BDGP Sequence Production Resources |
Search the DGRC for LD15123
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 151 |
Well: | 23 |
Vector: | pBS SK- |
Associated Gene/Transcript | uri-RA |
Protein status: | LD15123.pep: gold |
Sequenced Size: | 2343 |
Gene | Date | Evidence |
---|---|---|
CG11416 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11416 | 2004-10-13 | Blastp of sequenced clone |
ori | 2008-04-29 | Release 5.5 accounting |
ori | 2008-08-15 | Release 5.9 accounting |
uri | 2008-12-18 | 5.12 accounting |
2343 bp (2343 high quality bases) assembled on 2004-10-13
GenBank Submission: BT016108
> LD15123.complete AACAATGGACCGGCGAGAGGATGCTCTGCTACAGGCCCTCCAAACGAACG CCAGCGAGACAGAGCGCTGGGAAGCCTTCAAGCGCGATAATGAGAGCACC ATCCGGAACTTGGACAAGTTCGCAAAGAATCTCAGCGTGGAGGTTATGGT GCCCATTGGACGGAAGGCGCTGATGCCCGGCGAGCTGATCCACACCAACG AGCTTCTGGTGGGTCATTACGAGGGCTACTTCTCCGCCTGCTCCTCCCAC AAGGCCAAGGAGATCTGCCAGTACCGCCTGAAGCTGGCCGAGGAGCAGCT GAAGAAGCTGGCCGTGGAGAACGATCTGTGGCAGAAAAAACTCCACACTC CATTTGCGGAGGGGGCGGTTCCCAGTGGCGACCAAGTAGAAATTGTGGAG GATTTCAACGAGGAGTCTCACAACAAGTGGTTGGCGGAGCACAGAAAGCG AATGCGACAGCAAAAGCAGAAGGAGCGCCTCGAACGGGAGGCGGAACCTG TGAAGAAAGATAATGAAGTGCTGCGGAAGCTAGAAGAGCGAGAAATGATG GAGGAACTTGGTCTAGATCCAGATAATATCGACGAGGATCAGCTGCACGA TATGCTGAATCAAGAACCTCTGAAATCCACCAACGAAAGTAGTCCTAAAT CCTTAACCCAGGAAGAGGAGGATGAGCTGTGGAAGAAGCTGGAAGCCGAG GAGCAGAACGAAGCCGATGAGCTCAGCTCAGAAGCAGAAGAAAGCCTTAA AACAACGGATAACCTAGTGCGCCAGCTCATGTCCGGAGAAACAGAAACTC CATCTTCCAAAAAACGCACTGCAGGAACCAATAGAAACGTGGAAATACAG GATCCCATATCGGAAGATGATGGTGATGATGATGATGAGGGTGACCAGGA GGAAGAGGTGCGAACCATACGGGAGCAGATGTCGCTGCTACCCAACGAAG ATCGTGAGCCGTTCCTCAGAGCTCAACTGCATGTACTTAAAGCAAAAATG AGGAAGATACAAAAGGTCAACTTTATAAGCGATGAGCTGATTCACTTGAT GAATGTGGTGGTCATGCTAGAGGACGACCTACAGGACTTGGTATTTGAGC AGGAACTGGAGGCCAGCGAGGAAGAGGAGGAGGTTGTCGAAAACAATCAT CTTCCAGATGAGCCAAGCAAAGAGCTTTCGACTGTATCTGAATCCAGCAC AAATAAACGTCGCATTTCGTTTGCCCTCGACGACGAAAAACTTGAATTCA GAAGGGAGGAGACCGTTGCCGAAATGTTGCCCAATGCGAAAAAGAACTCG AGGGATATCATCAAGCTAAATGCACCTCTTAAACCGGCAGGAGATCCACA ACCCGCATCCATTAAAACAAAACGTCAAACAACCCAGGATATCTTGCAAA AAGTAGAACGAAACATTGAGTTTGTCAAGGAAAACCAGAGTGTCCAGGAC TTCGATTTACTCAATCGAATTATGGAAGAGTCTACGGGACTCATAAACAC TTTACACATAAGTTTCACACATTCCGGTGCCATACCTTCGCCCAGTAGTG ATCAAAGCGATGGCATACCTGGAAAGCCCTCTGATTTCTATGTGAGGTAT GAGAAGGACCGGGCGCGGCCTAATGATTCGTTTCCTATCTATGTGAACGG CTTTGAAGGCGAGGAGCACGTTAAAGTTCCCATAATGAGCGAAGCTGCAC GTGGATCAGCCTATGAAGATCCCAGAAGTCAGTTCTCCAAGCCCAATTCT TCGGAAATATGTTTCACACATTCCGGCTCCATAACTCCGACCAGTAATGA TCAAAGTGATGATATACCTGGAAATCCATTTGATTTCTATGAGAAGTATG AGAAGGACCGAGCGAAGTTCTCCAAGTCCAATTCCTCGGAGGGCGACGCT ACTGACCCTGAATCAGCGACCAAATCGATCCTACGAAACAAATCTGCTGT GGACCTGGAGCCGCATAATGTCAACCAGCAGCCCAAGAAGGGCAGGAAGG TCCGGAATCAAAAGAAGAAGGAGCGCACCCTAGACGATGACCTGCGCGAC ATGAGCGCCTACCAAAAGGTCATGCATGATCTTGTGGAGAAGGAGCCGAC TGCACCGGAGCCTCTGCCACCGGGCAAGTTCATCGACTCGCATGCGCCAA AGAAGCGGGTTAGCCGCTTCAAGGAGCAGCGAGCCCTTAACAAAACGTAG CGAAGAGTAAAACTTCAGCTGGATATTACTAGTATATTTGTTCAAGTTTA ATGTGAATTTGTATTACAAACACAACGCAAACAATAAACAACTACTGGTG TGGTGTACATTCGTTTTAAAATTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20451973..20453371 | 334..1732 | 6935 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 20453421..20454014 | 1730..2323 | 2910 | 99.3 | Plus |
