BDGP Sequence Production Resources |
Search the DGRC for LD14189
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 141 |
Well: | 89 |
Vector: | pBS SK- |
Associated Gene/Transcript | rdgBbeta-RA |
Protein status: | LD14189.pep: gold |
Preliminary Size: | 1367 |
Sequenced Size: | 1367 |
Gene | Date | Evidence |
---|---|---|
CG17818 | 2001-01-01 | Release 2 assignment |
CG17818 | 2002-12-11 | Blastp of sequenced clone |
CG17818 | 2003-01-01 | Sim4 clustering to Release 3 |
rdgBbeta | 2008-04-29 | Release 5.5 accounting |
rdgBbeta | 2008-08-15 | Release 5.9 accounting |
rdgBbeta | 2008-12-18 | 5.12 accounting |
1367 bp (1367 high quality bases) assembled on 2002-12-11
GenBank Submission: AF160934
> LD14189.complete CGCGTGTGTGTCTCTTTGCGTAACGTTCAAAGTTTTGATTTGTATTTTCT CCGGCATACAAATCCGCCAAAGAAATGGTGCTAATCAAGGAGTATCGCGT ATGCATGCCGCTTACGGTGGAGGAGTACAAGATCGGACAGCTTTATATGA TAGCGCGCCACAGTCTGGAGCAATCGGAGGAGGGCGAGGGCGTTGAGGTG GTGGAGAACAAGCCCTGCGAGGATCCCGTTCACGGCAAGGGCCAGTACAC GGAGAAGCACATTCACTTGTCCAGCCGACTGCCCTACTGGATCCAGGCCA TTTGCCCCCGAGTCTTCTATGTGATAGAGAAATCATGGAACTACTATCCG TACACGCTAACAGAATACACGTGTTCCTTTATACCCAAACTAAATGTGCT CATCAAAACTAAGTACGAGGACAATAATGGCAGCACAGAAAACTGTCTGG ATCTTACTGAAGATGAGCTCAAAGTTCGAACTGTGGATCATTTGGACATA GCGTTCGATGAGGTCAGTGCCAAGCATTATAAGAAGGAAGAAGATCCCAA GTTCTTCAAATCCGAAAAGACAAACCGTGGTCCATTGATTGAAGGATGGC GGGAAACGGACAAGCCCATTATGTGCTCCTACAAGGTGGTCCACGCCAGC TTTGAGGTATGGGGTCTGCAGACCAAAGTGGAGGACTTCATTCAGCGCGG AATTCGGGAGATTCTACTACTGGGACACCGGCAGGCTTTCGCATGGGTGG ACGAATGGCATGGCATGACCCTGGAGGATGTTCGCGCCTACGAGCGTCAA AAGCAGGCCGAGACCAATGAGAAGATTCACAACACAAGTGGTGGCGCAAA TGCAGCGGCCAACGCCAAAGAGGCAAATGATGGCGATATTGATTGAGAAT TTACCTAAAATGTAGGAAAATCGAAGTAACAAAATGCAGGCTAAAATAGT ACCTTCAAGGCCTCGCGGCAAGCTTAAAAAGTTTCATAGGAAATATCTTA TTAACGTACGCATATTTATGTATATACATACATATATATATATCATTGTC TATGCATTTCTATGGTCCAAAGAAGCTCAGAGCTCTAGTAACTGCCTGCA GCGTTTAAAAGTACAATGCACAAGCACCTAGCTGGAAACTCGAAACCAAA TAATTGTTACAAACTAGATCACGCAATTTTTTAGTCAAACTTATAAGCGT TACACAGACATCCTAGTGAACGGTTTGCGTTAACTATATTCCCTAGTTTA GCTCACATCTAAATGTATATTTTGGTGTACAAATACAAACAATTTTGGTG TACAAATACAAACGATTAAACATATTAGAAATATACCTATGTCATATGAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 13582890..13583664 | 1348..574 | 3860 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 13585099..13585249 | 274..124 | 755 | 100 | Minus |
chr2R | 21145070 | chr2R | 13583726..13583855 | 573..444 | 650 | 100 | Minus |
chr2R | 21145070 | chr2R | 13585318..13585442 | 125..1 | 625 | 100 | Minus |
chr2R | 21145070 | chr2R | 13584946..13585037 | 363..272 | 460 | 100 | Minus |
chr2R | 21145070 | chr2R | 13583915..13583987 | 443..371 | 365 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17695775..17696550 | 1349..574 | 3880 | 100 | Minus |
2R | 25286936 | 2R | 17697985..17698135 | 274..124 | 755 | 100 | Minus |
