BDGP Sequence Production Resources |
Search the DGRC for LD13959
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 139 |
Well: | 59 |
Vector: | pBS SK- |
Associated Gene/Transcript | SuUR-RA |
Protein status: | LD13959.pep: gold |
Preliminary Size: | 3332 |
Sequenced Size: | 3769 |
Gene | Date | Evidence |
---|---|---|
CG7869 | 2001-01-01 | Release 2 assignment |
CG7869 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7869 | 2003-04-25 | Blastp of sequenced clone |
SuUR | 2008-04-29 | Release 5.5 accounting |
SuUR | 2008-08-15 | Release 5.9 accounting |
SuUR | 2008-12-18 | 5.12 accounting |
3769 bp (3769 high quality bases) assembled on 2003-04-25
GenBank Submission: BT010066
> LD13959.complete AAATAGAATTGGAGCCAAAAATAATATTTTCTTCTTGTTCGATTGTTAAG CCTTTTCCCGCGCCCCCGCCATGACTAACAGCGCTTAACCCAATTTCCCA AAAGGGACGAAAATTGTCCTCCGAAAAAATTGAAGCTTAACTAGTTTCAA CACATGTACGAGATCCAACATCCTGTTATCATCAACAACAACTACAACGT GGTGGACATACTGCATCCGGAGAATATCGAATTCGATGGGCCGTCTGCGG CGCGAAAGATGATAATTGGTTCATTTTCGATGTTCGTGATCTTCTCGTAC CTGCAACTATTCTACATCCTGGTTGCCATCTATCTGGCCCTGCATCACGC ACACCATTGATTCGAATTCTCTGAAGGATCATGTATCACTTTGTATCCGA GCAAACGCCGGAGGTGCGGCTCACAGATGAGGCACTGGTCACGAGCCACG TGACGCAGTACCTCAAGAGCTTTCAACTGGATGCCGTCCGCTTCGTCTAC GATCGTTTGGCTAAGCGGGAATTCTGCATCCTGAATGATGAGAGTGGCCT TGGAAAGGTCGCTACGGTGGCGGCACTTCTAAGTGCCCTACCACCCGCCA AAAAAACACTTGTGGTGCTCCAGAACGATGAGCAACTGCTCACCGGTTGG CGATTCCATTTGGACACTCTCACTGACCTCCAGGTGTACATCATTCAGGG GGTGCAAGATACCACCGACTCCCCGCACAGCGTTTACCTGGCGAAATGGA GCCAACTACGGAGCATTGGAGATCTCAGTCGCCTCAAGTTCGACTACATT ATGGTGGATAATCGGGGGCATTCGCTGAACAACAGCTTTTGCACTTCCAT GCTGCTGAAGCAATTCGAGGGACGGGTAAACGTTCTTATCTCCAGTGTTG ACGTTACGTCCGACGTTAGGTTGCTCTACAATGTTCTACGGTTGGGCGGC CGACTGGAGCATCAGTACAAAAGCTTTGCGAGCTTCGATCGAAAATTCCA TCTGCCAGATCCGAAGGAGGTATTCAGTAAGCGCATAGATCTCGAGGAAT ACTACAAGCAGCGGGGATTCCTCAGCGAGTACATCAAGGACTTTCGTCTG CGTCGTTTTCGTCATCAATTCGACAAGTCACTGCCACTTGTCGCACCGGA GCAATACAAACACAATCTGAATCTCTGGTTGGCCTCAAAGAACAGCCAGA GCACAATAAGCGGCTCAGATGTGTGCTCTACAATCGCTTCCATAGACAAC AATCCGGCTCAGCAAAATAAAACTGGGCTCTTTGAAGAAACGGATAGGTT ATCCGAGCACAGCGTGGATGATGTGGCAATGTCACCGCTGATATTCGAGT ATTCCGAGTCTGACGATGAACCCCTAACAGTAGAACCTGATGCAGATCAA AACCCGGTATTAGTTGTATCCAGCGATGATTGTGAGATTGTAACACCTCC AAGTACTCCGCAAAATCGAACGCCCTCATTAAATGAATCACCAAGGACGA AATCAAAGAAAAAATTTAGCAAAAAAACGTCACCGCGCAAAAAAGCTGAT CTCACCGATTCCGAAGAGGATGATGAAGCGACCGATAATATGCCGCCAAG GAAGAGAACTCGTGCAGCCACCGTTCATCTGACACCTAAGACAAGGAGAC