BDGP Sequence Production Resources |
Search the DGRC for LD14109
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 141 |
Well: | 9 |
Vector: | pBS SK- |
Associated Gene/Transcript | AP-1sigma-RA |
Protein status: | LD14109.pep: gold |
Preliminary Size: | 1295 |
Sequenced Size: | 1079 |
Gene | Date | Evidence |
---|---|---|
CG5864 | 2001-01-01 | Release 2 assignment |
CG5864 | 2001-10-10 | Blastp of sequenced clone |
CG5864 | 2003-01-01 | Sim4 clustering to Release 3 |
AP-1sigma | 2008-04-29 | Release 5.5 accounting |
AP-1sigma | 2008-08-15 | Release 5.9 accounting |
AP-1sigma | 2008-12-18 | 5.12 accounting |
1079 bp (1079 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061172
> LD14109.complete CTCGCTGGCTGCATGGAAAAATAAGATTTTTCCATATATTTTGTAATCCC AGCCCACGGAAAAACTTCACCACACAGAGAAAAACAAAAATAAATGATGC TTTTCATGCTGCTGTTTAGTCGGCAGGGCAAACTGCGGTTACAAAAGTGG TACATGGCCTATCCGGATAAGGTGAAAAAGAAGATCACCCGGGAACTGGT CACTACGATACTGGCCCGCAAGCCCAAAATGTGCTCCTTTCTGGAGTGGA AGGACTGCAAAATTGTCTACAAAAGGTATGCCAGCTTGTATTTCTGTTGC GCCATCGAGCAGAACGACAACGAACTGCTGACACTGGAGATCATTCATCG CTATGTGGAGCTGTTGGATAAGTACTTCGGCAGCGTCTGCGAGCTGGACA TTATCTTTAACTTTGAAAAAGCATACTTTATCCTGGATGAGCTGCTCATT GGCGGCGAAATCCAGGAGACGTCCAAAAAGAACGTACTTAAGGCGATTGC CTCGCAGGATCTGCTCCAAGAGGATGAGACCCCGCAGAGTTTCTTCGACG ATCACGGCCTGGGCTAAGTTGGCTCTATGCAAAAGTAACGCCAGAAAGGC ATTATCTATATTGAACCCATTTAAAGTCGCCTTAATTGTATGTGTATTTA ACGTAACCCAAAAGTATACCGGTTCTATTGTAATTTAACCACCCTGTGTC AGCATAAAAAACATTGTGTATAGAAGTGCTGTTAAACCTATTCCTAATTT CGCTTGGCAAATGCAATTTGCAATACATTTAATTTCACAAAAAAGCATCA ATATCGGTTGCTCACACACGTTCATATTTGTAAAGATTAACTTAATGATA AGCAAAGTAAAGCGATGCGATTAATCGACGGTGTGCTCAACTCTATAGTT GTAAGTTAAAAGCCCTATAAATATATAAAAATTGCTGTATCCAAAGTAAC CAATCAAAACTCTGTTTACTTTATGCATTCTTTGCTGCAAATAAAGATGG TATCGAGCGTGAGAGTTTTTTTTTTTCAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
AP-1sigma-RA | 1193 | AP-1sigma-RA | 145..1172 | 1..1028 | 5110 | 99.8 | Plus |
AP-1sigma.a | 1272 | AP-1sigma.a | 145..668 | 1..524 | 2620 | 100 | Plus |
AP-1sigma.b | 1037 | AP-1sigma.b | 176..697 | 1..522 | 2610 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19785428..19785934 | 521..1027 | 2505 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 19782410..19782591 | 96..277 | 910 | 100 | Plus |
chr3R | 27901430 | chr3R | 19782835..19782973 | 385..523 | 695 | 100 | Plus |
chr3R | 27901430 | chr3R | 19782657..19782769 | 274..386 | 565 | 100 | Plus |
chr3R | 27901430 | chr3R | 19782082..19782177 | 1..96 | 480 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23962049..23962556 | 521..1028 | 2510 | 99.6 | Plus |
3R | 32079331 | 3R | 23959031..23959212 | 96..277 | 910 | 100 | Plus |
3R | 32079331 | 3R | 23959456..23959594 | 385..523 | 695 | 100 | Plus |
3R | 32079331 | 3R | 23959278..23959390 | 274..386 | 565 | 100 | Plus |
3R | 32079331 | 3R | 23958703..23958798 | 1..96 | 480 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23702880..23703387 | 521..1028 | 2510 | 99.6 | Plus |
3R | 31820162 | 3R | 23699862..23700043 | 96..277 | 910 | 100 | Plus |
3R | 31820162 | 3R | 23700287..23700425 | 385..523 | 695 | 100 | Plus |
3R | 31820162 | 3R | 23700109..23700221 | 274..386 | 565 | 100 | Plus |
3R | 31820162 | 3R | 23699534..23699629 | 1..96 | 480 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19782082..19782177 | 1..96 | 100 | -> | Plus |
chr3R | 19782411..19782589 | 97..275 | 100 | -> | Plus |
