Clone LD13977 Report

Gene	Date	Evidence
CG5055	2003-01-01	Sim4 clustering to Release 3
baz	2008-04-29	Picked prior to 5.5
baz	2008-08-15	Release 5.9 accounting
baz	2008-12-18	5.12 accounting

Clone Sequence Records

LD13977.complete Sequence

5473 bp assembled on 2008-05-28

GenBank Submission: BT032834

> LD13977.complete
AAAGAAACGATCGCCCAATTTAATCAAGTGCATATATGTGTGTGCAAAAT
AAAAAGTGCATTGCAGCAGTCAAAAATACATACTTATTATCGCAGATCGA
AGACGATAATAGTTATTGTTAACACGAAAAGTACGAAATGAAGGTCACCG
TCTGCTTCGGCGACGTTCGCATTCTGGTTCCCTGTGGTTCCGGCGAACTC
CTCGTCCGCGATCTCGTCAAGGAGGCCACGCGACGCTACATCAAGGCGGC
CGGCAAGCCCGATTCCTGGGTGACCGTGACGCATCTCCAGACACAGTCGG
GCATCCTCGATCCGGATGATTGTGTCCGCGACGTGGCCGACGATCGGGAG
CAGATATTGGCGCACTTTGATGACCCAGGACCCGATCCAGGAGTTCCGCA
AGGAGGCGGAGATGGAGCATCGGGCAGTTCGTCCGTTGGCACCGGTTCGC
CGGACATCTTTCGCGATCCCACCAACACGGAGGCGCCCACCTGTCCGCGG
GATCTCTCCACGCCACACATCGAGGTCACCAGCACCACATCGGGACCGAT
GGCTGGACTCGGAGTTGGACTGATGGTGCGTCGCAGCAGTGATCCCAATC
TGCTGGCCTCGCTGAAGGCAGAGGGCAGTAACAAACGCTGGTCGGCGGCG
GCTCCCCACTACGCTGGCGGGGATTCGCCGGAGCGCCTGTTTCTTGACAA
GGCCGGTGGCCAGTTATCGCCACAGTGGGAGGAGGACGACGATCCCAGTC
ATCAGCTAAAGGAACAGCTGCTACATCAACAGCAGCCCCATGCTGCTAAT
GGAGGCTCCTCCTCCGGTAACCATCAGCCGTTTGCCCGATCCGGTCGCCT
GTCGATGCAATTTCTTGGCGATGGCAATGGCTACAAGTGGATGGAGGCAG
CCGAGAAACTTCAGAATCAGCCGCCAGCCCAGCAGACATATCAGCAGGGT
TCTCATCATGCTGGTCATGGTCAAAACGGTGCCTACTCCAGCAAGTCCTT
GCCCAGGGAGAGCAAGCGAAAGGAGCCCTTGGGACAGGCATATGAATCCA
TCAGGGAGAAGGATGGTGAAATGCTGCTGATCATCAACGAGTACGGCAGT
CCGCTGGGACTAACTGCTCTGCCGGACAAGGAGCATGGCGGTGGACTGTT
GGTGCAACATGTGGAGCCGGGCAGCCGAGCCGAGAGAGGACGACTGCGTC
GTGATGATCGCATCTTGGAGATCAATGGAATCAAGCTAATAGGACTCACC
GAATCGCAGGTTCAGGAGCAACTGCGGCGGGCTTTGGAGAGCTCAGAGTT
GAGAGTTCGAGTGCTGCGCGGTGATCGCAATCGCCGCCAACAGCGTGACT
CTAAGGTGGCCGAGATGGTGGAGGTGGCTACGGTGTCACCCACCCGCAAA
CCACATGCTGCTCCGGTGGGCACCTCGCTGCAGGTGGCCAATACCCGTAA
ACTGGGCAGGAAAATCGAAATTATGCTCAAGAAGGGACCCAACGGTCTGG
GCTTTTCGGTCACAACACGCGATAATCCCGCCGGTGGCCACTGTCCCATC
TACATCAAGAATATCCTGCCACGAGGTGCGGCCATCGAGGATGGACGCCT