TCAATGTTCGAATTTTAAGGGTTTCCCTCGATACTCTGAGCACACCACCA CCGTCCAGAACCACTACTGCGATCGTAACGCCCAAAACGGAGCCCACAGC TAGAAGAAAAAATCTGAAAAAGCGCACGGTGAGCCCAGTGGATGTGGGTC GTCCAGCCACAAGGGGAATGCAGCGCCTAACACGATCCGCTGAAACAAAA ATAAACAGTAAGTACTTGAAACATCGCTCATTGGATGATGTCAAGCGTAG CTTTCCAAGGAGAGTCAAGTTGGAGGGTAACCAAACGCCCAGAAGTAGCA AACAAATAGTGAAGCAGGAGCCTAAGTCTAAAGTCGGGCAGGAAAAGAAA CAGAAGACGGTGGATGTACCTGCTCAAGGAACTGCGAAACGAAAGCCTGG ACGTCCGAGAAAATGCCAAACCAAGACTGAAGATTTGGGGAAGACAAAGA CTAAGCCGAATTCAAAGCACTTGCCACCTACTCCTCAAGTTCTCAGTGGT AGCTCGTTGTCCTCGGAGTACATGCAATGTGCTCAGCGAATACCAGACAA TTTGGATGCCATTGAGTCGCCCGCTTTTCGTGTGCCCTTTACACCTCAAC AAACTCCAATGCTTCTAACCTTGCCGTCTACACACAATTTGCTCAACGAT TCTGAGGTGGTGTCTATTCCGCTTTACAAAGATCCAGTTGAGACAGTGGT GATCAATAGCTCGCACGATGAGTGTTCTCCGCAGGATCCATCGCAGAGTC GTCGCACCAAGGCTTTGAAAAGAAAACGCAAACCCGTGACGTCCGTCAAT TCAAGTTTCGGCGGCGGATTGGGTCTACCACCGGCCAAGAGGAGTGCCAA CAAATCTCCAGATCTATTTAGCATATCCTCGGAACACTCGCAGATTCCGC TGGCGCAACCAAGACCCTCATCGCCCTTCGAAGGCTTTAAGATCTTTGGC TCTGAGGTGAAGCAGTTTCAGCAGCAGCTAGCGAAAGTAAATATATCGGT GCCAAAAAAGAAGCGAGATCGCTCGTGTTTGGATATCCTGGAGCAAATGT TCGAGCCACGACAACAGCAGTCGGCTAAAACTAGTCCCAAAGTCTTGCCA ACCTTGCCACTGACCCAGAAGGATGATGCAGAGTCTACCATTACGCAGAG AAGAAGAACCCTGCTGGAAGATGACTTCTTTGAGATAACGAACAATGGCC AATTTGGCAGTCGCATGCGATTGAACTCCTCTGGCGAAGTATCGCCCGTG CAACCGGATCAACAGTCCGTCAGGCCGTCGCAGGCCAATAAAATCACCAA TTATTTGATAGGTTCTGGAATTACGCAGGAGCGAACGCAACCTTCGAATG GTAATCGCAATTCCATTCTTGCATCGCTGCGCAAGTCACCCAAATCTCCC AAACAGGGTGCTAAATCCACTCAGGCCACGAAACTAACACGCTGGTTTGG CTCCGTCTTCGGCGGTGGAGCCTCACAGACCAGCTCCGTGGAATCGGTTA GTGCACCAAGTACGCCGGTGAATTCATCCACAAGTGCAGCAGCTTGTCAA ACGCGATCGGCGAGAAGTGGTGGAGCATCAGGACCGACCAAAAGAAAGCG ATTGGAACTGTTCAAGTGATGAACAGCAATCAATGAAAATGACAAAAACC AAATCAAATCAAATCCAATTATTGAATATATAATGAATGAAGGAATATAT AACATATAGTACGAAATCAAAAGTTAACAGCATCCAAATATGAGGTTGTA AAATCAAATTGCACAGGACCGTCTAGCTAATTTAGTTAAAATTATACTTT GTGTGCGCATTTTGAAGAGTAAGGTTACCATAAAATTGAAAAGACACTGC ATAATATTGTATGCGTATCTTGTAAGTAGATATAATTGGTAAATTATTAG TTCACAAGTTTATCTAGTTTCTCAATTCATTTTCCAAAATGTGCCACCTG ATTTAGACGTGTTTTTTTTTTTTAAATTATTTCAATACGCATTCAAAGTG TATTCAACAATTTTAAAGTAACGAAAGATATCGTTTTTAGAAGCAAGTAC CGTGTAATTTTGTATCATCGTTAAATAAACACAGGGTTTACATTTAAAAA CAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SuUR-RA | 3823 | SuUR-RA | 72..3823 | 1..3751 | 18720 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11057238..11059921 | 1088..3751 | 12630 | 98.2 | Plus |
