BDGP Sequence Production Resources |
Search the DGRC for LD14381
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 143 |
Well: | 81 |
Vector: | pBS SK- |
Associated Gene/Transcript | DIP1-RC |
Protein status: | LD14381.pep: gold |
Sequenced Size: | 2205 |
Gene | Date | Evidence |
---|---|---|
DIP1-RC | 2010-11-11 | Gleaning Pick By Joe Carlson |
2205 bp assembled on 2011-01-03
GenBank Submission: BT125869.1
> LD14381.complete AGCAGTGAAAAATTAAATTACAAAAGCGAAAAAGCGAATTACAAAAGTGA AAAATTAAATTACAAAAAAAATCAAGATGAAGCGAAATCGTCGTGCATTT GCTGGAAACAACAAGCCATTTGTCTTTGGAGGCATTTACGCCGCCAATGT CCAGGAGCAGCAGTCTTCTCCGGTGGCTTTATATCCGACATCGGCCTCCC CGGTGGCTGTTCAATCGCCACAGGACGCATTTTTGGCTGTTCAGTCGCCA GGGGCTCCTGCCCCCGTTCAACTGGCCAACTCGTCCGACCAGCAGAATAA TCCGGATGCGGACGCCATTGCCTCCAAACTGCCCATGCCAGTTATCATCA AGGAGGAGCCGATCTCTGTCAACGATGAACCGTCCGTCGACAATATAGAG GACAATACCAGTGCCAGTACCAGTGCCAGCGGCATCGGGGGCAAGATCCC ATTTAAAAAAATCTTCCAAAAGCGCAAGAAGTCGTCTGAACGCACTCGGG ACAAGAAGTTGCGACAGAACCGCCAGCTGCGCAAGTCCATGCTCCCCAAG AACGCTCTGATGGCCCTCAACGAGGTGAAGGGCGTGACCATCAGCGATTT CACCATCGACAGCAATACCGACGGGGGATTCACGGCCGTTGTCACTGTCA ACTCGAATCAGTACGAGGGCAAGGGTACCTCGAAAATGACAGCCAAGAAC GCGGCCTGCGAGAAGGCTTGGCGCGATTTTATTATTGCAAAAATGACCCC CAAGCCGCCCCGTATTCACCAGGTGGAGATGGGTTCGGAGCCAATGGATA TCAACGAGGATGAGGCCGATGCACCGGATGATGATCTGCCCATGTTGAAT CTGGCCTCGTTTGCCATCTACAAGCTGTTCGCGGAGTGGGAACGGGAGGG CTATGTCGTGCCCGAGATGCACCCTTCGGCCAATGCTGCCCAACAGGCGG GAGGGGATGCCGGAACTCCAGTTCCCCCCGTGCCGAAGGAGCCAAAGAAG CCGCCAGTGCGCACCGAGCTACCCTCTGGCTGGGAGACCATGCACCCGGC GACCATTCTTTGCATTATGCGTCCGGGACTCAACTACGTGGACTACGGGT CATCTGGCGACAAGACCAACGGCATGCAGCATCTGGGAATCATGGTGGAC AACCAGGAGTTCCACGCCAACGGCAGATCAAAGAAAATCGCCCGTCGCAA CGTGGCCGTGAAAGTGTGCAACTCTCTGTTCGGCACCAACTTCACCTACA GCGACACCACTTAAGACACCAACTCCAACCGCAGACTCCAACTGCCGACG ACAACACACATAACGGACACTCTTAACGGACAGCAATCAGAAGATTGCGA CCCTGACGTCAATTGCGCAACTTTAAGCGACACCACTTAAGACACCAACT CCAACCGCAGACTCCAACTGCAGACGACAACACACCTATGCCTCTCTTAA CGGACAGCAATCAGAAGATTGCGACCCTGACGTCAATGGCGCAACTTTAA GCGACACCACTTAAGACACCAACTCCAACCGCAGACTCCAACTGCAGACG ACAACACACCTATGCCTCTCTTAACGGACAGCAATCGGAAGATTGCGACC CTGACGTCAATTGCGCAACTTTAAGCGACACCACTTAAGACACCAACTCC AACCGCAGACTCCAACTGCCGACGACAACACACCTATGCCTCTCTTAACG GACAGCAATCAGAAGATTGCGACCCTGACGTCAATGGCGCAACTTTAAGC GACACCACTTAAGACACCAACTCCAACCGCAGACTCCAACTGCCGACGAC AACACACCTATGCCTCTCTTAACGGACAGCAATCGGAAGATTGCGACCCT GACGTCAATGGCGCAACTTTAAGCGACACCACTTAAGACACCAACTCCAA CCGCAGACTCCAACTGCCGACGACAACACACCTATGCCTCTCTTAACGGA CAGCAATCGGAAGATTGCGACCCTGACGTCAATGGCGCAACTTTAAGCGA CACCACTTAAGACACCAACTCCAACCGCAGACTCCAACTGCCGACGACAA CACACCTATGCCTCTCTTAACGGACAGCAATCAGAAGATTGCGACCCTGA CGTCAATGGCGCAACTTTAAGAATTCCTTTTCTGTCAAAGTGAAGAGGCA TATTAAACAAGAATTTCCCAATTTAGTTTGTATTTAAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 21490292..21491410 | 2185..1067 | 5595 | 100 | Minus |
chrX | 22417052 | chrX | 21490356..21491101 | 1997..1250 | 3480 | 98 | Minus |
chrX | 22417052 | chrX | 21490480..21491227 | 2121..1376 | 3480 | 98 | Minus |