GAAGCCCGGCGATCGTTTGCTCGAGGTGGATGGCACTCCAATGACTGGTA
AAACACAAACGGATGTGGTGGCAATCTTGAGGGGCATGCCAGCGGGAGCA
ACCGTAAGGATTGTGGTCTCCCGCCAGCAGGAGTTGGCGGAGCAGGCTGA
CCAGCCGGCGGAGAAAAGTGCTGGTGTGGCGGTGGCGCCCTCAGTTGCTC
CACCAGCTGTTCCTGCAGCTGCAGCTCCAGCGCCTCCCATTCCGGTACAA
AAATCCAGCAGCGCACGTTCTCTGTTCACTCATCAGCAGCAATCGCAGCT
CAACGAATCTCAGCACTTTATTGATGCGGGCAGCGAGTCGGCGGCTTCAA
ATGACAGCCTGCCGCCCAGCAGCAACAGTTGGCACTCCCGCGAGGAGCTG
ACCCTGCACATTCCCGTACACGACACCGAAAAGGCCGGACTGGGTGTCAG
TGTGAAGGGAAAGACGTGCTCGAATCTGAACGCTTCCGGATCGAGTGCCT
CCAGCGGCAGCAATGGACTGATGAAGCATGACGGTGACTTGGGTATATTC
GTGAAGAATGTAATTCATGGCGGTGCTGCATCCCGCGATGGTCGCTTGCG
GATGAATGATCAACTGCTGAGCGTGAATGGAGTATCGCTGCGTGGGCAAA
ACAATGCCGAGGCCATGGAGACACTACGTCGGGCAATGGTCAACACGCCC
GGCAAACATCCGGGAACCATAACCCTGCTGGTAGGCCGCAAGATCTTGCG
ATCGGCCAGTTCCAGTGACATTCTGGACCACAGTAACAGTCACAGTCATA
GCCATAGCAATAGTAGCGGTGGCAGCAATTCAAATGGTAGCGGCAATAAC
AACAATAGCAGCTCGAATGCCAGCGATAATTCTGGAGCCACGGTCATATA
TTTGAGTCCGGAGAAGAGGGAGCAGCGCTGCAATGGCGGCGGAGGTGGTG
GCAGTGCTGGCAATGAGATGAATAGATGGAGCAATCCCGTTTTGGATCGC
CTAACCGGTGGCATTTGCTCCTCGAATTCAGCGCAGCCATCCTCTCAGCA
GTCTCACCAGCAGCAGCCGCATCCTTCGCAGCAGCAACAGCAGCAACGTC
GCCTGCCTGCAGCGCCCGTTTGCAGCAGTGCAGCTCTGAGAAACGAGAGC
TACTACATGGCCACCAATGACAACTGGTCGCCGGCGCAGATGCACTTAAT
GACTGCTCATGGCAACACGGCGCTGCTTATCGAGGACGATGCCGAGCCGA
TGTCTCCAACACTACCGGCACGTCCGCATGATGGGCAGCACTGCAACACG
AGCAGTGCTAATCCATCGCAGAACTTGGCCGTCGGCAATCAGGGGCCACC
CATAAATACCGTGCCTGGTACTCCGTCGACATCCAGCAACTTTGATGCCA
CCTACTCCTCGCAACTGAGCTTGGAGACAAACTCGGGCGTGGAGCATTTC
TCGCGCGATGCTTTGGGACGACGCAGCATCTCTGAGAAGCACCATGCGGC
GCTGGATGCCCGCGAAACTGGCACCTATCAGCGGAATAAGAAGTTACGCG
AGGAGCGCGAACGCGAGCGTCGCATTCAGCTGACCAAATCGGCTGTGTAT
GGTGGTTCCATTGAGTCCCTTACGGCTCGCATAGCCAGTGCTAATGCCCA
GTTTTCGGGATATAAACATGCCAAGACTGCATCCAGTATCGAGCAAAGAG
AGACGCAGCAGCAATTGGCCGCTGCGGAGGCGGAGGCAAGGGATCAGCTG
GGCGATCTGGGTCCATCGCTGGGCATGAAGAAGTCCTCGTCGTTGGAGTC
GCTCCAGACTATGGTGCAGGAGCTGCAGATGTCGGATGAGCCGCGTGGTC
ATCAGGCGTTGCGCGCACCGCGTGGGCGTGGCAGGGAGGACAGTCTGCGG
GCGGCGGTGGTCAGCGAACCGGATGCGAGCAAGCCCCGCAAGACCTGGCT
