BDGP Sequence Production Resources |
Search the DGRC for LD14168
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 141 |
Well: | 68 |
Vector: | pBS SK- |
Associated Gene/Transcript | Cpsf100-RA |
Protein status: | LD14168.pep: gold |
Preliminary Size: | 2403 |
Sequenced Size: | 2387 |
Gene | Date | Evidence |
---|---|---|
CG1957 | 2001-01-01 | Release 2 assignment |
CG1957 | 2002-12-11 | Blastp of sequenced clone |
CG1957 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1957 | 2008-04-29 | Release 5.5 accounting |
CG1957 | 2008-08-15 | Release 5.9 accounting |
CG1957 | 2008-12-18 | 5.12 accounting |
2387 bp (2387 high quality bases) assembled on 2002-12-11
GenBank Submission: AF160933
> LD14168.complete TGGTTTAATTGGCAAAAATGACCTCCATTATCAAGCTGCACACTATATCT GGGGCGATGGACGAGTCCCCGCCATGCTATATCCTACAGATAGACGATGT GCGGATATTACTTGACTGCGGATGGGACGAAAAGTTCGATGCCAACTTTA TCAAGGAACTGAAGAGGCAGGTGCACACCCTGGACGCCGTGCTGCTATCC CATCCGGATGCATATCATCTTGGAGCCCTGCCATACTTGGTGGGCAAGCT GGGGCTCAATTGCCCCATCTACGCCACCATTCCCGTGTTCAAAATGGGTC AAATGTTTATGTATGACCTTTACATGTCGCACTTCAATATGGGAGACTTC GATCTATTTTCGCTGGACGACGTGGACACGGCTTTCGAAAAGATAACCCA GTTGAAATACAACCAAACAGTTTCACTGAAGGACAAAGGATATGGAATAT CCATTACGCCTTTGAACGCTGGACACATGATCGGCGGCACCATCTGGAAG ATCGTCAAGGTGGGCGAGGAGGATATTGTGTACGCCACCGACTTCAACCA TAAGAAGGAGCGCCACTTAAGTGGCTGCGAGCTGGACAGGCTGCAAAGAC CTTCGCTGCTCATTACCGACGCCTACAACGCACAGTACCAGCAGGCCAGA AGGAGGGCCCGCGATGAAAAGCTAATGACCAACATCCTGCAAACGGTGCG TAACAACGGCAATGTCCTGATAGCCGTGGATACGGCAGGACGAGTCCTGG AGTTGGCCCACATGCTGGACCAGCTGTGGAAGAACAAGGAATCTGGGCTA ATGGCCTACTCCCTGGCCCTTCTTAACAATGTGAGCTACAACGTGATTGA GTTCGCCAAGTCGCAGATAGAATGGATGAGTGACAAGCTCACGAAGGCTT TCGAAGGTGCCCGCAACAATCCCTTTCAGTTCAAGCACATCCAGCTGTGC CATTCACTGGCGGACGTCTATAAATTGCCCGCTGGTCCAAAAGTGGTGTT GGCCAGTACCCCAGATCTGGAGAGCGGATTCACGAGGGATCTCTTCGTGC AATGGGCCAGCAATGCCAACAATAGCATAATCCTTACTACTCGTACGTCT CCCGGCACTTTAGCCATGGAACTGGTGGAGAACTGCGCACCGGGCAAGCA AATCGAATTGGACGTCAGGCGAAGAGTTGACTTAGAAGGAGCTGAGTTGG AGGAGTACCTACGCACACAGGGCGAGAAACTTAATCCCCTTATCGTAAAG CCCGATGTGGAGGAAGAGAGCAGTTCCGAGTCCGAGGACGACATCGAGAT GAGCGTCATCACGGGCAAGCATGATATTGTGGTCAGACCGGAGGGTCGCC ATCACTCCGGTTTTTTCAAGTCCAACAAACGACACCACGTGATGTTCCCC TATCACGAGGAAAAGGTGAAGTGCGATGAGTATGGGGAGATCATCAATCT AGACGACTACCGGATTGCGGATGCGACAGGCTATGAGTTTGTACCTATGG AGGAGCAAAACAAGGAGAATGTTAAAAAGGAAGAACCGGGCATAGGAGCA GAACAACAGGCTAACGGAGGAATCGTCGACAATGATGTTCAGTTGCTGGA GAAGCCCACCAAGCTGATAAGCCAACGCAAAACAATCGAGGTGAATGCCC AAGTCCAGAGGATCGATTTCGAAGGTCGCTCTGATGGCGAGTCCATGCTA AAGATCCTCTCCCAGTTGAGGCCACGAAGGGTTATCGTCATACACGGCAC TGCCGAAGGCACACAAGTGGTGGCCAGGCACTGCGAACAGAATGTCGGTG CGCGCGTTTTTACTCCGCAGAAGGGGGAAATCATTGATGTCACCAGTGAG ATTCACATCTATCAGGTACGCCTGACGGAAGGACTTGTCTCCCAGCTGCA GTTCCAAAAGGGCAAGGACGCGGAGGTGGCGTGGGTGGATGGTCGCCTGG GCATGCGGGTGAAGGCCATCGAAGCACCCATGGACGTAACTGTGGAGCAG GACGCTTCCGTGCAAGAAGGCAAGACATTGACTCTTGAAACACTGGCGGA CGATGAGATTCCTATCCACAACTCAGTGCTCATTAACGAGCTGAAACTGT CCGACTTTAAGCAGACTCTCATGCGTAATAACATCAACTCGGAGTTCTCC GGCGGCGTGCTCTGGTGCAGCAACGGAACTCTGGCCTTGAGGCGAGTGGA TGCCGGCAAGGTAGCCATGGAGGGATGCTTATCCGAGGAGTACTACAAGA TCAGGGAGTTGCTGTACGAGCAGTATGCGATCGTTTAATATTCAAAATGA CGTTTGTGTAAGCCCCTAATGTTTTACTTGTTAAGATTAGAAAGTTTTTA TATAAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cpsf100-RA | 2558 | Cpsf100-RA | 142..2501 | 1..2360 | 11800 | 100 | Plus |
