BDGP Sequence Production Resources |
Search the DGRC for LD14049
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 140 |
Well: | 49 |
Vector: | pBS SK- |
Associated Gene/Transcript | SmB-RB |
Protein status: | LD14049.pep: gold |
Preliminary Size: | 1141 |
Sequenced Size: | 959 |
Gene | Date | Evidence |
---|---|---|
CG5352 | 2001-01-01 | Release 2 assignment |
CG5352 | 2001-10-10 | Blastp of sequenced clone |
CG5352 | 2003-01-01 | Sim4 clustering to Release 3 |
SmB | 2008-04-29 | Release 5.5 accounting |
SmB | 2008-08-15 | Release 5.9 accounting |
SmB | 2008-12-18 | 5.12 accounting |
959 bp (959 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061171
> LD14049.complete AAAAAACATACTGATTCAAATTTTTTCTTTTTTCGTTTTTTATCATAAGA TTTAAAAAAAATTTAATTTTTTTCTCTTCTTTTGCTAGGGATAGTCGAAT GTTTGTTTAAAAAATCATGTGGATTATCAATAAAAAATTTATATTCGATA GGCTCGATTGAAAGACACCAGAAAATGCTGACCGCCGCACACGCCACTCG ATTTATTCTTCATGCCTATCGAAAAAAGCCGTGGTGAGGTTCCGGCATCT GTATTTTATTTACAAGCGATAGAATTAACATAGAAATCAAATAAAATGAC GATCGGCAAGAACAACAAAATGATTCAGCACCTGAATTATCGGGTGCGAA TCGTGCTGCAGGACTCGCGTACCTTCATCGGTACCTTCAAAGCCTTCGAC AAACACATGAACTTGATCCTCGGCGACTGCGAGGAGTTCCGGAAGATTCG CTCGAAGAATTCCAAGGTGCCCGAGCGCGAGGAGAAGCGCGTGCTGGGCT TTGTATTGCTGCGCGGCGAGAACATAGTTTCACTGACGGTGGAGGGACCA CCGCCGCCAGAGGAGGGCCTGCCCCGAGTTCCCATTCCGGGAGCAGCTCC TGGTCCGGGAATCGGTCGCGTGGCCGGACGCGGAATGCCTATCAACTTGT CCGCCGTGCCAGCGGGTCTCCAGGGTCCCGTGAGAGGTGTGGGCGGACCC GCCCAACAGCACATGGCTCCGATGGGACGAGGAGTGCCACGAGCACCGAT GATGGGTGCACCGCCACCGGGCATGATTCCCGGCGGCATGCCCTCGATGC CAGGAAACATGGGACGCGGTGCTCCGCCACCGATGCGCGGACCGCCGCCC AGCATGATCCGTGGAGCACCACCACCGGGCAGGGGTGGCTATTAAGTATA AAGTACAATCTAATAAAAACTCATTTAGAAAACACCACTTAAAAAAAAAA AAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10424314..10424955 | 299..940 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SmB-RA | 1..600 | 296..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SmB-RA | 1..600 | 296..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SmB-RB | 1..600 | 296..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SmB-RA | 1..600 | 296..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SmB-RB | 1..600 | 296..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SmB-RA | 1..940 | 1..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SmB-RA | 1..940 | 1..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SmB-RB | 1..776 | 165..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SmB-RA | 1..940 | 1..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SmB-RB | 1..776 | 165..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10425483..10426124 | 299..940 | 100 | <- | Minus |
2L | 10426494..10426791 | 1..298 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10425483..10426124 | 299..940 | 100 | <- | Minus |
2L | 10426494..10426791 | 1..298 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10425483..10426124 | 299..940 | 100 | <- | Minus |
2L | 10426494..10426791 | 1..298 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10425483..10426124 | 299..940 | 100 | <- | Minus |
arm_2L | 10426494..10426791 | 1..298 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10425483..10426124 | 299..940 | 100 | <- | Minus |
2L | 10426494..10426791 | 1..298 | 100 | Minus |
Translation from 295 to 894
> LD14049.hyp MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRK IRSKNSKVPEREEKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGA APGPGIGRVAGRGMPINLSAVPAGLQGPVRGVGGPAQQHMAPMGRGVPRA PMMGAPPPGMIPGGMPSMPGNMGRGAPPPMRGPPPSMIRGAPPPGRGGY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SmB-PB | 199 | CG5352-PB | 1..199 | 1..199 | 1069 | 100 | Plus |
Translation from 295 to 894
> LD14049.pep MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRK IRSKNSKVPEREEKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGA APGPGIGRVAGRGMPINLSAVPAGLQGPVRGVGGPAQQHMAPMGRGVPRA PMMGAPPPGMIPGGMPSMPGNMGRGAPPPMRGPPPSMIRGAPPPGRGGY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14098-PA | 199 | GF14098-PA | 1..199 | 1..199 | 833 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23931-PA | 199 | GG23931-PA | 1..199 | 1..199 | 973 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13302-PA | 198 | GH13302-PA | 1..198 | 1..199 | 799 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SmB-PB | 199 | CG5352-PB | 1..199 | 1..199 | 1069 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18165-PA | 198 | GI18165-PA | 1..198 | 1..199 | 800 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19145-PA | 205 | GL19145-PA | 8..205 | 2..199 | 822 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18820-PA | 191 | GA18820-PA | 1..191 | 9..199 | 781 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11667-PA | 199 | GM11667-PA | 1..199 | 1..199 | 972 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22258-PA | 199 | GD22258-PA | 1..199 | 1..199 | 972 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14598-PA | 198 | GJ14598-PA | 1..198 | 1..199 | 800 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14876-PA | 191 | GK14876-PA | 1..191 | 9..199 | 778 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\SmB-PA | 199 | GE25943-PA | 1..199 | 1..199 | 973 | 99 | Plus |