BDGP Sequence Production Resources |
Search the DGRC for LD14594
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 145 |
Well: | 94 |
Vector: | pBS SK- |
Associated Gene/Transcript | RpIII128-RA |
Protein status: | LD14594.pep: gold |
Preliminary Size: | 3456 |
Sequenced Size: | 3504 |
Gene | Date | Evidence |
---|---|---|
CG8344 | 2001-01-01 | Release 2 assignment |
CG8344 | 2002-06-10 | Blastp of sequenced clone |
CG8344 | 2003-01-01 | Sim4 clustering to Release 3 |
RpIII128 | 2008-04-29 | Release 5.5 accounting |
RpIII128 | 2008-08-15 | Release 5.9 accounting |
RpIII128 | 2008-12-18 | 5.12 accounting |
3504 bp (3504 high quality bases) assembled on 2002-06-10
GenBank Submission: AY121645
> LD14594.complete ACAAACTTAAATTAAATTATTATAACGAAATGGTGGAGCTAAAGATGGGC GATCACAACGTGGAGGCCACCACCTGGGATCCCGGCGACAGCAAGGACTG GTCGGTGCCCATTAAGCCGCTAACGGAGAAGTGGAAATTGGTGCCGGCAT TCTTGCAAGTAAAAGGATTAGTGAAGCAGCACATTGATTCCTTCAATCAC TTCATCAACGTGGACATAAAAAAGATTGTGAAGGCTAACGAGCTGGTTAC CAGTGGAGCTGATCCTTTGTTTTACCTAAAGTACTTGGATGTGCGGGTGG GCAAGCCGGACATCGACGATGGCTTCAACATCACCAAAGCGACCACACCG CACGAATGCCGTCTGAGGGACACCACGTACTCCGCCCCCATCACCGTGGA CATCGAGTACACGAGGGGAACCCAGCGGATCAAGCGGAATAATTTGCTCA TCGGAAGGATGCCCCTCATGCTGCGCTGCTCCAATTGCGCCCTTACCGGC AAGTCGGAGTTCGAGCTGTCCAAACTGAATGAGTGTCCACTAGATCCTGG CGGCTACTTTGTGGTGCGAGGTCAGGAGAAGGTTATCCTCATTCAGGAGC AGCTGTCATGGAACAAGATGCTCACCGAGGACTTCAACGGTGTGGTGCAA TGCCAGGTTACCTCCTCCACACACGAAAAGAAGTCACGTACTTTGGTGTT GAGCAAGCATGGAAAGTACTACCTCAAGCACAACTCGATGACGGACGACA TACCCATTGTGGTGATCTTTAAAGCTCTGGGCGTAGTTTCCGATCAGGAA ATTCAATCGCTAATTGGCATTGACAGCAAATCGCAGAATAGATTCGGTGC CTCTCTAATAGACGCCTACAACCTGAAGGTCTTCACACAGCAAAGGGCTT TGGAGTACATGGGCTCCAAGTTGGTGGTCAAGCGTTTTCAGAGTGCCACC ACAAAAACGCCATCGGAAGAGGCCCGTGAGCTGCTGTTAACTACCATTTT GGCGCATGTGCCTGTGGACAACTTTAACTTGCAAATGAAGGCCATCTATG TATCCATGATGGTGCGTCGTGTTATGGCCGCCGAGCTGGACAAAACGCTC TTTGACGACCGCGATTACTACGGCAACAAGCGACTGGAGCTGGCAGGTTC TTTGCTCTCCATGATGTTCGAGGATCTGTTCAAGCGCATGAACTGGGAGC TTAAGACCATTGCGGACAAAAATATACCCAAGGTGAAGGCGGCGCAGTTC GATGTGGTCAAGCACATGAGGGCGGCACAAATCACAGCGGGACTGGAGTC TGCTATCAGTTCCGGCAACTGGACGATCAAGAGATTTAAGATGGAAAGAG CTGGCGTAACGCAGGTTCTGTCCCGTTTGAGTTATATCTCAGCGTTGGGA ATGATGACGCGTGTGAACTCGCAGTTTGAGAAGACGCGTAAGGTGTCGGG ACCCAGATCTCTGCAGCCCAGTCAATGGGGTATGCTGTGTCCCTCGGACA CTCCAGAAGGTGAGGCCTGTGGTCTGGTCAAAAATCTGGCTCTGATGACG CACATCACCACCGAAGTTGAGGAGCGACCCGTTATGATAGTGGCTTTCAA TGCTGGCGTGGAAGACATACGAGAAGTGAGCGGTAACCCCATCAATAACC CGAATGTATTCCTCGTCTTCATCAATGGTAATGTTCTGGGTCTCACCTTG