2R | 25286936 | 2R | 17696612..17696741 | 573..444 | 650 | 100 | Minus |
2R | 25286936 | 2R | 17698204..17698328 | 125..1 | 625 | 100 | Minus |
2R | 25286936 | 2R | 17697832..17697923 | 363..272 | 460 | 100 | Minus |
2R | 25286936 | 2R | 17696801..17696873 | 443..371 | 365 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17696974..17697749 | 1349..574 | 3880 | 100 | Minus |
2R | 25260384 | 2R | 17699184..17699334 | 274..124 | 755 | 100 | Minus |
2R | 25260384 | 2R | 17697811..17697940 | 573..444 | 650 | 100 | Minus |
2R | 25260384 | 2R | 17699403..17699527 | 125..1 | 625 | 100 | Minus |
2R | 25260384 | 2R | 17699031..17699122 | 363..272 | 460 | 100 | Minus |
2R | 25260384 | 2R | 17698000..17698072 | 443..371 | 365 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13582890..13583664 | 574..1348 | 95 | <- | Minus |
chr2R | 13583726..13583855 | 444..573 | 100 | <- | Minus |
chr2R | 13583915..13583986 | 372..443 | 100 | <- | Minus |
chr2R | 13584939..13585034 | 275..371 | 93 | <- | Minus |
chr2R | 13585099..13585247 | 126..274 | 100 | <- | Minus |
chr2R | 13585318..13585442 | 1..125 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rdgBbeta-RA | 1..822 | 75..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rdgBbeta-RA | 1..822 | 75..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rdgBbeta-RA | 1..822 | 75..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rdgBbeta-RA | 1..822 | 75..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rdgBbeta-RA | 1..822 | 75..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rdgBbeta-RA | 34..1381 | 1..1348 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rdgBbeta-RA | 34..1381 | 1..1348 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rdgBbeta-RA | 35..1382 | 1..1348 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rdgBbeta-RA | 34..1381 | 1..1348 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rdgBbeta-RA | 35..1382 | 1..1348 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17695776..17696550 | 574..1348 | 100 | <- | Minus |
2R | 17696612..17696741 | 444..573 | 100 | <- | Minus |
2R | 17696801..17696872 | 372..443 | 100 | <- | Minus |
2R | 17697825..17697920 | 275..371 | 93 | <- | Minus |
2R | 17697985..17698133 | 126..274 | 100 | <- | Minus |
2R | 17698204..17698328 | 1..125 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17695776..17696550 | 574..1348 | 100 | <- | Minus |
2R | 17696612..17696741 | 444..573 | 100 | <- | Minus |
2R | 17696801..17696872 | 372..443 | 100 | <- | Minus |
2R | 17697825..17697920 | 275..371 | 93 | <- | Minus |
2R | 17697985..17698133 | 126..274 | 100 | <- | Minus |
2R | 17698204..17698328 | 1..125 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17695776..17696550 | 574..1348 | 100 | <- | Minus |
2R | 17696612..17696741 | 444..573 | 100 | <- | Minus |
