Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
LD14822.complete Sequence
2548 bp (2548 high quality bases) assembled on 2004-10-22
GenBank Submission: BT016107
> LD14822.complete
ATGCGGCACCGCTGACATTGAAAAGGCGAGAATTAAGCGATAATTGATTG
CAGTTTGAAATAGGAGCGAGAGAGTGCATGGGTAAAAATCAATACAGGGA
GCACGCCGATGGAGCAGCGCGCCAACTTTCTGGCTCTGACCCTCCTGGAC
GCCCTGGAGGACGAGAACGAGGCTGATATAATGTCGATGCTGGAGAGGAA
CAGCATAAATGCTGGCATCGTGCCCTGCGATCGAGGACTGGCTCCCTTGC
ACTACGTGTGCGGCATGCGAAACGGGGGACTGGCCCAGCGAATCCTGGAG
CGGTTTCTCGAGTGCCCCGACCTCGACGTGAATGCCTTGTGCGACGGCCA
GACCACGGCGCTGCACATCGCTAGCATTTATGGGCGGACGGAACTGGTTA
GGATGCTGCTGGAGCGCGGAGCTTGCGCGGACCTGGCTGATGAGGATAAT
AAGCTGCCAGTTCACTACGCCATTGAAGAGTGCCACTTTGAGGTGCTGCA
GCTGCTCCGGGATCACATCTTCCGCGAGAGGCAGATCCAGAAAAAGCAGC
AACAGCGAGTCCAGGTGGTTGACGCTCTAACCCCCAATCAGCCTAGGTAC
AATCACGATGTAACTTCCCCGTACTATATTAATATCACTCACAGGCGGCA
TCGACCGCAGCCGAAGTTTCCGGAGCCAACGGAGGTGGAGTGCGCCGACA
TTCCACCCCTGCCCGATGAGGAGTCTGTGAACCTGTTTGCCCTCACTGAA
GCTCACCTTACCCAACTCATCCAGAGCCAACGGCAGAACCAGCCGGAAGA
TCCTTGTCAGCCAAAGCGGCGAACTCTTATTGAAAGCTGGCGTGAGAAGG
TGGAACGCTCGCGCGCCCGCCAGTCCCTGTTCCATCAGTACGATGAGCAT
GTGGAAGCGATGGTGGATGATGCTATTAGTCAGGAGGACTTCAACTATAA
GGAGCACCTGCAGAAAAAGCTCAGAGACGAGGACAATTCGAAGAATCTGA
CAGAGGATGCACCCAACTCGGGTCGTCAGGTGTTCGAGATGCTAGTGGAG
CAAGTCTCTCAGGCTGTCGTCGTGGAGCCGGAACCGGAGCACAGTTTCTT
TACAGCTCAGGGCGACGAGGTGGACGTGGCGGAGAGCTCAGCACGCCAGG
ATGAGTACTTTCTGCAAATCAAGGAGGCCTACGTTCACACCGACGACGAG
AATGGGTTAGTTTTCTACGAAGCGAGATACCTACAAAACAGGGACAGGCG
GGAGCCAGTCGAGCAAACTCCCAAAGAGAGGAAGCACGATTTGGAAAGCT
CCGTGAGCACTAATTATACCCTGCCACTTGACTACGAAACGGACGCCCTG
CGCCGGGAGTTGACACAGCTAGGGGCTCCGGTGGGTCCCATTACCAAAAC
AACTAAGCGGCTGTACATCAAGCAGCTAATCAAATACAAGCGCAATACGG
AGGCGCTGCTGGCCGCCCAAAAACACGCCCAGGATGCGCAGATCCGATAC
TCGGTAGAGCTTCATCGCACGCTGCGGTCGCCAGAGGACTTTGCGAGGAT
CAATGATTACTTGCCGCATGAAGCAACCTCTGCAGCGCATTTCGCACAGT
GTGGGGTGACAAAAAAGAACATGCGAGAGGGGCACCTTAAACAGAGCTTC
ATCTACATGTTGATTGATCCACGCATTTCTCGGAATCTGCCTGGGGAGAG
CGCTTTTCTCGAAAAGTTCGGGGTTTGGCAGCGTTTTCTGGACTCCATTT
TTTACATAGGCAAGGGTAAATGTTCGCGACCGTACGCTCACCTTTACGAT
GCCATGCGGCAGCACACACGCCTTCACCAGAAGCGCGAAAAAGATAAGAC
AAATAGGGAACGCGGCGGCGGATTCCGCACCCTACAGCCAGATGTTTTCC
GCTCCCCTCCACCGGGAGATGGAAAGATGGGAAGCCGTAAGCTGGAGCGC
ATCCTGGACATTTGGCAACATGGCAGTGGAGTCGTATGTCTTCATGTCTT
TCACAACATCTTGCCAATTGATGCATACACACGCGAAGCTTCCATTATAG
ACGCTCTGGGCTTGAATCACCTTACCAATATAAAGCGCGGCGACTACTAT
GGGCCGGCTCAGTCTTGGACCATGAAACAGAAAAAGCAACTGGGAATAGC
GCTGCTTTTCAAGGCCATGCACATCTATCTGGCGGAGGGAGAATCACAGT
TGTCGCCAAGCGACCTCCTCTGAGAACGGGAATAAAATGTGGAAAAAATA
TTTACCATTATTACAAAGTGGAACGGCGCATCTCGAATATGTTCAAAGAT
TGATCTCAAGATTAATTTTATTTAGAAAATGGGCAGAATAAAAAAATTGG
GAAATAAGTAAGGCTATTGAATTCAAGGCAACAGTTTACAAATTTAATTC
TAGCTGGACCATTAGCGGTAGCATTTTAAATGATGAGATGATTTACAAAA
TATTATTATATTAATTTTTAGTCAAATAGTTATGCAATTTGGACAGATTA
ATTTCAAATAATAAAATACGTCCATTCAAAAAAAAAAAAAAAAAAAAA
LD14822.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:56:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8679-RA | 2220 | CG8679-RA | 1..2220 | 4..2223 | 11100 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:20:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 21214536..21217062 | 2527..1 | 12620 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:02:02 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:20:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21216001..21218530 | 2530..1 | 12650 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:45:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21216001..21218530 | 2530..1 | 12650 | 100 | Minus |