AACCACAAGCACCTGGTGCGGAACCTTCGTTACATGCGCAGAAAGGGTCG GATGGGCAGCTACGTGTCTGTGCACACATCATACACCCAGCGATGCATCT ACATCCACACGGATGGCGGTCGTCTGTGCCGCCCCTATGTAATTGTGGAG AACCGTCGCCCGCTGGTGAAGCAGCATCACCTGGACGAGCTGAATCGAGG GATTCGTAAGTTCGACGACTTTCTCTTGGACGGACTAATCGAGTATTTAG ATGTGAACGAGGAGAACGATTCGTTTATCGCCTGGAACGAGGATCAAATA GAGGACCGGACTACACACTTGGAAATCGAACCCTTCACTTTGCTGGGAGT TTGTGCTGGATTGGTGCCCTATCCTCATCACAATCAGAGTCCCAGGAACA CCTATCAGTGTGCTATGGGTAAGCAGGCGATGGGAATGATTGGCTATAAC CAGAAGAACAGGATTGACTCGCTGATGTATAATCTGGTGTATCCCCATGC TCCTATGGTGAAATCCAAGACTATCGAGCTTACCAACTTTGACAAATTGC CTGCTGGTCAGAATGCCACTGTGGCAGTTATGAGTTACTCTGGCTACGAC ATCGAAGATGCGCTGATCTTAAACAAGGCGTCGATAGATCGGGGATATGG ACGCTGTCTGGTGTACAAAAACTCAAAGTGCACTGTGAAACGGTATGCGA ATCAAACCTTCGACAGAATCATGGGTCCCATGAAAGATGCGCTGACGAAC AAGGTTATCTTCAAGCACGACGTTCTGGACACTGACGGAATTGTGGCTCC AGGCGAGCAGGTTCAAAACAAACAGATCATGATTAACAAGGAAATGCCCG CGGTAACATCGATGAATCCGCTGCAGGGTCAGTCTGCACAGGTTCCCTAC ACCGCAGTACCCATTAGCTATAAGGGTCCCGAGCCCAGTTACATCGAACG CGTTATGGTTTCCGCCAATGCCGAGGAAGACTTTCTCATCAAGATCCTGC TGCGCCAGACACGTATCCCCGAGATCGGGGACAAGTTCAGCTCTCGGCAC GGACAAAAAGGCGTGACTGGGTTGATTGTTGAACAGGAGGATATGCCCTT TAATGACTTCGGCATCTGCCCGGATATGATAATGAACCCACACGGATTCC CCTCCCGTATGACAGTGGGTAAAACGTTAGAGCTGCTCGGCGGGAAGGCT GGTCTCCTGGAGGGCAAGTTCCACTATGGAACTGCGTTCGGGGGCTCCAA GGTGGAAGACATTCAGGCGGAACTGGAGCGCCATGGTTTCAACTACGTGG GCAAGGACTTTTTCTACTCCGGCATCACAGGAACACCACTGGAGGCCTAC ATCTACTCGGGACCCGTGTACTACCAAAAACTGAAGCATATGGTGCAGGA TAAGATGCATGCCCGTGCCCGGGGACCCAAGGCGGTGCTCACCCGTCAGC CGACGCAGGGCAGGAGTCGTGAGGGTGGCCTTCGTCTGGGCGAAATGGAA CGGGATTGTCTCATTTCTTACGGAGCTAGTATGCTGATCATGGAGCGTCT GATGATCTCATCGGATGCCTTTGAGGTGGATGTTTGCCGGACTTGCGGCA GGATGGCCTACTGCTCCTGGTGTCATTTCTGCCAGTCGTCGGCCAATGTC TCTAAGATATCCATGCCGTATGCATGCAAACTGCTCTTCCAGGAGTTGAC CAGCATGAATGTGGTGCCGAAAATGATTTTGGAAAACTATTAACGATGCA ATGGCCTGAAACCGAATAAAATAATTGTTATATAAAAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpIII128-RA | 3681 | RpIII128-RA | 138..3622 | 1..3485 | 17425 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7926311..7927222 | 1..912 | 99 | -> | Plus |
chr2R | 7927274..7929823 | 913..3462 | 99 | <- | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpIII128-RA | 1..3414 | 30..3443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpIII128-RA | 1..3414 | 30..3443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpIII128-RA | 1..3414 | 30..3443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpIII128-RA | 1..3414 | 30..3443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpIII128-RA | 1..3414 | 30..3443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpIII128-RA | 1..3483 | 1..3483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpIII128-RA | 1..3483 | 1..3483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpIII128-RA | 1..3483 | 1..3483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpIII128-RA | 1..3483 | 1..3483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpIII128-RA | 50..3532 | 1..3483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12039090..12040001 | 1..912 | 100 | -> | Plus |
2R | 12040053..12042623 | 913..3483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12039090..12040001 | 1..912 | 100 | -> | Plus |
2R | 12040053..12042623 | 913..3483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12039090..12040001 | 1..912 | 100 | -> | Plus |
2R | 12040053..12042623 | 913..3483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7926595..7927506 | 1..912 | 100 | -> | Plus |
arm_2R | 7927558..7930128 | 913..3483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12040289..12041200 | 1..912 | 100 | -> | Plus |
2R | 12041252..12043822 | 913..3483 | 100 | Plus |
Translation from 2 to 3442
> LD14594.hyp KLKLNYYNEMVELKMGDHNVEATTWDPGDSKDWSVPIKPLTEKWKLVPAF LQVKGLVKQHIDSFNHFINVDIKKIVKANELVTSGADPLFYLKYLDVRVG KPDIDDGFNITKATTPHECRLRDTTYSAPITVDIEYTRGTQRIKRNNLLI GRMPLMLRCSNCALTGKSEFELSKLNECPLDPGGYFVVRGQEKVILIQEQ LSWNKMLTEDFNGVVQCQVTSSTHEKKSRTLVLSKHGKYYLKHNSMTDDI PIVVIFKALGVVSDQEIQSLIGIDSKSQNRFGASLIDAYNLKVFTQQRAL EYMGSKLVVKRFQSATTKTPSEEARELLLTTILAHVPVDNFNLQMKAIYV SMMVRRVMAAELDKTLFDDRDYYGNKRLELAGSLLSMMFEDLFKRMNWEL KTIADKNIPKVKAAQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERA GVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDT PEGEACGLVKNLALMTHITTEVEERPVMIVAFNAGVEDIREVSGNPINNP NVFLVFINGNVLGLTLNHKHLVRNLRYMRRKGRMGSYVSVHTSYTQRCIY IHTDGGRLCRPYVIVENRRPLVKQHHLDELNRGIRKFDDFLLDGLIEYLD VNEENDSFIAWNEDQIEDRTTHLEIEPFTLLGVCAGLVPYPHHNQSPRNT YQCAMGKQAMGMIGYNQKNRIDSLMYNLVYPHAPMVKSKTIELTNFDKLP AGQNATVAVMSYSGYDIEDALILNKASIDRGYGRCLVYKNSKCTVKRYAN QTFDRIMGPMKDALTNKVIFKHDVLDTDGIVAPGEQVQNKQIMINKEMPA VTSMNPLQGQSAQVPYTAVPISYKGPEPSYIERVMVSANAEEDFLIKILL RQTRIPEIGDKFSSRHGQKGVTGLIVEQEDMPFNDFGICPDMIMNPHGFP SRMTVGKTLELLGGKAGLLEGKFHYGTAFGGSKVEDIQAELERHGFNYVG KDFFYSGITGTPLEAYIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQP TQGRSREGGLRLGEMERDCLISYGASMLIMERLMISSDAFEVDVCRTCGR MAYCSWCHFCQSSANVSKISMPYACKLLFQELTSMNVVPKMILENY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpIII128-PA | 1137 | CG8344-PA | 1..1137 | 10..1146 | 5944 | 100 | Plus |