chr3L | 24539361 | chr3L | 11055893..11056595 | 1..708 | 3370 | 98.7 | Plus |
chr3L | 24539361 | chr3L | 11056705..11056906 | 707..908 | 995 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 11056972..11057152 | 908..1088 | 875 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11066361..11069028 | 1088..3754 | 13290 | 100 | Plus |
3L | 28110227 | 3L | 11065015..11065722 | 1..708 | 3540 | 100 | Plus |
3L | 28110227 | 3L | 11065828..11066029 | 707..908 | 1010 | 100 | Plus |
3L | 28110227 | 3L | 11066095..11066275 | 908..1088 | 905 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11059461..11062128 | 1088..3754 | 13300 | 99.9 | Plus |
3L | 28103327 | 3L | 11058115..11058822 | 1..708 | 3540 | 100 | Plus |
3L | 28103327 | 3L | 11058928..11059129 | 707..908 | 1010 | 100 | Plus |
3L | 28103327 | 3L | 11059195..11059375 | 908..1088 | 905 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11055893..11056595 | 1..708 | 98 | -> | Plus |
chr3L | 11056707..11056906 | 709..908 | 99 | -> | Plus |
chr3L | 11056973..11057151 | 909..1087 | 98 | -> | Plus |
chr3L | 11057238..11059496 | 1088..3341 | 98 | -> | Plus |
chr3L | 11059510..11059921 | 3342..3751 | 93 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SuUR-RA | 1..2889 | 381..3269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SuUR-RA | 1..2889 | 381..3269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SuUR-RA | 1..2889 | 381..3269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SuUR-RA | 1..2889 | 381..3269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SuUR-RA | 1..2889 | 381..3269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SuUR-RA | 19..3770 | 1..3751 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SuUR-RA | 19..3770 | 1..3751 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SuUR-RA | 25..3776 | 1..3751 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SuUR-RA | 19..3770 | 1..3751 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG45101-RA | 25..3776 | 1..3751 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11065015..11065722 | 1..708 | 100 | -> | Plus |
3L | 11065830..11066029 | 709..908 | 100 | -> | Plus |
3L | 11066096..11066274 | 909..1087 | 100 | -> | Plus |
3L | 11066361..11069025 | 1088..3751 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11065015..11065722 | 1..708 | 100 | -> | Plus |
3L | 11065830..11066029 | 709..908 | 100 | -> | Plus |