TTTGGAGGATGGCGATCACGAGGGTGGTTTTGCCTCGCAGCGCAATGGAC
CGTTCCAGAGTTCCCTGAACGATGGCAAACACGGCTGCAAGTCGTCGCGG
GCCAAGAAGCCAAGCATACTGCGCGGTATCGGTCACATGTTCCGCTTTGG
CAAGAATCGCAAGGATGGCGTGGTGCCAGTGGATAACTATGCGGTAAACA
TTTCGCCCCCTACATCGGTGGTTTCCACAGCCACATCGCCGCAGCTGCAG
CAGCAGCAACAGCAGCAGTTGCAGCAACATCAGCAGCAACAACAGATACC
AACCGCTGCATTGGCTGCTCTGGAGAGAAATGGCAAACCGCCGGCGTATC
AGCCACCGCCACCGCTGCCTGCTCCAAATGGAGTGGGTAGCAATGGTATC
CATCAGAACGACATCTTCAACCATCGCTATCAGCATTATGCCAACTACGA
GGACCTCCACCAGCAGCACCAGCAACACCAGATTAGTCGCCGCCATCAGC
ATTACCATTCGCAGCGCAGTGCCCGCTCGCAGGATGTGAGCATGCACTCG
ACGAGCTCCGGATCCCAGCCAGGATCCCTGGCTCAGCCGCAAGCGCAATC
AAACGGCGTTCGTCCCATGAGCAGTTACTACGAGTACGAGACGGTTCAAC
AGCAACGGGTGGGCAGCATCAAGCATAGCCACAGCAGCAGCGCCACGTCG
TCCTCCTCGTCGCCCATCAATGTGCCGCATTGGAAGGCGGCAGCCATGAA
TGGCTACTCGCCAGCCAGCCTGAATAGCAGTGCCCGGAGTCGAGGTCCGT
TTGTGACGCAGGTGACCATACGGGAGCAGAGCAGTGGCGGCATACCCGCC
CACCTGCTGCAGCAACATCAGCAGCAGCAACTCCAGCAGCAGCAGCCCAC
CTACCAGACTGTTCAGAAGATGTCAGGACCATCGCAATATGGTAGTGCCG
CCGGTTCCCAGCCACACGCCTCCAAGGTGTGACTATAGGTGTTGGCGCAA
GCGCGCGCCACTCGCGATGTGCTGGCCGAAAATCGGGTCGTTCTCAGCGA
GGTCAACGAGGAGGTGGAAGTATTCTACTTCGCCACCGAGTGCTGAACAC
ATTGCATAATCGAGGGAATTATTTGTTTAAGTTAGATAAAGTGTAATTTG
CACTAAACCACATGCATAAGGGGTGGGTTGGTTAATGTAATCTTGTCTAT
TCAACATGCAATTAATATGAGACAAGAGGAAATTTATTTTATATTATGAG
GTTTAAATTTGATTTGTAACTAGCTCCAAGCCAAGGAATGGTTGCTATAT
AATTTAAATTCTATCCTGATTAAACAATATATGTATATATATATATATAT
ATTTATCCGTGATATATGATTAAGCAAACAAAACCTAGACGTTTTCTTGC
TAAGCGGAAAGAACCAGGATAATATTTACATTAGTATTCCATCATAATTT
CATGGTCCAAGTGGAAAGGATAAACTTGATTTTATATTTGTAAATTGCTA
AGAATACTACTTGGTTTCATTGGATTTCCAACCTATTGACCCACCCTGAC
ACACGTCTATATTAAGTTCACAATTCACAATATATAAACTAAAAAATTGC
ATATTTGGCGAAACAGAAACCAAGAGAGTAACGATTAAGGAAAGTATTCC
CGTAAAGCGCTATCAATTTGTCGAGTGCTTAGATTTAATTTAAATGATCG
TATTAAGCTTTAGCTCTAAGTCCAAGTCAAACGCCTTTGTACATAACTAG
TTTACCCAAAAGCCAACAAGAAAACAGAACAACATCAAATCCCAAAAGTT
TTGGACCTACACTGCGAAAGGTCTTAACAATTTCCATTGTCATTTATGTA
AGATTGTTTATTATTATTGTTTATTATTAATTTAATTATTAGTTTAATTC
TAAAAAAAAAAAAAAAAAAAAAA