RpII140-PB | 1176 | CG3180-PB | 28..1175 | 44..1143 | 1890 | 36.7 | Plus |
RpII140-PA | 1176 | CG3180-PA | 28..1175 | 44..1143 | 1890 | 36.7 | Plus |
RpI135-PA | 1129 | CG4033-PA | 39..1120 | 60..1137 | 967 | 26.7 | Plus |
Translation from 29 to 3442
> LD14594.pep MVELKMGDHNVEATTWDPGDSKDWSVPIKPLTEKWKLVPAFLQVKGLVKQ HIDSFNHFINVDIKKIVKANELVTSGADPLFYLKYLDVRVGKPDIDDGFN ITKATTPHECRLRDTTYSAPITVDIEYTRGTQRIKRNNLLIGRMPLMLRC SNCALTGKSEFELSKLNECPLDPGGYFVVRGQEKVILIQEQLSWNKMLTE DFNGVVQCQVTSSTHEKKSRTLVLSKHGKYYLKHNSMTDDIPIVVIFKAL GVVSDQEIQSLIGIDSKSQNRFGASLIDAYNLKVFTQQRALEYMGSKLVV KRFQSATTKTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSMMVRRVMA AELDKTLFDDRDYYGNKRLELAGSLLSMMFEDLFKRMNWELKTIADKNIP KVKAAQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRL SYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLV KNLALMTHITTEVEERPVMIVAFNAGVEDIREVSGNPINNPNVFLVFING NVLGLTLNHKHLVRNLRYMRRKGRMGSYVSVHTSYTQRCIYIHTDGGRLC RPYVIVENRRPLVKQHHLDELNRGIRKFDDFLLDGLIEYLDVNEENDSFI AWNEDQIEDRTTHLEIEPFTLLGVCAGLVPYPHHNQSPRNTYQCAMGKQA MGMIGYNQKNRIDSLMYNLVYPHAPMVKSKTIELTNFDKLPAGQNATVAV MSYSGYDIEDALILNKASIDRGYGRCLVYKNSKCTVKRYANQTFDRIMGP MKDALTNKVIFKHDVLDTDGIVAPGEQVQNKQIMINKEMPAVTSMNPLQG QSAQVPYTAVPISYKGPEPSYIERVMVSANAEEDFLIKILLRQTRIPEIG DKFSSRHGQKGVTGLIVEQEDMPFNDFGICPDMIMNPHGFPSRMTVGKTL ELLGGKAGLLEGKFHYGTAFGGSKVEDIQAELERHGFNYVGKDFFYSGIT GTPLEAYIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGG LRLGEMERDCLISYGASMLIMERLMISSDAFEVDVCRTCGRMAYCSWCHF CQSSANVSKISMPYACKLLFQELTSMNVVPKMILENY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12287-PA | 1137 | GF12287-PA | 1..1137 | 1..1137 | 5962 | 95.6 | Plus |
Dana\GF16238-PA | 1176 | GF16238-PA | 28..1175 | 35..1134 | 1954 | 36.6 | Plus |
Dana\GF20648-PA | 1129 | GF20648-PA | 20..1120 | 34..1128 | 988 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20240-PA | 1137 | GG20240-PA | 1..1137 | 1..1137 | 6159 | 99.5 | Plus |
Dere\GG16840-PA | 1176 | GG16840-PA | 28..1175 | 35..1134 | 1946 | 36.5 | Plus |
Dere\GG24715-PA | 1129 | GG24715-PA | 20..1120 | 34..1128 | 988 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20856-PA | 1137 | GH20856-PA | 1..1137 | 1..1137 | 5812 | 93.1 | Plus |
Dgri\GH19704-PA | 1175 | GH19704-PA | 27..1174 | 35..1134 | 1944 | 36.5 | Plus |
Dgri\GH11221-PA | 1125 | GH11221-PA | 3..1116 | 20..1128 | 997 | 26.8 | Plus |
Dgri\GH25170-PA | 267 | GH25170-PA | 1..266 | 876..1134 | 674 | 47 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpIII128-PA | 1137 | CG8344-PA | 1..1137 | 1..1137 | 5944 | 100 | Plus |