Blast to na_te.dros performed 2019-03-15 22:20:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 1069..1132 | 2476..2411 | 118 | 68.7 | Minus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 3..85 | 2500..2419 | 115 | 61.4 | Minus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 7041..7123 | 2500..2419 | 115 | 61.4 | Minus |
LD14822.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:21:16 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 21214536..21217062 | 1..2527 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:49:11 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8679-RA | 1..2115 | 109..2223 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:30:12 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8679-RA | 1..2115 | 109..2223 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:15:40 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8679-RA | 1..2115 | 109..2223 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:14:07 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8679-RA | 1..2115 | 109..2223 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:18:43 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8679-RA | 1..2115 | 109..2223 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:34:30 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8679-RA | 1..2220 | 4..2223 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:30:11 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8679-RA | 1..2524 | 4..2527 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:15:40 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8679-RA | 15..2541 | 1..2527 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:14:07 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8679-RA | 1..2220 | 4..2223 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:18:43 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8679-RA | 15..2541 | 1..2527 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:21:16 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21216004..21218530 | 1..2527 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:21:16 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21216004..21218530 | 1..2527 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:21:16 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21216004..21218530 | 1..2527 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:15:40 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21216004..21218530 | 1..2527 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:50:51 Download gff for
LD14822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21216004..21218530 | 1..2527 | 100 | | Minus |
LD14822.hyp Sequence
Translation from 108 to 2222
> LD14822.hyp
MEQRANFLALTLLDALEDENEADIMSMLERNSINAGIVPCDRGLAPLHYV
CGMRNGGLAQRILERFLECPDLDVNALCDGQTTALHIASIYGRTELVRML
LERGACADLADEDNKLPVHYAIEECHFEVLQLLRDHIFRERQIQKKQQQR
VQVVDALTPNQPRYNHDVTSPYYINITHRRHRPQPKFPEPTEVECADIPP
LPDEESVNLFALTEAHLTQLIQSQRQNQPEDPCQPKRRTLIESWREKVER
SRARQSLFHQYDEHVEAMVDDAISQEDFNYKEHLQKKLRDEDNSKNLTED
APNSGRQVFEMLVEQVSQAVVVEPEPEHSFFTAQGDEVDVAESSARQDEY
FLQIKEAYVHTDDENGLVFYEARYLQNRDRREPVEQTPKERKHDLESSVS