2R | 17696801..17696872 | 372..443 | 100 | <- | Minus |
2R | 17697825..17697920 | 275..371 | 93 | <- | Minus |
2R | 17697985..17698133 | 126..274 | 100 | <- | Minus |
2R | 17698204..17698328 | 1..125 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13585490..13585638 | 126..274 | 100 | <- | Minus |
arm_2R | 13585709..13585833 | 1..125 | 100 | Minus | |
arm_2R | 13583281..13584055 | 574..1348 | 100 | <- | Minus |
arm_2R | 13584117..13584246 | 444..573 | 100 | <- | Minus |
arm_2R | 13584306..13584377 | 372..443 | 100 | <- | Minus |
arm_2R | 13585330..13585425 | 275..371 | 93 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17697811..17697940 | 444..573 | 100 | <- | Minus |
2R | 17698000..17698071 | 372..443 | 100 | <- | Minus |
2R | 17699024..17699119 | 275..371 | 93 | <- | Minus |
2R | 17699184..17699332 | 126..274 | 100 | <- | Minus |
2R | 17699403..17699527 | 1..125 | 100 | Minus | |
2R | 17696975..17697749 | 574..1348 | 100 | <- | Minus |
Translation from 74 to 392
> LD14189.hyp MVLIKEYRVCMPLTVEEYKIGQLYMIARHSLEQSEEGEGVEVVENKPCED PVHGKGQYTEKHIHLSSRLPYWIQAICPRVFYVIEKSWNYYPYTLTGEDV PLYPN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rdgBbeta-PA | 273 | CG17818-PA | 1..96 | 1..96 | 525 | 100 | Plus |
rdgB-PG | 1237 | CG11111-PG | 1..102 | 2..101 | 264 | 52 | Plus |
rdgB-PE | 1241 | CG11111-PE | 1..102 | 2..101 | 264 | 52 | Plus |
rdgB-PF | 1250 | CG11111-PF | 1..102 | 2..101 | 264 | 52 | Plus |
rdgB-PB | 1250 | CG11111-PB | 1..102 | 2..101 | 264 | 52 | Plus |
Translation from 74 to 895
> LD14189.pep MVLIKEYRVCMPLTVEEYKIGQLYMIARHSLEQSEEGEGVEVVENKPCED PVHGKGQYTEKHIHLSSRLPYWIQAICPRVFYVIEKSWNYYPYTLTEYTC SFIPKLNVLIKTKYEDNNGSTENCLDLTEDELKVRTVDHLDIAFDEVSAK HYKKEEDPKFFKSEKTNRGPLIEGWRETDKPIMCSYKVVHASFEVWGLQT KVEDFIQRGIREILLLGHRQAFAWVDEWHGMTLEDVRAYERQKQAETNEK IHNTSGGANAAANAKEANDGDID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13233-PA | 276 | GF13233-PA | 1..274 | 1..273 | 1304 | 92 | Plus |
Dana\GF22606-PA | 1254 | GF22606-PA | 1..267 | 2..251 | 620 | 46.4 | Plus |
Dana\GF18473-PA | 272 | GF18473-PA | 3..257 | 4..249 | 499 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21028-PA | 263 | GG21028-PA | 1..262 | 1..272 | 1309 | 90.1 | Plus |
Dere\GG17812-PA | 1258 | GG17812-PA | 1..267 | 2..251 | 608 | 45.7 | Plus |
Dere\GG16119-PA | 272 | GG16119-PA | 3..257 | 4..249 | 520 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20541-PA | 274 | GH20541-PA | 1..264 | 1..264 | 1296 | 89 | Plus |
Dgri\GH17761-PA | 1306 | GH17761-PA | 1..267 | 2..251 | 614 | 45.7 | Plus |
Dgri\GH14846-PA | 272 | GH14846-PA | 3..257 | 4..249 | 503 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rdgBbeta-PA | 273 | CG17818-PA | 1..273 | 1..273 | 1471 | 100 | Plus |
rdgB-PG | 1237 | CG11111-PG | 1..267 | 2..251 | 607 | 45.7 | Plus |
