BDGP Sequence Production Resources |
Search the DGRC for LD14895
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 148 |
Well: | 95 |
Vector: | pBS SK- |
Associated Gene/Transcript | Brms1-RA |
Protein status: | LD14895.pep: gold |
Preliminary Size: | 1440 |
Sequenced Size: | 1325 |
Gene | Date | Evidence |
---|---|---|
CG4400 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4400 | 2002-05-10 | Blastp of sequenced clone |
CG4400 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4400 | 2008-04-29 | Release 5.5 accounting |
CG4400 | 2008-08-15 | Release 5.9 accounting |
CG4400 | 2008-12-18 | 5.12 accounting |
1325 bp (1325 high quality bases) assembled on 2002-05-10
GenBank Submission: AY102677
> LD14895.complete CACAGTTTAGTGTTTTTCCACAGAGTTTTCCACAGTTTCCACACTCCCCG ATTGTCGAAAGCAAACAAAAAAAGATATCGCGCTTATACCGGCGGCCACC TGCAGTCCATTGCCGAATCGGAATACGCCGAGAACAAGGAGAACCGCAAA ATCCACTCTGAAATGCCCGTGAAGAATGGCGAATCCGATGGCGAAGGCGA CGTTTCTGGCGGAGAATCGGAGCACTCGAATTCCAGCCAGCCACACGACA CCTCCGACGAGGAGGAGGCCAACGAATGCGATTCGGATGACTCCTCCGAG TTGGATGCCAGTGAAATAGACCGCCGGCGGGCAGAGCACATCGAGGATTT GCTGAGCTTGGAGCGCCAATTTAACGAGTTGCGGGAACAGTACTACGTCG AGCGCATCAATCTCATCGAACGACAATTGGCCGAGGTGCGTTCCGGGCGT TCCGAGGAGTTTGTCCAGCCGCAAAAGGAACTGGACAAGAAGTATCGCAC CAGGATCGAGGTGGCGGACGTCCTGCGCAAGTACCGACTGCAGAATATCG AGCACAAATACCAGTCCGAGGAACAAGCTGCCGTCCAGCACTTTGAGAGC GAGAAACACATGGCATTGGACAATCTGCGCGAGGAGTTCATGGAGCGCAT CCGTCGCCTGGAGGAGGATCGCCACAACGTGGACATCTCGTGGGCCGACT GGGGCACCGACAAGCGGCAGAGCAAGGTGCGCGGACCGGGTCGCAAGAAG GCCGTCACCGTCACGGGTCCCTATGTCGTGTACATGCTGCGCGAGGAGGA TATCATGGAGGACTGGACGATTATACGCAAGGCCCTCAAGCGATCCTCCT CGTCGGCCACCGCTGCTGGCACAGTTACGCCCACTTCCGGCGTAAGCGTT AGCCTGTCCGGTTTGCCAGCAATGGCAGGAGCTAGCGGATAGCGTTGGGG CGTGGCAGCTGCCGCCTACGCCCACATGACGCGTACCTGACGGCCGCGCC CGAGGAAGCAGCAGCCGTAGACGTTTATGTATCAGTAGTAGCCGTAGCAG AGCCCCCGAACCAGACTTCAAATGCGTTCATCAAAATGGCTAAGCTCCGC CACCCATCCTCACCTCCTTTTCCCGTAGATTTTAGTACGTACGTAGTTTG TACGAGTCCCACTCTCAGAATATTGTGTGTGTGTGTGTGTGTGTGTGTCT CTCCCCTCCCCCATACAGACGATGTATGTAATTTATGCTAAAAGATAAGT GCAAATAAAAGCGAACTGCAGCCAAGTGGGCATGCGTTCAACATAAATTT AAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4400-RA | 1391 | CG4400-RA | 80..1381 | 1..1302 | 6510 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 12798909..12799613 | 1300..596 | 3525 | 100 | Minus |
chrX | 22417052 | chrX | 12800171..12800522 | 352..1 | 1760 | 100 | Minus |
chrX | 22417052 | chrX | 12799859..12800103 | 597..353 | 1225 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 12907984..12908690 | 1302..596 | 3535 | 100 | Minus |
X | 23542271 | X | 12909248..12909599 | 352..1 | 1760 | 100 | Minus |
X | 23542271 | X | 12908936..12909180 | 597..353 | 1225 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 12916082..12916788 | 1302..596 | 3535 | 100 | Minus |
X | 23527363 | X | 12917346..12917697 | 352..1 | 1760 | 100 | Minus |
X | 23527363 | X | 12917034..12917278 | 597..353 | 1225 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 12798909..12799611 | 598..1300 | 96 | <- | Minus |
chrX | 12799859..12800103 | 353..597 | 100 | <- | Minus |
chrX | 12800171..12800522 | 1..352 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4400-RA | 1..780 | 163..942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4400-RA | 1..780 | 163..942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4400-RA | 1..780 | 163..942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4400-RA | 1..780 | 163..942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Brms1-RA | 1..780 | 163..942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4400-RA | 1..1299 | 2..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4400-RA | 1..1299 | 2..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4400-RA | 24..1323 | 1..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4400-RA | 1..1299 | 2..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Brms1-RA | 24..1323 | 1..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12907986..12908688 | 598..1300 | 100 | <- | Minus |