LD13977.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:01:46

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
baz-RA	6527	baz-RA	926..6379	1..5454	27270	100	Plus
baz.b	11098	baz.b	926..6379	1..5454	27270	100	Plus
baz.a	10366	baz.a	343..4125	255..4037	18915	100	Plus
baz.a	10366	baz.a	4228..5647	4035..5454	7100	100	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:48:08

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chrX	22417052	chrX	17078436..17080133	256..1953	8490	100	Plus
chrX	22417052	chrX	17083343..17084759	4035..5451	7070	99.9	Plus
chrX	22417052	chrX	17081234..17081907	2858..3531	3370	100	Plus
chrX	22417052	chrX	17080201..17080827	1953..2579	3120	99.8	Plus
chrX	22417052	chrX	17081977..17082481	3532..4036	2525	100	Plus
chrX	22417052	chrX	17080883..17081166	2574..2857	1420	100	Plus
chrX	22417052	chrX	17050404..17050660	1..257	1285	100	Plus

Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:01:09 has no hits.

Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:48:06

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23542271	X	17188990..17190687	256..1953	8490	100	Plus
X	23542271	X	17193897..17195316	4035..5454	7100	100	Plus
X	23542271	X	17191788..17192461	2858..3531	3370	100	Plus
X	23542271	X	17190755..17191381	1953..2579	3120	99.8	Plus
X	23542271	X	17192531..17193035	3532..4036	2525	100	Plus
X	23542271	X	17191437..17191720	2574..2857	1420	100	Plus
X	23542271	X	17160935..17161191	1..257	1285	100	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:20:22

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23527363	X	17197088..17198785	256..1953	8490	100	Plus
X	23527363	X	17201995..17203414	4035..5454	7100	100	Plus
X	23527363	X	17199886..17200559	2858..3531	3370	100	Plus
X	23527363	X	17198853..17199479	1953..2579	3120	99.8	Plus
X	23527363	X	17200629..17201133	3532..4036	2525	100	Plus
X	23527363	X	17199535..17199818	2574..2857	1420	100	Plus
X	23527363	X	17169033..17169289	1..257	1285	100	Plus
2R	25260384	2R	5875491..5875553	5454..5392	315	100	Minus
Unmapped_scaffold_08	88768	Unmapped_scaffold_08	51614..51676	5392..5454	315	100	Plus
X	23527363	X	11192402..11192461	5395..5454	300	100	Plus
X	23527363	X	23446859..23446918	5395..5454	300	100	Plus
2R	25260384	2R	22965005..22965064	5454..5395	300	100	Minus
2R	25260384	2R	7868486..7868545	5454..5395	300	100	Minus
3R	31820162	3R	9586399..9586458	5395..5454	300	100	Plus
3R	31820162	3R	23953061..23953120	5454..5395	300	100	Minus
2L	23513712	2L	20412836..20412895	5454..5395	300	100	Minus
Unmapped_scaffold_04	86267	Unmapped_scaffold_04	27973..28032	5454..5395	300	100	Minus
3L	28103327	3L	21149988..21150047	5454..5395	300	100	Minus
X	23527363	X	17208109..17208167	5396..5454	295	100	Plus
X	23527363	X	23451611..23451669	5396..5454	295	100	Plus
X	23527363	X	11197151..11197209	5396..5454	295	100	Plus
X	23527363	X	17801322..17801380	5454..5396	295	100	Minus
X	23527363	X	326842..326900	5454..5396	295	100	Minus
2R	25260384	2R	11302859..11302917	5396..5454	295	100	Plus
2R	25260384	2R	11298871..11298929	5396..5454	295	100	Plus
2R	25260384	2R	23408824..23408882	5454..5396	295	100	Minus
2R	25260384	2R	23404076..23404134	5454..5396	295	100	Minus
2R	25260384	2R	22960252..22960310	5454..5396	295	100	Minus
2R	25260384	2R	7863733..7863791	5454..5396	295	100	Minus
2R	25260384	2R	6585998..6586056	5454..5396	295	100	Minus
2R	25260384	2R	6581245..6581303	5454..5396	295	100	Minus
3R	31820162	3R	9591153..9591211	5396..5454	295	100	Plus
3R	31820162	3R	23948313..23948371	5454..5396	295	100	Minus
2L	23513712	2L	20010888..20010946	5454..5396	295	100	Minus
2L	23513712	2L	20006140..20006198	5454..5396	295	100	Minus
Unmapped_scaffold_08	88768	Unmapped_scaffold_08	56366..56424	5396..5454	295	100	Plus
Unmapped_scaffold_04	86267	Unmapped_scaffold_04	23220..23278	5454..5396	295	100	Minus
3L	28103327	3L	21145236..21145294	5454..5396	295	100	Minus
Unimproved_211000022210930_95_658	563	Unimproved_211000022210930_95_658	129..187	5454..5396	295	100	Minus
Unimproved_211000022214690_84_763	679	Unimproved_211000022214690_84_763	61..119	5396..5454	295	100	Plus
X	23527363	X	12393593..12393651	5396..5454	280	98.3	Plus
X	23527363	X	12390023..12390081	5396..5454	280	98.3	Plus