rdgB-PE | 1241 | CG11111-PE | 1..267 | 2..251 | 607 | 45.7 | Plus |
rdgB-PF | 1250 | CG11111-PF | 1..267 | 2..251 | 607 | 45.7 | Plus |
rdgB-PB | 1250 | CG11111-PB | 1..267 | 2..251 | 607 | 45.7 | Plus |
rdgB-PA | 1259 | CG11111-PA | 1..267 | 2..251 | 607 | 45.7 | Plus |
rdgB-PD | 1259 | CG11111-PD | 1..267 | 2..251 | 607 | 45.7 | Plus |
rdgB-PC | 1259 | CG11111-PC | 1..267 | 2..251 | 607 | 45.7 | Plus |
rdgB-PH | 1263 | CG11111-PH | 1..267 | 2..251 | 607 | 45.7 | Plus |
rdgB-PI | 1277 | CG11111-PI | 1..267 | 2..251 | 607 | 45.7 | Plus |
rdgB-PK | 1284 | CG11111-PK | 1..267 | 2..251 | 607 | 45.7 | Plus |
rdgB-PJ | 1297 | CG11111-PJ | 1..267 | 2..251 | 607 | 45.7 | Plus |
vib-PC | 272 | CG5269-PC | 3..257 | 4..249 | 521 | 43.5 | Plus |
vib-PA | 272 | CG5269-PA | 3..257 | 4..249 | 521 | 43.5 | Plus |
vib-PB | 273 | CG5269-PB | 3..258 | 4..249 | 507 | 43 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18810-PA | 273 | GI18810-PA | 1..252 | 1..252 | 1278 | 91.7 | Plus |
Dmoj\GI15095-PA | 1249 | GI15095-PA | 1..267 | 2..251 | 625 | 46.4 | Plus |
Dmoj\GI23689-PA | 272 | GI23689-PA | 3..257 | 4..249 | 498 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17678-PA | 276 | GL17678-PA | 1..276 | 1..273 | 1228 | 84.8 | Plus |
Dper\GL19870-PA | 1281 | GL19870-PA | 1..267 | 2..251 | 616 | 46.1 | Plus |
Dper\GL11977-PA | 272 | GL11977-PA | 3..257 | 4..249 | 502 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14679-PA | 276 | GA14679-PA | 1..276 | 1..273 | 1226 | 85.1 | Plus |
Dpse\GA10766-PA | 1260 | GA10766-PA | 1..267 | 2..251 | 614 | 46.1 | Plus |
Dpse\GA18775-PA | 272 | GA18775-PA | 3..257 | 4..249 | 502 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19958-PA | 275 | GM19958-PA | 1..275 | 1..273 | 1427 | 97.1 | Plus |
Dsec\GM17640-PA | 1236 | GM17640-PA | 1..267 | 2..251 | 612 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25449-PA | 266 | GD25449-PA | 1..266 | 1..273 | 1366 | 94.2 | Plus |
Dsim\GD20127-PA | 272 | GD20127-PA | 3..257 | 4..249 | 520 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21837-PA | 279 | GJ21837-PA | 1..268 | 1..268 | 1285 | 88.1 | Plus |
Dvir\GJ18902-PA | 1247 | GJ18902-PA | 1..267 | 2..251 | 617 | 46.1 | Plus |
Dvir\GJ23248-PA | 272 | GJ23248-PA | 3..257 | 4..249 | 498 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21738-PA | 269 | GK21738-PA | 1..253 | 1..253 | 1217 | 86.2 | Plus |
Dwil\GK16248-PA | 1296 | GK16248-PA | 1..281 | 2..265 | 626 | 44.5 | Plus |
Dwil\GK13484-PA | 272 | GK13484-PA | 3..257 | 4..249 | 511 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13971-PA | 268 | GE13971-PA | 1..268 | 1..273 | 1408 | 96.3 | Plus |
Dyak\GE17108-PA | 1258 | GE17108-PA | 1..267 | 2..251 | 606 | 46.1 | Plus |
Dyak\GE25145-PA | 272 | GE25145-PA | 3..257 | 4..249 | 521 | 43.5 | Plus |