3L | 11066096..11066274 | 909..1087 | 100 | -> | Plus |
3L | 11066361..11069025 | 1088..3751 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11065015..11065722 | 1..708 | 100 | -> | Plus |
3L | 11065830..11066029 | 709..908 | 100 | -> | Plus |
3L | 11066096..11066274 | 909..1087 | 100 | -> | Plus |
3L | 11066361..11069025 | 1088..3751 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11058930..11059129 | 709..908 | 100 | -> | Plus |
arm_3L | 11059196..11059374 | 909..1087 | 100 | -> | Plus |
arm_3L | 11058115..11058822 | 1..708 | 100 | -> | Plus |
arm_3L | 11059461..11062125 | 1088..3751 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11059196..11059374 | 909..1087 | 100 | -> | Plus |
3L | 11058115..11058822 | 1..708 | 100 | -> | Plus |
3L | 11058930..11059129 | 709..908 | 100 | -> | Plus |
3L | 11059461..11062125 | 1088..3751 | 99 | Plus |
Translation from 380 to 3268
> LD13959.pep MYHFVSEQTPEVRLTDEALVTSHVTQYLKSFQLDAVRFVYDRLAKREFCI LNDESGLGKVATVAALLSALPPAKKTLVVLQNDEQLLTGWRFHLDTLTDL QVYIIQGVQDTTDSPHSVYLAKWSQLRSIGDLSRLKFDYIMVDNRGHSLN NSFCTSMLLKQFEGRVNVLISSVDVTSDVRLLYNVLRLGGRLEHQYKSFA SFDRKFHLPDPKEVFSKRIDLEEYYKQRGFLSEYIKDFRLRRFRHQFDKS LPLVAPEQYKHNLNLWLASKNSQSTISGSDVCSTIASIDNNPAQQNKTGL FEETDRLSEHSVDDVAMSPLIFEYSESDDEPLTVEPDADQNPVLVVSSDD CEIVTPPSTPQNRTPSLNESPRTKSKKKFSKKTSPRKKADLTDSEEDDEA TDNMPPRKRTRAATVHLTPKTRRLNVRILRVSLDTLSTPPPSRTTTAIVT PKTEPTARRKNLKKRTVSPVDVGRPATRGMQRLTRSAETKINSKYLKHRS LDDVKRSFPRRVKLEGNQTPRSSKQIVKQEPKSKVGQEKKQKTVDVPAQG TAKRKPGRPRKCQTKTEDLGKTKTKPNSKHLPPTPQVLSGSSLSSEYMQC AQRIPDNLDAIESPAFRVPFTPQQTPMLLTLPSTHNLLNDSEVVSIPLYK DPVETVVINSSHDECSPQDPSQSRRTKALKRKRKPVTSVNSSFGGGLGLP PAKRSANKSPDLFSISSEHSQIPLAQPRPSSPFEGFKIFGSEVKQFQQQL AKVNISVPKKKRDRSCLDILEQMFEPRQQQSAKTSPKVLPTLPLTQKDDA ESTITQRRRTLLEDDFFEITNNGQFGSRMRLNSSGEVSPVQPDQQSVRPS QANKITNYLIGSGITQERTQPSNGNRNSILASLRKSPKSPKQGAKSTQAT KLTRWFGSVFGGGASQTSSVESVSAPSTPVNSSTSAAACQTRSARSGGAS GPTKRKRLELFK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\SuUR-PA | 959 | GF10628-PA | 1..959 | 1..962 | 3175 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\SuUR-PA | 962 | GG15473-PA | 1..962 | 1..962 | 4344 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14929-PA | 981 | GH14929-PA | 1..981 | 1..962 | 2055 | 47.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SuUR-PA | 962 | CG7869-PA | 1..962 | 1..962 | 4922 | 100 | Plus |
Mur2B-PB | 1144 | CG14796-PB | 501..1081 | 358..935 | 169 | 19.7 | Plus |