chrX | 22417052 | chrX | 21491471..21492049 | 1066..488 | 2895 | 100 | Minus |
chrX | 22417052 | chrX | 21490356..21490977 | 1873..1250 | 2890 | 97.9 | Minus |
chrX | 22417052 | chrX | 21490604..21491227 | 2121..1500 | 2890 | 97.9 | Minus |
chrX | 22417052 | chrX | 21490356..21490853 | 1749..1250 | 2300 | 97.8 | Minus |
chrX | 22417052 | chrX | 21490728..21491227 | 2121..1624 | 2300 | 97.8 | Minus |
chrX | 22417052 | chrX | 21493519..21493867 | 488..140 | 1745 | 100 | Minus |
chrX | 22417052 | chrX | 21490356..21490729 | 1625..1250 | 1650 | 96.5 | Minus |
chrX | 22417052 | chrX | 21490852..21491227 | 2121..1748 | 1650 | 96.5 | Minus |
chrX | 22417052 | chrX | 21490356..21490605 | 1501..1250 | 1090 | 96.4 | Minus |
chrX | 22417052 | chrX | 21490976..21491227 | 2121..1872 | 1090 | 96.4 | Minus |
chrX | 22417052 | chrX | 21495131..21495270 | 140..1 | 700 | 100 | Minus |
chrX | 22417052 | chrX | 21490356..21490481 | 1377..1250 | 500 | 94.5 | Minus |
chrX | 22417052 | chrX | 21491100..21491227 | 2121..1996 | 500 | 94.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 21625134..21626252 | 2185..1067 | 5595 | 100 | Minus |
X | 23542271 | X | 21625198..21625943 | 1997..1250 | 3480 | 98 | Minus |
X | 23542271 | X | 21625322..21626069 | 2121..1376 | 3480 | 98 | Minus |
X | 23542271 | X | 21626313..21626891 | 1066..488 | 2895 | 100 | Minus |
X | 23542271 | X | 21625198..21625819 | 1873..1250 | 2890 | 97.9 | Minus |
X | 23542271 | X | 21625446..21626069 | 2121..1500 | 2890 | 97.9 | Minus |
X | 23542271 | X | 21625198..21625695 | 1749..1250 | 2300 | 97.8 | Minus |
X | 23542271 | X | 21625570..21626069 | 2121..1624 | 2300 | 97.8 | Minus |
X | 23542271 | X | 21628361..21628709 | 488..140 | 1745 | 100 | Minus |
X | 23542271 | X | 21625694..21626069 | 2121..1748 | 1650 | 96.5 | Minus |
X | 23542271 | X | 21625198..21625571 | 1625..1250 | 1650 | 96.5 | Minus |
X | 23542271 | X | 21625198..21625447 | 1501..1250 | 1090 | 96.4 | Minus |
X | 23542271 | X | 21625818..21626069 | 2121..1872 | 1090 | 96.4 | Minus |
X | 23542271 | X | 21629973..21630112 | 140..1 | 700 | 100 | Minus |
X | 23542271 | X | 21625198..21625323 | 1377..1250 | 500 | 94.5 | Minus |
X | 23542271 | X | 21625942..21626069 | 2121..1996 | 500 | 94.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 21610226..21611344 | 2185..1067 | 5595 | 100 | Minus |
X | 23527363 | X | 21611405..21611983 | 1066..488 | 2895 | 100 | Minus |
X | 23527363 | X | 21613453..21613801 | 488..140 | 1745 | 100 | Minus |
X | 23527363 | X | 21615065..21615204 | 140..1 | 700 | 100 | Minus |
X | 23527363 | X | 21603057..21603098 | 1175..1134 | 165 | 92.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 21490292..21491410 | 1067..2185 | 100 | <- | Minus |
chrX | 21491471..21492048 | 489..1066 | 100 | <- | Minus |
chrX | 21493519..21493867 | 140..488 | 100 | <- | Minus |
chrX | 21495132..21495270 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