chr3R | 19782659..19782767 | 276..384 | 100 | -> | Plus |
chr3R | 19782835..19782972 | 385..522 | 100 | -> | Plus |
chr3R | 19785430..19785934 | 523..1027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
AP-1sigma-RA | 1..474 | 94..567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
AP-1sigma-RA | 1..474 | 94..567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
AP-1sigma-RA | 1..474 | 94..567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
AP-1sigma-RA | 1..474 | 94..567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
AP-1sigma-RA | 1..474 | 94..567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
AP-1sigma-RA | 50..1076 | 1..1027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
AP-1sigma-RA | 50..1076 | 1..1027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
AP-1sigma-RA | 53..1079 | 1..1027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
AP-1sigma-RA | 50..1076 | 1..1027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
AP-1sigma-RA | 53..1079 | 1..1027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23958703..23958798 | 1..96 | 100 | -> | Plus |
3R | 23959032..23959210 | 97..275 | 100 | -> | Plus |
3R | 23959280..23959388 | 276..384 | 100 | -> | Plus |
3R | 23959456..23959593 | 385..522 | 100 | -> | Plus |
3R | 23962051..23962555 | 523..1027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23958703..23958798 | 1..96 | 100 | -> | Plus |
3R | 23959032..23959210 | 97..275 | 100 | -> | Plus |
3R | 23959280..23959388 | 276..384 | 100 | -> | Plus |
3R | 23959456..23959593 | 385..522 | 100 | -> | Plus |
3R | 23962051..23962555 | 523..1027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23958703..23958798 | 1..96 | 100 | -> | Plus |
3R | 23959032..23959210 | 97..275 | 100 | -> | Plus |
3R | 23959280..23959388 | 276..384 | 100 | -> | Plus |
3R | 23959456..23959593 | 385..522 | 100 | -> | Plus |
3R | 23962051..23962555 | 523..1027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19784425..19784520 | 1..96 | 100 | -> | Plus |
arm_3R | 19784754..19784932 | 97..275 | 100 | -> | Plus |
arm_3R | 19785002..19785110 | 276..384 | 100 | -> | Plus |
arm_3R | 19785178..19785315 | 385..522 | 100 | -> | Plus |
arm_3R | 19787773..19788277 | 523..1027 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23702882..23703386 | 523..1027 | 99 | Plus | |
3R | 23699534..23699629 | 1..96 | 100 | -> | Plus |
3R | 23699863..23700041 | 97..275 | 100 | -> | Plus |
3R | 23700111..23700219 | 276..384 | 100 | -> | Plus |
3R | 23700287..23700424 | 385..522 | 100 | -> | Plus |
Translation from 93 to 566
> LD14109.pep MMLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFL EWKDCKIVYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCE LDIIFNFEKAYFILDELLIGGEIQETSKKNVLKAIASQDLLQEDETPQSF FDDHGLG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17027-PA | 156 | GF17027-PA | 1..156 | 2..157 | 821 | 100 | Plus |
Dana\GF17262-PA | 142 | GF17262-PA | 1..142 | 1..142 | 365 | 46.5 | Plus |
Dana\GF12884-PA | 191 | GF12884-PA | 1..152 | 1..146 | 255 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11239-PA | 156 | GG11239-PA | 1..156 | 2..157 | 821 | 100 | Plus |
Dere\GG14749-PA | 142 | GG14749-PA | 1..142 | 1..142 | 365 | 46.5 | Plus |
Dere\GG22912-PA | 191 | GG22912-PA | 1..152 | 1..146 | 253 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11883-PA | 156 | GH11883-PA | 1..156 | 2..157 | 818 | 99.4 | Plus |