Cpsf100.a | 2257 | Cpsf100.a | 1..2257 | 98..2358 | 11220 | 99.8 | Plus |
Cpsf100-RB | 2205 | Cpsf100-RB | 12..2205 | 165..2358 | 10970 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 24857591..24857756 | 1..166 | 100 | -> | Plus |
chr3R | 24857816..24860007 | 167..2358 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1957-RA | 1..2271 | 18..2288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpsf100-RA | 1..2271 | 18..2288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpsf100-RA | 1..2271 | 18..2288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1957-RA | 1..2271 | 18..2288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpsf100-RA | 1..2271 | 18..2288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1957-RA | 44..2401 | 1..2358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpsf100-RA | 44..2401 | 1..2358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpsf100-RA | 74..2431 | 1..2358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1957-RA | 44..2401 | 1..2358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpsf100-RA | 74..2431 | 1..2358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29034871..29037062 | 167..2358 | 100 | Plus | |
3R | 29034646..29034811 | 1..166 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29034871..29037062 | 167..2358 | 100 | Plus | |
3R | 29034646..29034811 | 1..166 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29034871..29037062 | 167..2358 | 100 | Plus | |
3R | 29034646..29034811 | 1..166 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 24860368..24860533 | 1..166 | 100 | -> | Plus |
arm_3R | 24860593..24862784 | 167..2358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28775702..28777893 | 167..2358 | 100 | Plus | |
3R | 28775477..28775642 | 1..166 | 100 | -> | Plus |
Translation from 17 to 2287
> LD14168.pep MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFIKELKR QVHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYD LYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKDKGYGISITPLN AGHMIGGTIWKIVKVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLIT DAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTAGRVLELAHML DQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARN NPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNA NNSIILTTRTSPGTLAMELVENCAPGKQIELDVRRRVDLEGAELEEYLRT QGEKLNPLIVKPDVEEESSSESEDDIEMSVITGKHDIVVRPEGRHHSGFF KSNKRHHVMFPYHEEKVKCDEYGEIINLDDYRIADATGYEFVPMEEQNKE NVKKEEPGIGAEQQANGGIVDNDVQLLEKPTKLISQRKTIEVNAQVQRID FEGRSDGESMLKILSQLRPRRVIVIHGTAEGTQVVARHCEQNVGARVFTP QKGEIIDVTSEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRLGMRVKA IEAPMDVTVEQDASVQEGKTLTLETLADDEIPIHNSVLINELKLSDFKQT LMRNNINSEFSGGVLWCSNGTLALRRVDAGKVAMEGCLSEEYYKIRELLY EQYAIV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16269-PA | 756 | GF16269-PA | 1..756 | 1..756 | 3861 | 95.4 | Plus |