DIP1-RC | 1..1188 | 77..1264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
DIP1-RC | 1..1188 | 77..1264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
DIP1-RC | 1..1188 | 77..1264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
DIP1-RC | 47..2231 | 1..2185 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
DIP1-RC | 47..2231 | 1..2185 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
DIP1-RC | 37..2221 | 1..2185 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21625134..21626252 | 1067..2185 | 100 | <- | Minus |
X | 21626313..21626890 | 489..1066 | 100 | <- | Minus |
X | 21628361..21628709 | 140..488 | 100 | <- | Minus |
X | 21629974..21630112 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21625134..21626252 | 1067..2185 | 100 | <- | Minus |
X | 21626313..21626890 | 489..1066 | 100 | <- | Minus |
X | 21628361..21628709 | 140..488 | 100 | <- | Minus |
X | 21629974..21630112 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21625134..21626252 | 1067..2185 | 100 | <- | Minus |
X | 21626313..21626890 | 489..1066 | 100 | <- | Minus |
X | 21628361..21628709 | 140..488 | 100 | <- | Minus |
X | 21629974..21630112 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 21496161..21497279 | 1067..2185 | 100 | <- | Minus |
arm_X | 21497340..21497917 | 489..1066 | 100 | <- | Minus |
arm_X | 21499388..21499736 | 140..488 | 100 | <- | Minus |
arm_X | 21501001..21501139 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21610226..21611344 | 1067..2185 | 100 | <- | Minus |
X | 21611405..21611982 | 489..1066 | 100 | <- | Minus |
X | 21613453..21613801 | 140..488 | 100 | <- | Minus |
X | 21615066..21615204 | 1..139 | 100 | Minus |
Translation from 76 to 1263
> LD14381.hyp MKRNRRAFAGNNKPFVFGGIYAANVQEQQSSPVALYPTSASPVAVQSPQD AFLAVQSPGAPAPVQLANSSDQQNNPDADAIASKLPMPVIIKEEPISVND EPSVDNIEDNTSASTSASGIGGKIPFKKIFQKRKKSSERTRDKKLRQNRQ LRKSMLPKNALMALNEVKGVTISDFTIDSNTDGGFTAVVTVNSNQYEGKG TSKMTAKNAACEKAWRDFIIAKMTPKPPRIHQVEMGSEPMDINEDEADAP DDDLPMLNLASFAIYKLFAEWEREGYVVPEMHPSANAAQQAGGDAGTPVP PVPKEPKKPPVRTELPSGWETMHPATILCIMRPGLNYVDYGSSGDKTNGM QHLGIMVDNQEFHANGRSKKIARRNVAVKVCNSLFGTNFTYSDTT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
DIP1-PC | 395 | CG17686-PC | 1..395 | 1..395 | 2057 | 100 | Plus |
DIP1-PD | 410 | CG17686-PD | 1..410 | 1..395 | 2031 | 96.3 | Plus |
DIP1-PB | 409 | CG17686-PB | 27..409 | 13..395 | 1951 | 98.2 | Plus |
DIP1-PI | 378 | CG17686-PI | 3..378 | 20..395 | 1944 | 99.5 | Plus |
DIP1-PG | 378 | CG17686-PG | 3..378 | 20..395 | 1944 | 99.5 | Plus |
Translation from 76 to 1263