X | 12908936..12909180 | 353..597 | 100 | <- | Minus |
X | 12909248..12909599 | 1..352 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12907986..12908688 | 598..1300 | 100 | <- | Minus |
X | 12908936..12909180 | 353..597 | 100 | <- | Minus |
X | 12909248..12909599 | 1..352 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12907986..12908688 | 598..1300 | 100 | <- | Minus |
X | 12908936..12909180 | 353..597 | 100 | <- | Minus |
X | 12909248..12909599 | 1..352 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 12802019..12802721 | 598..1300 | 100 | <- | Minus |
arm_X | 12802969..12803213 | 353..597 | 100 | <- | Minus |
arm_X | 12803281..12803632 | 1..352 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12916084..12916786 | 598..1300 | 100 | <- | Minus |
X | 12917034..12917278 | 353..597 | 100 | <- | Minus |
X | 12917346..12917697 | 1..352 | 100 | Minus |
Translation from 0 to 941
> LD14895.hyp HSLVFFHRVFHSFHTPRLSKANKKRYRAYTGGHLQSIAESEYAENKENRK IHSEMPVKNGESDGEGDVSGGESEHSNSSQPHDTSDEEEANECDSDDSSE LDASEIDRRRAEHIEDLLSLERQFNELREQYYVERINLIERQLAEVRSGR SEEFVQPQKELDKKYRTRIEVADVLRKYRLQNIEHKYQSEEQAAVQHFES EKHMALDNLREEFMERIRRLEEDRHNVDISWADWGTDKRQSKVRGPGRKK AVTVTGPYVVYMLREEDIMEDWTIIRKALKRSSSSATAAGTVTPTSGVSV SLSGLPAMAGASG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Brms1-PA | 259 | CG4400-PA | 1..259 | 55..313 | 1323 | 100 | Plus |
CG14220-PB | 327 | CG14220-PB | 12..254 | 83..313 | 176 | 24.3 | Plus |
CG14220-PA | 327 | CG14220-PA | 12..254 | 83..313 | 176 | 24.3 | Plus |
Translation from 162 to 941
> LD14895.pep MPVKNGESDGEGDVSGGESEHSNSSQPHDTSDEEEANECDSDDSSELDAS EIDRRRAEHIEDLLSLERQFNELREQYYVERINLIERQLAEVRSGRSEEF VQPQKELDKKYRTRIEVADVLRKYRLQNIEHKYQSEEQAAVQHFESEKHM ALDNLREEFMERIRRLEEDRHNVDISWADWGTDKRQSKVRGPGRKKAVTV TGPYVVYMLREEDIMEDWTIIRKALKRSSSSATAAGTVTPTSGVSVSLSG LPAMAGASG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20882-PA | 261 | GF20882-PA | 1..261 | 1..259 | 1153 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19530-PA | 258 | GG19530-PA | 1..258 | 1..259 | 1273 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17617-PA | 279 | GH17617-PA | 1..232 | 1..229 | 1044 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Brms1-PA | 259 | CG4400-PA | 1..259 | 1..259 | 1323 | 100 | Plus |
CG14220-PB | 327 | CG14220-PB | 12..254 | 29..259 | 176 | 24.3 | Plus |
CG14220-PA | 327 | CG14220-PA | 12..254 | 29..259 | 176 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16273-PA | 260 | GI16273-PA | 1..260 | 1..259 | 1083 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22958-PA | 272 | GL22958-PA | 1..272 | 1..259 | 1040 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18159-PA | 272 | GA18159-PA | 1..272 | 1..259 | 1040 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11524-PA | 52 | GM11524-PA | 1..52 | 208..259 | 254 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24527-PA | 259 | GD24527-PA | 1..259 | 1..259 | 1353 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16917-PA | 269 | GJ16917-PA | 1..269 | 1..259 | 1083 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25281-PA | 265 | GK25281-PA | 1..226 | 1..227 | 1061 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16189-PA | 258 | GE16189-PA | 1..258 | 1..259 | 1300 | 95.8 | Plus |