11087806 | 686..460 | 1135 | 100 | Minus |
chr2R | 21145070 | chr2R | 11088199..11088386 | 188..1 | 940 | 100 | Minus |
chr2R | 21145070 | chr2R | 11086845..11087031 | 1238..1052 | 935 | 100 | Minus |
chr2R | 21145070 | chr2R | 11087329..11087513 | 870..686 | 925 | 100 | Minus |
chr2R | 21145070 | chr2R | 11087088..11087271 | 1052..869 | 920 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 15199064..15199582 | 1757..1239 | 2595 | 100 | Minus |
2R | 25286936 | 2R | 15200657..15200930 | 459..186 | 1370 | 100 | Minus |
2R | 25286936 | 2R | 15200370..15200596 | 686..460 | 1135 | 100 | Minus |
2R | 25286936 | 2R | 15200989..15201176 | 188..1 | 940 | 100 | Minus |
2R | 25286936 | 2R | 15199635..15199821 | 1238..1052 | 935 | 100 | Minus |
2R | 25286936 | 2R | 15200119..15200303 | 870..686 | 925 | 100 | Minus |
2R | 25286936 | 2R | 15199878..15200061 | 1052..869 | 920 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 15200263..15200781 | 1757..1239 | 2595 | 100 | Minus |
2R | 25260384 | 2R | 15201856..15202129 | 459..186 | 1370 | 100 | Minus |
2R | 25260384 | 2R | 15201569..15201795 | 686..460 | 1135 | 100 | Minus |
2R | 25260384 | 2R | 15202188..15202375 | 188..1 | 940 | 100 | Minus |
2R | 25260384 | 2R | 15200834..15201020 | 1238..1052 | 935 | 100 | Minus |
2R | 25260384 | 2R | 15201318..15201502 | 870..686 | 925 | 100 | Minus |
2R | 25260384 | 2R | 15201077..15201260 | 1052..869 | 920 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11086275..11086792 | 1239..1756 | 100 | <- | Minus |
chr2R | 11086845..11087030 | 1053..1238 | 100 | <- | Minus |
chr2R | 11087088..11087269 | 871..1052 | 100 | <- | Minus |
chr2R | 11087329..11087513 | 686..870 | 100 | <- | Minus |
chr2R | 11087581..11087806 | 460..685 | 100 | <- | Minus |
chr2R | 11087867..11088137 | 189..459 | 100 | <- | Minus |
chr2R | 11088199..11088386 | 1..188 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8090-RA | 1..1368 | 147..1514 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8090-RA | 1..1368 | 147..1514 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8090-RA | 1..1368 | 147..1514 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8090-RA | 1..1368 | 147..1514 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GPHR-RA | 1..1368 | 147..1514 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8090-RA | 1..1756 | 1..1756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8090-RA | 1..1756 | 1..1756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8090-RA | 25..1780 | 1..1756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8090-RA | 1..1756 | 1..1756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GPHR-RA | 25..1780 | 1..1756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15199065..15199582 | 1239..1756 | 100 | <- | Minus |
2R | 15199635..15199820 | 1053..1238 | 100 | <- | Minus |
2R | 15199878..15200059 | 871..1052 | 100 | <- | Minus |
2R | 15200119..15200303 | 686..870 | 100 | <- | Minus |
2R | 15200371..15200596 | 460..685 | 100 | <- | Minus |
2R | 15200657..15200927 | 189..459 | 100 | <- | Minus |
2R | 15200989..15201176 | 1..188 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15199065..15199582 | 1239..1756 | 100 | <- | Minus |
2R | 15199635..15199820 | 1053..1238 | 100 | <- | Minus |
2R | 15199878..15200059 | 871..1052 | 100 | <- | Minus |
2R | 15200119..15200303 | 686..870 | 100 | <- | Minus |
2R | 15200371..15200596 | 460..685 | 100 | <- | Minus |
2R | 15200657..15200927 | 189..459 | 100 | <- | Minus |
2R | 15200989..15201176 | 1..188 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15199065..15199582 | 1239..1756 | 100 | <- | Minus |