Dana\GF23370-PA | 597 | GF23370-PA | 4..383 | 5..392 | 369 | 26.5 | Plus |
Dana\GF18101-PA | 684 | GF18101-PA | 15..370 | 2..366 | 328 | 24.4 | Plus |
Dana\GF10658-PA | 655 | GF10658-PA | 1..428 | 5..362 | 210 | 22.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11633-PA | 756 | GG11633-PA | 1..756 | 1..756 | 4018 | 98.5 | Plus |
Dere\GG11690-PA | 597 | GG11690-PA | 4..383 | 5..392 | 374 | 26.5 | Plus |
Dere\GG16362-PA | 684 | GG16362-PA | 15..370 | 2..366 | 313 | 23.8 | Plus |
Dere\GG13497-PA | 654 | GG13497-PA | 1..428 | 5..362 | 218 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10247-PA | 754 | GH10247-PA | 1..754 | 1..756 | 3657 | 90.6 | Plus |
Dgri\GH14325-PA | 597 | GH14325-PA | 4..383 | 5..392 | 370 | 26.5 | Plus |
Dgri\GH19212-PA | 686 | GH19212-PA | 17..372 | 2..366 | 325 | 24.7 | Plus |
Dgri\GH14706-PA | 657 | GH14706-PA | 1..428 | 5..362 | 219 | 22.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cpsf100-PA | 756 | CG1957-PA | 1..756 | 1..756 | 3911 | 100 | Plus |
IntS11-PA | 597 | CG1972-PA | 4..383 | 5..392 | 359 | 26.5 | Plus |
Cpsf73-PA | 684 | CG7698-PA | 15..370 | 2..366 | 301 | 24.4 | Plus |
IntS9-PA | 654 | CG5222-PA | 1..428 | 5..362 | 202 | 22.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23051-PA | 754 | GI23051-PA | 1..754 | 1..756 | 3654 | 90.2 | Plus |
Dmoj\GI10422-PA | 597 | GI10422-PA | 4..383 | 5..392 | 371 | 26.5 | Plus |
Dmoj\GI24246-PA | 686 | GI24246-PA | 17..372 | 2..366 | 316 | 24.1 | Plus |
Dmoj\GI12252-PA | 659 | GI12252-PA | 1..428 | 5..362 | 214 | 22.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24248-PA | 583 | GL24248-PA | 1..583 | 175..756 | 2811 | 91.8 | Plus |
Dper\GL24247-PA | 154 | GL24247-PA | 1..148 | 1..148 | 797 | 98.6 | Plus |
Dper\GL23717-PA | 597 | GL23717-PA | 4..383 | 5..392 | 368 | 26.5 | Plus |
Dper\GL23169-PA | 684 | GL23169-PA | 15..370 | 2..366 | 322 | 24.4 | Plus |
Dper\GL25097-PA | 657 | GL25097-PA | 1..428 | 5..362 | 217 | 22.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26549-PA | 731 | GA26549-PA | 1..731 | 1..756 | 3603 | 90.6 | Plus |
Dpse\GA15164-PA | 597 | GA15164-PA | 4..383 | 5..392 | 376 | 26.8 | Plus |
Dpse\GA20526-PA | 684 | GA20526-PA | 15..370 | 2..366 | 322 | 24.4 | Plus |
Dpse\GA18747-PA | 657 | GA18747-PA | 1..428 | 5..362 | 217 | 22.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12754-PA | 743 | GM12754-PA | 1..743 | 1..756 | 3947 | 97.5 | Plus |
Dsec\GM12816-PA | 597 | GM12816-PA | 4..383 | 5..392 | 369 | 26.5 | Plus |
