BDGP Sequence Production Resources |
Search the DGRC for LD14392
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 143 |
Well: | 92 |
Vector: | pBS SK- |
Associated Gene/Transcript | CSN5-RA |
Protein status: | LD14392.pep: gold |
Preliminary Size: | 1189 |
Sequenced Size: | 1201 |
Gene | Date | Evidence |
---|---|---|
CG14884 | 2001-01-01 | Release 2 assignment |
CG14884 | 2002-12-11 | Blastp of sequenced clone |
CG14884 | 2003-01-01 | Sim4 clustering to Release 3 |
CSN5 | 2008-04-29 | Release 5.5 accounting |
CSN5 | 2008-08-15 | Release 5.9 accounting |
CSN5 | 2008-12-18 | 5.12 accounting |
1201 bp (1201 high quality bases) assembled on 2002-12-11
GenBank Submission: AF132563
> LD14392.complete CGGAAAACAAAAACTTGCAACAAAAGACTACAATTTTCGGCATAAGTACA ATCACAATGGACTCCGACGCCGCACAAAAGACCTGGGAGCTGGAGAACAA CATCCAGACGTTGCCCAGTTGTGACGAGATCTTTCGCTACGACGCCGAAC AGCAGCGGCAGATCATCGATGCGAAGCCCTGGGAGAAAGATCCCCACTTC TTTAAGGACATTAAGATCTCGGCTCTGGCGCTCCTAAAGATGGTGATGCA CGCTCGCTCTGGCGGTACTTTGGAGGTGATGGGTCTAATGCTTGGCAAGG TAGAGGACAACACAATGATTGTCATGGATGCATTTGCACTGCCAGTGGAG GGCACTGAAACCCGCGTCAATGCCCAGGCACAAGCGTACGAGTACATGAC CGCCTACATGGAAGCGGCCAAAGAGGTGGGACGCATGGAACACGCCGTGG GCTGGTATCACAGCCATCCCGGTTACGGTTGCTGGTTGTCCGGCATCGAT GTGTCCACCCAGATGCTCAACCAGACATACCAGGAGCCATTCGTGGCCAT TGTGGTTGATCCGGTGCGCACTGTTTCCGCTGGCAAGGTGTGTCTGGGTG CATTCCGCACGTATCCAAAAGGTTATAAGCCACCAAACGAGGAGCCCTCG GAGTATCAGACCATCCCGCTGAATAAGATCGAAGACTTTGGAGTCCACTG CAAGCAGTACTATCCCTTGGAAATTAGCTACTTCAAGTCTGCTCTGGACC GCAGGCTCCTCGACTCTCTGTGGAACAAATACTGGGTAAACACACTGGGC AGCTCGGGTCTGCTCACCAACACAGAGTACACCACCGGTCAGATCATGGA TCTCTCCGAGAAGCTGGAGCAGAGTGAGAACTTTTTAGGTCGCGGAACCG ATGTCAATGAGAAGCGTTCGGAGGATAAGCTGTCCAAGGCCACCCGAGAC TGCAGCCGCTCCACCATTGAACTGATACACGGCTTGATGGCTCAGATTGT TAAGGACAAACTTTTCAACAAGGTCGGACTGGGCAAATAGTTCAACACTA AAATTCGCAATGAATTTTAAAATGCATTGTGAATTTTCTTTTCATTTCCC TGGGAAATATTTAAGTAAGTCAAGCTTATCCAAAAGAAAAAGGAAATTAT AAAACCGCCTCATAGGCTGATGAAAAAAAAAAAAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 12295179..12295757 | 317..895 | 2895 | 100 | Plus |
chr3R | 27901430 | chr3R | 12294810..12295126 | 1..317 | 1585 | 100 | Plus |
chr3R | 27901430 | chr3R | 12295815..12296093 | 894..1172 | 1395 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 16470492..16471070 | 317..895 | 2895 | 100 | Plus |
3R | 32079331 | 3R | 16470123..16470439 | 1..317 | 1585 | 100 | Plus |
3R | 32079331 | 3R | 16471128..16471413 | 894..1179 | 1430 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 16211323..16211901 | 317..895 | 2895 | 100 | Plus |
3R | 31820162 | 3R | 16210954..16211270 | 1..317 | 1585 | 100 | Plus |
3R | 31820162 | 3R | 16211959..16212244 | 894..1179 | 1430 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1015..1098 | 1035..1118 | 122 | 65.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 12294810..12295126 | 1..317 | 100 | -> | Plus |
chr3R | 12295180..12295756 | 318..894 | 100 | -> | Plus |
chr3R | 12295816..12296093 | 895..1172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CSN5-RA | 1..984 | 57..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CSN5-RA | 1..984 | 57..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CSN5-RA | 1..984 | 57..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CSN5-RA | 1..984 | 57..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CSN5-RA | 1..984 | 57..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CSN5-RA | 23..1194 | 1..1172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CSN5-RA | 23..1194 | 1..1172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CSN5-RA | 25..1196 | 1..1172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CSN5-RA | 23..1194 | 1..1172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CSN5-RA | 25..1196 | 1..1172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16470123..16470439 | 1..317 | 100 | -> | Plus |
3R | 16470493..16471069 | 318..894 | 100 | -> | Plus |
3R | 16471129..16471406 | 895..1172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16470123..16470439 | 1..317 | 100 | -> | Plus |
3R | 16470493..16471069 | 318..894 | 100 | -> | Plus |