RpII140-PB | 1176 | CG3180-PB | 28..1175 | 35..1134 | 1890 | 36.7 | Plus |
RpII140-PA | 1176 | CG3180-PA | 28..1175 | 35..1134 | 1890 | 36.7 | Plus |
RpI135-PA | 1129 | CG4033-PA | 39..1120 | 51..1128 | 967 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20961-PA | 1136 | GI20961-PA | 1..1136 | 1..1137 | 5824 | 93.5 | Plus |
Dmoj\GI23040-PA | 1176 | GI23040-PA | 28..1175 | 35..1134 | 1951 | 36.6 | Plus |
Dmoj\GI21635-PA | 1122 | GI21635-PA | 2..1113 | 22..1128 | 1004 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17093-PA | 1137 | GL17093-PA | 1..1137 | 1..1137 | 5885 | 94.1 | Plus |
Dper\GL24239-PA | 1176 | GL24239-PA | 28..1175 | 35..1134 | 1955 | 36.6 | Plus |
Dper\GL18874-PA | 1127 | GL18874-PA | 17..1118 | 34..1128 | 928 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21006-PA | 1137 | GA21006-PA | 1..1137 | 1..1137 | 5886 | 94.1 | Plus |
Dpse\GA16485-PA | 1176 | GA16485-PA | 28..1175 | 35..1134 | 1955 | 36.6 | Plus |
Dpse\GA17896-PA | 1126 | GA17896-PA | 17..1117 | 34..1128 | 988 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21328-PA | 1137 | GM21328-PA | 1..1137 | 1..1137 | 6163 | 99.6 | Plus |
Dsec\GM24152-PA | 1176 | GM24152-PA | 28..1175 | 35..1134 | 1946 | 36.5 | Plus |
Dsec\GM16738-PA | 1129 | GM16738-PA | 20..1120 | 34..1128 | 984 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10835-PA | 1137 | GD10835-PA | 1..1137 | 1..1137 | 6163 | 99.6 | Plus |
Dsim\GD18948-PA | 1176 | GD18948-PA | 28..1175 | 35..1134 | 1947 | 36.5 | Plus |
Dsim\GD23021-PA | 1129 | GD23021-PA | 20..1120 | 34..1128 | 989 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20682-PA | 1137 | GJ20682-PA | 1..1137 | 1..1137 | 5834 | 93.6 | Plus |
Dvir\RpII140-PA | 1176 | GJ24629-PA | 28..1175 | 35..1134 | 1950 | 36.6 | Plus |
Dvir\GJ17773-PA | 1122 | GJ17773-PA | 13..1113 | 34..1128 | 983 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21338-PA | 999 | GK21338-PA | 1..999 | 139..1137 | 5098 | 92.7 | Plus |
Dwil\GK12191-PA | 1176 | GK12191-PA | 28..1175 | 35..1134 | 1954 | 36.6 | Plus |
Dwil\GK24411-PA | 1122 | GK24411-PA | 13..1113 | 34..1128 | 994 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12399-PA | 1137 | GE12399-PA | 1..1137 | 1..1137 | 6154 | 99.4 | Plus |
Dyak\GE24221-PA | 1176 | GE24221-PA | 28..1175 | 35..1134 | 1947 | 36.5 | Plus |
Dyak\GE16780-PA | 1129 | GE16780-PA | 20..1120 | 34..1128 | 991 | 27.2 | Plus |