Blast to na_te.dros performed 2019-03-15 20:48:07

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6785..6899	3951..4065	142	60.3	Plus

LD13977.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:48:53 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chrX	17050404..17050660	1..257	100	->	Plus
chrX	17078438..17080132	258..1952	100	->	Plus
chrX	17080201..17080823	1953..2575	100	->	Plus
chrX	17080885..17080954	2576..2645	100	==	Plus
chrX	17081007..17081166	2698..2857	100	->	Plus
chrX	17081234..17081907	2858..3531	100	->	Plus
chrX	17081977..17082222	3532..3777	100	==	Plus
chrX	17082291..17082481	3846..4036	100	->	Plus
chrX	17083345..17084701	4037..5393	94	->	Plus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:49:54 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
baz-RA	1..4395	138..4532	100		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:02:16 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
baz-RA	1..4395	138..4532	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:23:12 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
baz-RA	1..4395	138..4532	100		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:51:38 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
baz-RA	1..4395	138..4532	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:30:39 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
baz-RA	1..4395	138..4532	100		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:49:53 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
baz-RA	907..6357	1..5451	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:02:16 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
baz-RA	907..6357	1..5451	100		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:23:12 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
baz-RA	930..6380	1..5451	100		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:51:38 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
baz-RA	907..6357	1..5451	100		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:30:39 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
baz-RA	930..6380	1..5451	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:48:53 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	17160935..17161191	1..257	100	->	Plus
X	17188992..17190686	258..1952	100	->	Plus
X	17190755..17191377	1953..2575	100	->	Plus
X	17191439..17191720	2576..2857	100	->	Plus
X	17191788..17192461	2858..3531	100	->	Plus
X	17192531..17193035	3532..4036	100	->	Plus
X	17193899..17195313	4037..5451	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:48:53 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	17160935..17161191	1..257	100	->	Plus
X	17188992..17190686	258..1952	100	->	Plus
X	17190755..17191377	1953..2575	100	->	Plus
X	17191439..17191720	2576..2857	100	->	Plus
X	17191788..17192461	2858..3531	100	->	Plus
X	17192531..17193035	3532..4036	100	->	Plus
X	17193899..17195313	4037..5451	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:48:53 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	17160935..17161191	1..257	100	->	Plus
X	17188992..17190686	258..1952	100	->	Plus
X	17190755..17191377	1953..2575	100	->	Plus
X	17191439..17191720	2576..2857	100	->	Plus
X	17191788..17192461	2858..3531	100	->	Plus
X	17192531..17193035	3532..4036	100	->	Plus
X	17193899..17195313	4037..5451	100		Plus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:23:12 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_X	17054968..17055224	1..257	100	->	Plus
arm_X	17083025..17084719	258..1952	100	->	Plus
arm_X	17084788..17085410	1953..2575	100	->	Plus
arm_X	17085472..17085753	2576..2857	100	->	Plus
arm_X	17085821..17086494	2858..3531	100	->	Plus
arm_X	17086564..17087068	3532..4036	100	->	Plus
arm_X	17087932..17089346	4037..5451	100		Plus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:29:57 Download gff for LD13977.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	17199537..17199818	2576..2857	100	->	Plus
X	17169033..17169289	1..257	100	->	Plus
X	17197090..17198784	258..1952	100	->	Plus
X	17198853..17199475	1953..2575	100	->	Plus
X	17199886..17200559	2858..3531	100	->	Plus
X	17200629..17201133	3532..4036	100	->	Plus
X	17201997..17203411	4037..5451	100		Plus