3R | 16471129..16471406 | 895..1172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16470123..16470439 | 1..317 | 100 | -> | Plus |
3R | 16470493..16471069 | 318..894 | 100 | -> | Plus |
3R | 16471129..16471406 | 895..1172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 12295845..12296161 | 1..317 | 100 | -> | Plus |
arm_3R | 12296215..12296791 | 318..894 | 100 | -> | Plus |
arm_3R | 12296851..12297128 | 895..1172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16210954..16211270 | 1..317 | 100 | -> | Plus |
3R | 16211324..16211900 | 318..894 | 100 | -> | Plus |
3R | 16211960..16212237 | 895..1172 | 100 | Plus |
Translation from 2 to 1039
> LD14392.hyp ENKNLQQKTTIFGISTITMDSDAAQKTWELENNIQTLPSCDEIFRYDAEQ QRQIIDAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLMLGKV EDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEHAVG WYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGA FRTYPKGYKPPNEEPSEYQTIPLNKIEDFGVHCKQYYPLEISYFKSALDR RLLDSLWNKYWVNTLGSSGLLTNTEYTTGQIMDLSEKLEQSENFLGRGTD VNEKRSEDKLSKATRDCSRSTIELIHGLMAQIVKDKLFNKVGLGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CSN5-PA | 327 | CG14884-PA | 1..327 | 19..345 | 1725 | 100 | Plus |
CSN5-PB | 325 | CG14884-PB | 1..325 | 19..345 | 1701 | 99.4 | Plus |
Rpn11-PA | 308 | CG18174-PA | 27..256 | 68..291 | 376 | 38 | Plus |
Translation from 56 to 1039
> LD14392.pep MDSDAAQKTWELENNIQTLPSCDEIFRYDAEQQRQIIDAKPWEKDPHFFK DIKISALALLKMVMHARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGT ETRVNAQAQAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVS TQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRTYPKGYKPPNEEPSEY QTIPLNKIEDFGVHCKQYYPLEISYFKSALDRRLLDSLWNKYWVNTLGSS GLLTNTEYTTGQIMDLSEKLEQSENFLGRGTDVNEKRSEDKLSKATRDCS RSTIELIHGLMAQIVKDKLFNKVGLGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18500-PA | 320 | GF18500-PA | 1..320 | 1..327 | 1709 | 96.6 | Plus |
Dana\GF14156-PA | 308 | GF14156-PA | 29..269 | 52..293 | 379 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17007-PA | 327 | GG17007-PA | 1..327 | 1..327 | 1774 | 99.7 | Plus |
Dere\GG24318-PA | 308 | GG24318-PA | 29..256 | 52..273 | 378 | 38.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19288-PA | 327 | GH19288-PA | 1..327 | 1..327 | 1750 | 98.2 | Plus |
Dgri\GH10267-PA | 308 | GH10267-PA | 29..256 | 52..273 | 376 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CSN5-PA | 327 | CG14884-PA | 1..327 | 1..327 | 1725 | 100 | Plus |
CSN5-PB | 325 | CG14884-PB | 1..325 | 1..327 | 1701 | 99.4 | Plus |
Rpn11-PA | 308 | CG18174-PA | 27..256 | 50..273 | 376 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23503-PA | 327 | GI23503-PA | 1..327 | 1..327 | 1747 | 97.9 | Plus |
Dmoj\GI15638-PA | 308 | GI15638-PA | 29..256 | 52..273 | 376 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22178-PA | 327 | GL22178-PA | 1..327 | 1..327 | 1763 | 99.1 | Plus |
Dper\GL26475-PA | 308 | GL26475-PA | 29..256 | 52..273 | 381 | 38.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13321-PA | 327 | GA13321-PA | 1..327 | 1..327 | 1763 | 99.1 | Plus |
Dpse\GA14824-PA | 308 | GA14824-PA | 29..256 | 52..273 | 378 | 38.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15160-PA | 327 | GM15160-PA | 1..327 | 1..327 | 1778 | 100 | Plus |
Dsec\GM18036-PA | 308 | GM18036-PA | 29..256 | 52..273 | 378 | 38.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19103-PA | 321 | GD19103-PA | 1..321 | 1..327 | 1728 | 98.2 | Plus |
Dsim\GD22663-PA | 308 | GD22663-PA | 29..256 | 52..273 | 378 | 38.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10255-PA | 327 | GJ10255-PA | 1..327 | 1..327 | 1743 | 97.6 | Plus |
Dvir\GJ10111-PA | 308 | GJ10111-PA | 29..256 | 52..273 | 376 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14483-PA | 327 | GK14483-PA | 1..327 | 1..327 | 1768 | 99.4 | Plus |
Dwil\GK19363-PA | 111 | GK19363-PA | 1..106 | 213..320 | 530 | 93.5 | Plus |
Dwil\GK24437-PA | 322 | GK24437-PA | 8..115 | 39..177 | 425 | 64 | Plus |
Dwil\GK23790-PA | 308 | GK23790-PA | 29..256 | 52..273 | 378 | 38.4 | Plus |