> LD14381.pep MKRNRRAFAGNNKPFVFGGIYAANVQEQQSSPVALYPTSASPVAVQSPQD AFLAVQSPGAPAPVQLANSSDQQNNPDADAIASKLPMPVIIKEEPISVND EPSVDNIEDNTSASTSASGIGGKIPFKKIFQKRKKSSERTRDKKLRQNRQ LRKSMLPKNALMALNEVKGVTISDFTIDSNTDGGFTAVVTVNSNQYEGKG TSKMTAKNAACEKAWRDFIIAKMTPKPPRIHQVEMGSEPMDINEDEADAP DDDLPMLNLASFAIYKLFAEWEREGYVVPEMHPSANAAQQAGGDAGTPVP PVPKEPKKPPVRTELPSGWETMHPATILCIMRPGLNYVDYGSSGDKTNGM QHLGIMVDNQEFHANGRSKKIARRNVAVKVCNSLFGTNFTYSDTT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10760-PA | 296 | GF10760-PA | 63..295 | 131..390 | 315 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17525-PA | 395 | GG17525-PA | 1..395 | 1..395 | 1530 | 76.7 | Plus |
Dere\GG14132-PA | 310 | GG14132-PA | 24..308 | 62..389 | 356 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17808-PA | 279 | GH17808-PA | 6..277 | 121..391 | 1036 | 71.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
DIP1-PC | 395 | CG17686-PC | 1..395 | 1..395 | 2057 | 100 | Plus |
DIP1-PD | 410 | CG17686-PD | 1..410 | 1..395 | 2031 | 96.3 | Plus |
DIP1-PB | 409 | CG17686-PB | 27..409 | 13..395 | 1951 | 98.2 | Plus |
DIP1-PI | 378 | CG17686-PI | 3..378 | 20..395 | 1944 | 99.5 | Plus |
DIP1-PG | 378 | CG17686-PG | 3..378 | 20..395 | 1944 | 99.5 | Plus |
DIP1-PF | 394 | CG17686-PF | 19..394 | 20..395 | 1944 | 99.5 | Plus |
DIP1-PE | 378 | CG17686-PE | 3..378 | 20..395 | 1944 | 99.5 | Plus |
DIP1-PH | 309 | CG17686-PH | 1..309 | 87..395 | 1621 | 100 | Plus |
CG12493-PB | 293 | CG12493-PB | 11..290 | 66..389 | 373 | 32.4 | Plus |
CG12493-PA | 296 | CG12493-PA | 11..293 | 66..389 | 362 | 32.1 | Plus |
blanks-PA | 324 | CG10630-PA | 55..321 | 93..389 | 353 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14602-PA | 338 | GI14602-PA | 7..337 | 76..393 | 1107 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13431-PA | 392 | GL13431-PA | 1..391 | 1..393 | 1163 | 60.4 | Plus |
Dper\GL27226-PA | 244 | GL27226-PA | 1..241 | 155..390 | 611 | 52.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14612-PA | 392 | GA14612-PA | 1..391 | 1..393 | 1165 | 60.7 | Plus |
Dpse\GA26778-PA | 311 | GA26778-PA | 23..308 | 129..390 | 575 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13527-PA | 400 | GM13527-PA | 1..399 | 1..394 | 1719 | 83.6 | Plus |
Dsec\GM24510-PA | 381 | GM24510-PA | 1..380 | 1..394 | 1712 | 86 | Plus |
Dsec\GM19637-PA | 364 | GM19637-PA | 3..363 | 20..394 | 1686 | 85.9 | Plus |
Dsec\GM13531-PA | 392 | GM13531-PA | 1..391 | 1..394 | 1685 | 82.6 | Plus |
Dsec\GM19640-PA | 396 | GM19640-PA | 1..395 | 1..394 | 1673 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24670-PA | 400 | GD24670-PA | 1..399 | 1..394 | 1760 | 85.6 | Plus |
Dsim\GD15489-PA | 380 | GD15489-PA | 1..379 | 1..394 | 1460 | 74.1 | Plus |
Dsim\GD24430-PA | 110 | GD24430-PA | 7..110 | 292..395 | 491 | 85.6 | Plus |
Dsim\GD13198-PA | 257 | GD13198-PA | 29..254 | 139..389 | 356 | 35.1 | Plus |
Dsim\GD13235-PA | 304 | GD13235-PA | 21..301 | 68..389 | 343 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19010-PA | 375 | GJ19010-PA | 1..374 | 1..393 | 1014 | 57.2 | Plus |
Dvir\GJ10989-PA | 199 | GJ10989-PA | 1..199 | 155..391 | 419 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25242-PA | 412 | GK25242-PA | 1..407 | 1..389 | 1089 | 57.2 | Plus |