LD13977.pep Sequence

Translation from 137 to 4531

> LD13977.pep
MKVTVCFGDVRILVPCGSGELLVRDLVKEATRRYIKAAGKPDSWVTVTHL
QTQSGILDPDDCVRDVADDREQILAHFDDPGPDPGVPQGGGDGASGSSSV
GTGSPDIFRDPTNTEAPTCPRDLSTPHIEVTSTTSGPMAGLGVGLMVRRS
SDPNLLASLKAEGSNKRWSAAAPHYAGGDSPERLFLDKAGGQLSPQWEED
DDPSHQLKEQLLHQQQPHAANGGSSSGNHQPFARSGRLSMQFLGDGNGYK
WMEAAEKLQNQPPAQQTYQQGSHHAGHGQNGAYSSKSLPRESKRKEPLGQ
AYESIREKDGEMLLIINEYGSPLGLTALPDKEHGGGLLVQHVEPGSRAER
GRLRRDDRILEINGIKLIGLTESQVQEQLRRALESSELRVRVLRGDRNRR
QQRDSKVAEMVEVATVSPTRKPHAAPVGTSLQVANTRKLGRKIEIMLKKG
PNGLGFSVTTRDNPAGGHCPIYIKNILPRGAAIEDGRLKPGDRLLEVDGT
PMTGKTQTDVVAILRGMPAGATVRIVVSRQQELAEQADQPAEKSAGVAVA
PSVAPPAVPAAAAPAPPIPVQKSSSARSLFTHQQQSQLNESQHFIDAGSE
SAASNDSLPPSSNSWHSREELTLHIPVHDTEKAGLGVSVKGKTCSNLNAS
GSSASSGSNGLMKHDGDLGIFVKNVIHGGAASRDGRLRMNDQLLSVNGVS
LRGQNNAEAMETLRRAMVNTPGKHPGTITLLVGRKILRSASSSDILDHSN
SHSHSHSNSSGGSNSNGSGNNNNSSSNASDNSGATVIYLSPEKREQRCNG
GGGGGSAGNEMNRWSNPVLDRLTGGICSSNSAQPSSQQSHQQQPHPSQQQ
QQQRRLPAAPVCSSAALRNESYYMATNDNWSPAQMHLMTAHGNTALLIED
DAEPMSPTLPARPHDGQHCNTSSANPSQNLAVGNQGPPINTVPGTPSTSS
NFDATYSSQLSLETNSGVEHFSRDALGRRSISEKHHAALDARETGTYQRN
KKLREERERERRIQLTKSAVYGGSIESLTARIASANAQFSGYKHAKTASS
IEQRETQQQLAAAEAEARDQLGDLGPSLGMKKSSSLESLQTMVQELQMSD
EPRGHQALRAPRGRGREDSLRAAVVSEPDASKPRKTWLLEDGDHEGGFAS
QRNGPFQSSLNDGKHGCKSSRAKKPSILRGIGHMFRFGKNRKDGVVPVDN
YAVNISPPTSVVSTATSPQLQQQQQQQLQQHQQQQQIPTAALAALERNGK
PPAYQPPPPLPAPNGVGSNGIHQNDIFNHRYQHYANYEDLHQQHQQHQIS
RRHQHYHSQRSARSQDVSMHSTSSGSQPGSLAQPQAQSNGVRPMSSYYEY
ETVQQQRVGSIKHSHSSSATSSSSSPINVPHWKAAAMNGYSPASLNSSAR
SRGPFVTQVTIREQSSGGIPAHLLQQHQQQQLQQQQPTYQTVQKMSGPSQ
YGSAAGSQPHASKV*

LD13977.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:41:28

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF22322-PA	1476	GF22322-PA	1..1476	1..1464	5582	83.9	Plus
Dana\GF24839-PA	871	GF24839-PA	150..391	445..716	185	28.2	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:41:31

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG19100-PA	1469	GG19100-PA	1..1469	1..1464	7565	97.6	Plus
Dere\GG14826-PA	871	GG14826-PA	150..391	445..716	194	29.1	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:41:36