Mur2B-PC | 1795 | CG14796-PC | 501..1081 | 358..935 | 169 | 19.7 | Plus |
Mur2B-PA | 1795 | CG14796-PA | 501..1081 | 358..935 | 169 | 19.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\SuUR-PA | 972 | GI11447-PA | 1..972 | 1..962 | 2095 | 49.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22910-PA | 989 | GL22910-PA | 1..989 | 1..962 | 2771 | 59.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\SuUR-PA | 986 | GA20646-PA | 1..986 | 1..962 | 2787 | 59.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\SuUR-PA | 957 | GM25245-PA | 1..957 | 1..962 | 4598 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\SuUR-PA | 954 | GD14278-PA | 1..954 | 1..962 | 4597 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\SuUR-PA | 1024 | GJ13644-PA | 1..1024 | 1..962 | 2084 | 49.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11263-PA | 911 | GK11263-PA | 1..911 | 1..962 | 2018 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\SuUR-PA | 965 | GE21782-PA | 1..965 | 1..962 | 4443 | 89.3 | Plus |
Translation from 380 to 3268
> LD13959.hyp MYHFVSEQTPEVRLTDEALVTSHVTQYLKSFQLDAVRFVYDRLAKREFCI LNDESGLGKVATVAALLSALPPAKKTLVVLQNDEQLLTGWRFHLDTLTDL QVYIIQGVQDTTDSPHSVYLAKWSQLRSIGDLSRLKFDYIMVDNRGHSLN NSFCTSMLLKQFEGRVNVLISSVDVTSDVRLLYNVLRLGGRLEHQYKSFA SFDRKFHLPDPKEVFSKRIDLEEYYKQRGFLSEYIKDFRLRRFRHQFDKS LPLVAPEQYKHNLNLWLASKNSQSTISGSDVCSTIASIDNNPAQQNKTGL FEETDRLSEHSVDDVAMSPLIFEYSESDDEPLTVEPDADQNPVLVVSSDD CEIVTPPSTPQNRTPSLNESPRTKSKKKFSKKTSPRKKADLTDSEEDDEA TDNMPPRKRTRAATVHLTPKTRRLNVRILRVSLDTLSTPPPSRTTTAIVT PKTEPTARRKNLKKRTVSPVDVGRPATRGMQRLTRSAETKINSKYLKHRS LDDVKRSFPRRVKLEGNQTPRSSKQIVKQEPKSKVGQEKKQKTVDVPAQG TAKRKPGRPRKCQTKTEDLGKTKTKPNSKHLPPTPQVLSGSSLSSEYMQC AQRIPDNLDAIESPAFRVPFTPQQTPMLLTLPSTHNLLNDSEVVSIPLYK DPVETVVINSSHDECSPQDPSQSRRTKALKRKRKPVTSVNSSFGGGLGLP PAKRSANKSPDLFSISSEHSQIPLAQPRPSSPFEGFKIFGSEVKQFQQQL AKVNISVPKKKRDRSCLDILEQMFEPRQQQSAKTSPKVLPTLPLTQKDDA ESTITQRRRTLLEDDFFEITNNGQFGSRMRLNSSGEVSPVQPDQQSVRPS QANKITNYLIGSGITQERTQPSNGNRNSILASLRKSPKSPKQGAKSTQAT KLTRWFGSVFGGGASQTSSVESVSAPSTPVNSSTSAAACQTRSARSGGAS GPTKRKRLELFK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SuUR-PA | 962 | CG7869-PA | 1..962 | 1..962 | 4922 | 100 | Plus |
Mur2B-PB | 1144 | CG14796-PB | 501..1081 | 358..935 | 169 | 19.7 | Plus |
Mur2B-PC | 1795 | CG14796-PC | 501..1081 | 358..935 | 169 | 19.7 | Plus |
Mur2B-PA | 1795 | CG14796-PA | 501..1081 | 358..935 | 169 | 19.7 | Plus |