Dgri\GH18926-PA | 122 | GH18926-PA | 1..122 | 21..142 | 304 | 45.1 | Plus |
Dgri\GH21700-PA | 191 | GH21700-PA | 1..152 | 1..146 | 254 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
AP-1sigma-PA | 157 | CG5864-PA | 1..157 | 1..157 | 821 | 100 | Plus |
AP-1sigma-PC | 157 | CG5864-PC | 1..156 | 1..156 | 761 | 94.9 | Plus |
AP-1sigma-PB | 157 | CG5864-PB | 1..156 | 1..156 | 761 | 94.9 | Plus |
AP-1sigma-PD | 152 | CG5864-PD | 1..145 | 1..145 | 746 | 99.3 | Plus |
AP-2sigma-PA | 142 | CG6056-PA | 1..142 | 1..142 | 366 | 46.5 | Plus |
or-PA | 191 | CG3029-PA | 1..151 | 1..145 | 262 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24137-PA | 157 | GI24137-PA | 1..157 | 1..157 | 823 | 99.4 | Plus |
Dmoj\GI10836-PA | 141 | GI10836-PA | 3..141 | 4..142 | 361 | 46.8 | Plus |
Dmoj\GI20707-PA | 191 | GI20707-PA | 1..152 | 1..146 | 256 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23383-PA | 157 | GL23383-PA | 1..157 | 1..157 | 826 | 100 | Plus |
Dper\GL27163-PA | 142 | GL27163-PA | 1..142 | 1..142 | 365 | 46.5 | Plus |
Dper\GL11643-PA | 191 | GL11643-PA | 1..152 | 1..146 | 253 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19188-PA | 157 | GA19188-PA | 1..157 | 1..157 | 826 | 100 | Plus |
Dpse\GA19327-PA | 142 | GA19327-PA | 1..142 | 1..142 | 365 | 46.5 | Plus |
Dpse\GA15753-PA | 191 | GA15753-PA | 1..152 | 1..146 | 253 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26541-PA | 156 | GM26541-PA | 1..156 | 2..157 | 821 | 100 | Plus |
Dsec\GM15088-PA | 142 | GM15088-PA | 1..142 | 1..142 | 365 | 46.5 | Plus |
Dsec\GM16073-PA | 188 | GM16073-PA | 1..152 | 1..146 | 253 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21048-PA | 156 | GD21048-PA | 1..156 | 2..157 | 821 | 100 | Plus |
Dsim\GD19995-PA | 142 | GD19995-PA | 1..142 | 1..142 | 365 | 46.5 | Plus |
Dsim\GD11816-PA | 191 | GD11816-PA | 1..152 | 1..146 | 253 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24652-PA | 156 | GJ24652-PA | 1..156 | 2..157 | 818 | 99.4 | Plus |
Dvir\GJ14442-PA | 142 | GJ14442-PA | 1..142 | 1..142 | 365 | 46.5 | Plus |
Dvir\GJ19697-PA | 191 | GJ19697-PA | 1..152 | 1..146 | 256 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11486-PA | 156 | GK11486-PA | 1..156 | 2..157 | 821 | 100 | Plus |
Dwil\GK12771-PA | 142 | GK12771-PA | 1..142 | 1..142 | 365 | 46.5 | Plus |
Dwil\GK15725-PA | 191 | GK15725-PA | 1..152 | 1..146 | 255 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23431-PA | 156 | GE23431-PA | 1..156 | 2..157 | 821 | 100 | Plus |
Dyak\AP-2sigma-PA | 142 | GE25002-PA | 1..142 | 1..142 | 365 | 46.5 | Plus |
Dyak\GE14351-PA | 191 | GE14351-PA | 1..152 | 1..146 | 253 | 33.6 | Plus |
Translation from 93 to 566
> LD14109.hyp MMLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFL EWKDCKIVYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCE LDIIFNFEKAYFILDELLIGGEIQETSKKNVLKAIASQDLLQEDETPQSF FDDHGLG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
AP-1sigma-PA | 157 | CG5864-PA | 1..157 | 1..157 | 821 | 100 | Plus |
AP-1sigma-PC | 157 | CG5864-PC | 1..156 | 1..156 | 761 | 94.9 | Plus |
AP-1sigma-PB | 157 | CG5864-PB | 1..156 | 1..156 | 761 | 94.9 | Plus |
AP-1sigma-PD | 152 | CG5864-PD | 1..145 | 1..145 | 746 | 99.3 | Plus |
AP-2sigma-PA | 142 | CG6056-PA | 1..142 | 1..142 | 366 | 46.5 | Plus |