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH12056-PA	1601	GH12056-PA	63..1601	42..1464	4730	73.3	Plus
Dgri\GH12055-PA	68	GH12055-PA	1..40	1..40	193	87.5	Plus
Dgri\GH16435-PA	863	GH16435-PA	140..381	445..716	186	29.5	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:12:59

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
baz-PA	1464	CG5055-PA	1..1464	1..1464	7601	100	Plus
baz-PC	1499	CG5055-PC	1..1499	1..1464	7555	97.7	Plus
baz-PD	1485	CG5055-PD	61..1485	40..1464	7403	100	Plus
baz-PB	1520	CG5055-PB	61..1520	40..1464	7357	97.6	Plus
dlg1-PK	911	CG1725-PK	11..523	164..731	225	24	Plus
dlg1-PL	946	CG1725-PL	111..531	256..731	215	25.4	Plus
Patj-PB	871	CG12021-PB	150..391	445..716	214	28.6	Plus
Patj-PA	871	CG12021-PA	150..391	445..716	214	28.6	Plus
Patj-PC	871	CG12021-PC	150..391	445..716	214	28.6	Plus
dlg1-PH	911	CG1725-PH	105..523	254..731	214	25.3	Plus
dlg1-PB	970	CG1725-PB	164..582	254..731	214	25.3	Plus
dlg1-PM	1030	CG1725-PM	402..820	254..731	214	25.3	Plus
Smr-PF	3601	CG4013-PF	123..365	1212..1459	183	28.3	Plus
Smr-PE	3601	CG4013-PE	123..365	1212..1459	183	28.3	Plus
Smr-PD	3601	CG4013-PD	123..365	1212..1459	183	28.3	Plus
Smr-PG	3607	CG4013-PG	123..371	1212..1459	179	28.4	Plus
cno-PH	1968	CG42312-PH	1037..1232	668..858	176	29.2	Plus
pros-PK	1535	CG17228-PK	905..1326	912..1334	174	21.5	Plus
pros-PI	1835	CG17228-PI	1205..1626	912..1334	174	21.5	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:41:41

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI16958-PA	500	GI16958-PA	13..494	42..535	2122	88.7	Plus
Dmoj\GI15543-PA	291	GI15543-PA	1..198	620..813	613	77.7	Plus
Dmoj\GI15542-PA	63	GI15542-PA	1..44	1..44	201	81.8	Plus
Dmoj\GI12519-PA	857	GI12519-PA	141..382	445..716	189	29.1	Plus
Dmoj\GI16183-PA	787	GI16183-PA	68..262	313..516	162	29.2	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:41:44

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL19872-PA	1204	GL19872-PA	89..1204	400..1464	3580	74.4	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:41:48

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA18624-PA	1512	GA18624-PA	1..1512	1..1464	5381	80	Plus
Dpse\GA11344-PA	879	GA11344-PA	153..394	445..716	188	28.8	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:41:51

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM13492-PA	589	GM13492-PA	1..570	1..570	3014	99.1	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:41:53

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD17331-PA	936	GD17331-PA	61..901	40..907	4329	95.3	Plus
Dsim\GD17332-PA	207	GD17332-PA	9..173	1300..1464	632	94.5	Plus
Dsim\GD13649-PA	871	GD13649-PA	150..391	445..716	197	29.1	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:41:58

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ14885-PA	1460	GJ14885-PA	3..1460	42..1464	4899	76.8	Plus
Dvir\GJ12423-PA	865	GJ12423-PA	140..381	445..716	188	29.1	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:42:02

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK25801-PA	1487	GK25801-PA	1..1487	1..1464	5252	78.4	Plus
Dwil\GK20329-PA	867	GK20329-PA	152..394	445..716	205	29.5	Plus
Dwil\GK15791-PA	631	GK15791-PA	74..265	313..515	160	28.2	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:42:05

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE17646-PA	1475	GE17646-PA	1..1475	1..1464	7609	97.9	Plus
Dyak\GE21190-PA	871	GE21190-PA	150..391	445..716	197	29.1	Plus