2R | 15199635..15199820 | 1053..1238 | 100 | <- | Minus |
2R | 15199878..15200059 | 871..1052 | 100 | <- | Minus |
2R | 15200119..15200303 | 686..870 | 100 | <- | Minus |
2R | 15200371..15200596 | 460..685 | 100 | <- | Minus |
2R | 15200657..15200927 | 189..459 | 100 | <- | Minus |
2R | 15200989..15201176 | 1..188 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11086570..11087087 | 1239..1756 | 100 | <- | Minus |
arm_2R | 11087140..11087325 | 1053..1238 | 100 | <- | Minus |
arm_2R | 11087383..11087564 | 871..1052 | 100 | <- | Minus |
arm_2R | 11087624..11087808 | 686..870 | 100 | <- | Minus |
arm_2R | 11087876..11088101 | 460..685 | 100 | <- | Minus |
arm_2R | 11088162..11088432 | 189..459 | 100 | <- | Minus |
arm_2R | 11088494..11088681 | 1..188 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15201856..15202126 | 189..459 | 100 | <- | Minus |
2R | 15202188..15202375 | 1..188 | 100 | Minus | |
2R | 15200264..15200781 | 1239..1756 | 100 | <- | Minus |
2R | 15200834..15201019 | 1053..1238 | 100 | <- | Minus |
2R | 15201077..15201258 | 871..1052 | 100 | <- | Minus |
2R | 15201318..15201502 | 686..870 | 100 | <- | Minus |
2R | 15201570..15201795 | 460..685 | 100 | <- | Minus |
Translation from 146 to 1513
> LD13915.pep MAFLGDCVIVFVSQMIFFAGGWLFFNKELFKHYEIRHISVQLIFSSTFAL SITMFELIIFEIIDVLESSSRYFHWRLGLTLLLFMTTAVIPIYICYSVIH SISFFSDKWVRILTTFCWFIFIYGLWRIGDPFPLLSASHGIFTIEQGVSR ISVIGVTVMAILSGFGAVNYPYTSMSYFIKPVSRNDIICFERRLALTVEM LSAKKRKIAMAIYNHNKLNPSKPRIWDMLASAVQRNTNSGEDINQLKQEV YGLEELLRSVFLELSSLKNMEERQRWSQTLKGKYFNVLGHFFSVYCVYKI FMCCINIIFDRVGRKDPVTRGLEIAIHWCGFNIDFAFWNQHISFLLVGCI VITSIRGLLLTLTKFFYRISSSKSSNIIVLILGQIMGMYFCSSVLLMRMN MPAEYRVIITEVLGNLHFNFYHRWFDVIFLVSALTTIIVLYLSRKPVRVD DSDLN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12626-PA | 455 | GF12626-PA | 1..455 | 1..455 | 2186 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22371-PA | 455 | GG22371-PA | 1..455 | 1..455 | 2265 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20796-PA | 442 | GH20796-PA | 1..441 | 15..455 | 2136 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GPHR-PA | 455 | CG8090-PA | 1..455 | 1..455 | 2367 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20881-PA | 448 | GI20881-PA | 1..448 | 1..455 | 2159 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11475-PA | 449 | GL11475-PA | 1..449 | 1..455 | 2132 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20816-PA | 447 | GA20816-PA | 1..447 | 1..455 | 2121 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20156-PA | 402 | GM20156-PA | 1..402 | 54..455 | 2105 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25634-PA | 455 | GD25634-PA | 1..455 | 1..455 | 2377 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20616-PA | 450 | GJ20616-PA | 1..450 | 1..455 | 2187 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19445-PA | 455 | GK19445-PA | 1..455 | 1..455 | 2227 | 90.3 | Plus |
Translation from 146 to 1513
> LD13915.hyp MAFLGDCVIVFVSQMIFFAGGWLFFNKELFKHYEIRHISVQLIFSSTFAL SITMFELIIFEIIDVLESSSRYFHWRLGLTLLLFMTTAVIPIYICYSVIH SISFFSDKWVRILTTFCWFIFIYGLWRIGDPFPLLSASHGIFTIEQGVSR ISVIGVTVMAILSGFGAVNYPYTSMSYFIKPVSRNDIICFERRLALTVEM LSAKKRKIAMAIYNHNKLNPSKPRIWDMLASAVQRNTNSGEDINQLKQEV YGLEELLRSVFLELSSLKNMEERQRWSQTLKGKYFNVLGHFFSVYCVYKI FMCCINIIFDRVGRKDPVTRGLEIAIHWCGFNIDFAFWNQHISFLLVGCI VITSIRGLLLTLTKFFYRISSSKSSNIIVLILGQIMGMYFCSSVLLMRMN MPAEYRVIITEVLGNLHFNFYHRWFDVIFLVSALTTIIVLYLSRKPVRVD DSDLN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GPHR-PA | 455 | CG8090-PA | 1..455 | 1..455 | 2367 | 100 | Plus |