Dsec\GM18692-PA | 684 | GM18692-PA | 15..370 | 2..366 | 312 | 23.8 | Plus |
Dsec\GM24446-PA | 654 | GM24446-PA | 1..428 | 5..362 | 217 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21403-PA | 664 | GD21403-PA | 1..664 | 93..756 | 3530 | 98.8 | Plus |
Dsim\GD21460-PA | 597 | GD21460-PA | 4..383 | 5..392 | 369 | 26.5 | Plus |
Dsim\GD20157-PA | 684 | GD20157-PA | 15..370 | 2..366 | 312 | 23.8 | Plus |
Dsim\GD12515-PA | 654 | GD12515-PA | 1..428 | 5..362 | 217 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24636-PA | 693 | GJ24636-PA | 1..446 | 1..445 | 2230 | 94.4 | Plus |
Dvir\GJ24636-PA | 693 | GJ24636-PA | 439..693 | 501..756 | 1189 | 88.4 | Plus |
Dvir\GJ10637-PA | 597 | GJ10637-PA | 4..383 | 5..392 | 376 | 26.8 | Plus |
Dvir\GJ10819-PA | 686 | GJ10819-PA | 17..372 | 2..366 | 316 | 24.1 | Plus |
Dvir\GJ11484-PA | 658 | GJ11484-PA | 1..428 | 5..362 | 219 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22564-PA | 757 | GK22564-PA | 1..757 | 1..756 | 3661 | 90.8 | Plus |
Dwil\GK11920-PA | 597 | GK11920-PA | 4..383 | 5..392 | 371 | 26.5 | Plus |
Dwil\GK13096-PA | 684 | GK13096-PA | 15..370 | 2..366 | 325 | 24.2 | Plus |
Dwil\GK23916-PA | 659 | GK23916-PA | 1..428 | 5..362 | 213 | 22.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26465-PA | 756 | GE23822-PA | 1..756 | 1..756 | 4020 | 98.5 | Plus |
Dyak\GE26465-PB | 548 | GE26465-PB | 1..544 | 1..544 | 2909 | 98.5 | Plus |
Dyak\GE23879-PA | 597 | GE23879-PA | 4..383 | 5..392 | 371 | 26.5 | Plus |
Dyak\GE25184-PA | 684 | GE25184-PA | 15..370 | 2..366 | 311 | 23.8 | Plus |
Dyak\GE19796-PA | 654 | GE19796-PA | 1..428 | 5..362 | 218 | 23 | Plus |
Translation from 17 to 2287
> LD14168.hyp MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFIKELKR QVHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYD LYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKDKGYGISITPLN AGHMIGGTIWKIVKVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLIT DAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTAGRVLELAHML DQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARN NPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNA NNSIILTTRTSPGTLAMELVENCAPGKQIELDVRRRVDLEGAELEEYLRT QGEKLNPLIVKPDVEEESSSESEDDIEMSVITGKHDIVVRPEGRHHSGFF KSNKRHHVMFPYHEEKVKCDEYGEIINLDDYRIADATGYEFVPMEEQNKE NVKKEEPGIGAEQQANGGIVDNDVQLLEKPTKLISQRKTIEVNAQVQRID FEGRSDGESMLKILSQLRPRRVIVIHGTAEGTQVVARHCEQNVGARVFTP QKGEIIDVTSEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRLGMRVKA IEAPMDVTVEQDASVQEGKTLTLETLADDEIPIHNSVLINELKLSDFKQT LMRNNINSEFSGGVLWCSNGTLALRRVDAGKVAMEGCLSEEYYKIRELLY EQYAIV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cpsf100-PA | 756 | CG1957-PA | 1..756 | 1..756 | 3911 | 100 | Plus |
IntS11-PA | 597 | CG1972-PA | 4..383 | 5..392 | 359 | 26.5 | Plus |
Cpsf73-PA | 684 | CG7698-PA | 15..370 | 2..366 | 301 | 24.4 | Plus |
IntS9-PA | 654 | CG5222-PA | 1..428 | 5..362 | 202 | 22.5 | Plus |