LD13977.hyp Sequence

Translation from 137 to 4531

> LD13977.hyp
MKVTVCFGDVRILVPCGSGELLVRDLVKEATRRYIKAAGKPDSWVTVTHL
QTQSGILDPDDCVRDVADDREQILAHFDDPGPDPGVPQGGGDGASGSSSV
GTGSPDIFRDPTNTEAPTCPRDLSTPHIEVTSTTSGPMAGLGVGLMVRRS
SDPNLLASLKAEGSNKRWSAAAPHYAGGDSPERLFLDKAGGQLSPQWEED
DDPSHQLKEQLLHQQQPHAANGGSSSGNHQPFARSGRLSMQFLGDGNGYK
WMEAAEKLQNQPPAQQTYQQGSHHAGHGQNGAYSSKSLPRESKRKEPLGQ
AYESIREKDGEMLLIINEYGSPLGLTALPDKEHGGGLLVQHVEPGSRAER
GRLRRDDRILEINGIKLIGLTESQVQEQLRRALESSELRVRVLRGDRNRR
QQRDSKVAEMVEVATVSPTRKPHAAPVGTSLQVANTRKLGRKIEIMLKKG
PNGLGFSVTTRDNPAGGHCPIYIKNILPRGAAIEDGRLKPGDRLLEVDGT
PMTGKTQTDVVAILRGMPAGATVRIVVSRQQELAEQADQPAEKSAGVAVA
PSVAPPAVPAAAAPAPPIPVQKSSSARSLFTHQQQSQLNESQHFIDAGSE
SAASNDSLPPSSNSWHSREELTLHIPVHDTEKAGLGVSVKGKTCSNLNAS
GSSASSGSNGLMKHDGDLGIFVKNVIHGGAASRDGRLRMNDQLLSVNGVS
LRGQNNAEAMETLRRAMVNTPGKHPGTITLLVGRKILRSASSSDILDHSN
SHSHSHSNSSGGSNSNGSGNNNNSSSNASDNSGATVIYLSPEKREQRCNG
GGGGGSAGNEMNRWSNPVLDRLTGGICSSNSAQPSSQQSHQQQPHPSQQQ
QQQRRLPAAPVCSSAALRNESYYMATNDNWSPAQMHLMTAHGNTALLIED
DAEPMSPTLPARPHDGQHCNTSSANPSQNLAVGNQGPPINTVPGTPSTSS
NFDATYSSQLSLETNSGVEHFSRDALGRRSISEKHHAALDARETGTYQRN
KKLREERERERRIQLTKSAVYGGSIESLTARIASANAQFSGYKHAKTASS
IEQRETQQQLAAAEAEARDQLGDLGPSLGMKKSSSLESLQTMVQELQMSD
EPRGHQALRAPRGRGREDSLRAAVVSEPDASKPRKTWLLEDGDHEGGFAS
QRNGPFQSSLNDGKHGCKSSRAKKPSILRGIGHMFRFGKNRKDGVVPVDN
YAVNISPPTSVVSTATSPQLQQQQQQQLQQHQQQQQIPTAALAALERNGK
PPAYQPPPPLPAPNGVGSNGIHQNDIFNHRYQHYANYEDLHQQHQQHQIS
RRHQHYHSQRSARSQDVSMHSTSSGSQPGSLAQPQAQSNGVRPMSSYYEY
ETVQQQRVGSIKHSHSSSATSSSSSPINVPHWKAAAMNGYSPASLNSSAR
SRGPFVTQVTIREQSSGGIPAHLLQQHQQQQLQQQQPTYQTVQKMSGPSQ
YGSAAGSQPHASKV*

LD13977.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:55:13

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
baz-PA	1464	CG5055-PA	1..1464	1..1464	7601	100	Plus
baz-PC	1499	CG5055-PC	1..1499	1..1464	7555	97.7	Plus
baz-PD	1485	CG5055-PD	61..1485	40..1464	7403	100	Plus
baz-PB	1520	CG5055-PB	61..1520	40..1464	7357	97.6	Plus
Patj-PB	871	CG12021-PB	150..391	445..716	214	28.6	Plus

Library:	LD
Tissue Source:	Drosophila melanogaster embryo
Created by:	Ling Hong
Date Registered:	1997-12-04
Comments:	Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:	139
Well:	77
Vector:	pBS SK-
Associated Gene/Transcript	baz-RA
Protein status:	LD13977.pep: gold
Sequenced Size:	5473

Clone LD13977 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

LD13977.complete Sequence

LD13977.complete Blast Records

LD13977.complete Sim4 Records

LD13977.pep Sequence

LD13977.pep Blast Records

LD13977.hyp Sequence

LD13977.hyp Blast Records