TNYTLPLDYETDALRRELTQLGAPVGPITKTTKRLYIKQLIKYKRNTEAL
LAAQKHAQDAQIRYSVELHRTLRSPEDFARINDYLPHEATSAAHFAQCGV
TKKNMREGHLKQSFIYMLIDPRISRNLPGESAFLEKFGVWQRFLDSIFYI
GKGKCSRPYAHLYDAMRQHTRLHQKREKDKTNRERGGGFRTLQPDVFRSP
PPGDGKMGSRKLERILDIWQHGSGVVCLHVFHNILPIDAYTREASIIDAL
GLNHLTNIKRGDYYGPAQSWTMKQKKQLGIALLFKAMHIYLAEGESQLSP
SDLL*
LD14822.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:32:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8679-PA | 704 | CG8679-PA | 1..704 | 1..704 | 3700 | 100 | Plus |
CG42391-PA | 253 | CG42391-PA | 22..243 | 438..700 | 343 | 35 | Plus |
LD14822.pep Sequence
Translation from 108 to 2222
> LD14822.pep
MEQRANFLALTLLDALEDENEADIMSMLERNSINAGIVPCDRGLAPLHYV
CGMRNGGLAQRILERFLECPDLDVNALCDGQTTALHIASIYGRTELVRML
LERGACADLADEDNKLPVHYAIEECHFEVLQLLRDHIFRERQIQKKQQQR
VQVVDALTPNQPRYNHDVTSPYYINITHRRHRPQPKFPEPTEVECADIPP
LPDEESVNLFALTEAHLTQLIQSQRQNQPEDPCQPKRRTLIESWREKVER
SRARQSLFHQYDEHVEAMVDDAISQEDFNYKEHLQKKLRDEDNSKNLTED
APNSGRQVFEMLVEQVSQAVVVEPEPEHSFFTAQGDEVDVAESSARQDEY
FLQIKEAYVHTDDENGLVFYEARYLQNRDRREPVEQTPKERKHDLESSVS
TNYTLPLDYETDALRRELTQLGAPVGPITKTTKRLYIKQLIKYKRNTEAL
LAAQKHAQDAQIRYSVELHRTLRSPEDFARINDYLPHEATSAAHFAQCGV
TKKNMREGHLKQSFIYMLIDPRISRNLPGESAFLEKFGVWQRFLDSIFYI
GKGKCSRPYAHLYDAMRQHTRLHQKREKDKTNRERGGGFRTLQPDVFRSP
PPGDGKMGSRKLERILDIWQHGSGVVCLHVFHNILPIDAYTREASIIDAL
GLNHLTNIKRGDYYGPAQSWTMKQKKQLGIALLFKAMHIYLAEGESQLSP
SDLL*
LD14822.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:46:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF15569-PA | 694 | GF15569-PA | 1..694 | 1..704 | 2980 | 80.4 | Plus |
Dana\GF12314-PA | 713 | GF12314-PA | 219..377 | 514..700 | 319 | 41.5 | Plus |
Dana\GF23392-PA | 1577 | GF23392-PA | 207..315 | 19..133 | 159 | 33.9 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:46:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH11032-PA | 692 | GH11032-PA | 1..692 | 1..704 | 2214 | 64.2 | Plus |
Dgri\GH21113-PA | 636 | GH21113-PA | 129..303 | 443..657 | 254 | 32.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:12:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8679-PA | 704 | CG8679-PA | 1..704 | 1..704 | 3700 | 100 | Plus |
CG42391-PA | 253 | CG42391-PA | 22..243 | 438..700 | 343 | 35 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:46:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI17551-PA | 635 | GI17551-PA | 106..635 | 182..704 | 1623 | 61.3 | Plus |
Dmoj\GI17551-PA | 635 | GI17551-PA | 1..137 | 1..137 | 455 | 67.2 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:46:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL26365-PA | 713 | GL26365-PA | 1..713 | 1..704 | 2833 | 74.9 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:46:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA21257-PB | 713 | GA21257-PB | 1..713 | 1..704 | 2823 | 74.8 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:46:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD21643-PA | 549 | GD21643-PA | 1..35 | 1..35 | 166 | 94.3 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:46:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ15531-PA | 678 | GJ15531-PA | 1..678 | 1..704 | 2175 | 65.1 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:46:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK14681-PA | 729 | GK14681-PA | 1..729 | 1..704 | 2325 | 63.9 | Plus |