chr2R | 21145070 | chr2R | 20451614..20451917 | 31..334 | 1505 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 20453147..20453254 | 1757..1864 | 300 | 85.2 | Plus |
chr2R | 21145070 | chr2R | 20453448..20453555 | 1508..1615 | 300 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24566041..24567439 | 334..1732 | 6995 | 100 | Plus |
2R | 25286936 | 2R | 24567489..24568085 | 1730..2326 | 2985 | 100 | Plus |
2R | 25286936 | 2R | 24565682..24565985 | 31..334 | 1520 | 100 | Plus |
2R | 25286936 | 2R | 24567215..24567322 | 1757..1864 | 300 | 85.2 | Plus |
2R | 25286936 | 2R | 24567516..24567623 | 1508..1615 | 300 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24567240..24568638 | 334..1732 | 6995 | 100 | Plus |
2R | 25260384 | 2R | 24568688..24569284 | 1730..2326 | 2985 | 100 | Plus |
2R | 25260384 | 2R | 24566881..24567184 | 31..334 | 1520 | 100 | Plus |
2R | 25260384 | 2R | 24568715..24568822 | 1508..1615 | 300 | 85.1 | Plus |
2R | 25260384 | 2R | 24568414..24568521 | 1757..1864 | 300 | 85.1 | Plus |
2R | 25260384 | 2R | 24566781..24566815 | 1..35 | 175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20451514..20451547 | 1..34 | 100 | -> | Plus |
chr2R | 20451618..20451916 | 35..333 | 99 | -> | Plus |
chr2R | 20451973..20453371 | 334..1732 | 98 | -> | Plus |
chr2R | 20453424..20454014 | 1733..2323 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uri-RA | 1..2196 | 5..2200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uri-RA | 1..2196 | 5..2200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uri-RA | 1..2196 | 5..2200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ori-RA | 1..2196 | 5..2200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uri-RA | 1..2196 | 5..2200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uri-RA | 24..2325 | 1..2302 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uri-RA | 24..2346 | 1..2323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uri-RA | 29..2351 | 1..2323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ori-RA | 24..2325 | 1..2302 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uri-RA | 29..2351 | 1..2323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24565582..24565615 | 1..34 | 100 | -> | Plus |
2R | 24565686..24565984 | 35..333 | 100 | -> | Plus |
2R | 24566041..24567439 | 334..1732 | 100 | -> | Plus |
2R | 24567492..24568082 | 1733..2323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24565582..24565615 | 1..34 | 100 | -> | Plus |
2R | 24565686..24565984 | 35..333 | 100 | -> | Plus |
2R | 24566041..24567439 | 334..1732 | 100 | -> | Plus |
2R | 24567492..24568082 | 1733..2323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24565582..24565615 | 1..34 | 100 | -> | Plus |
2R | 24565686..24565984 | 35..333 | 100 | -> | Plus |
2R | 24566041..24567439 | 334..1732 | 100 | -> | Plus |
2R | 24567492..24568082 | 1733..2323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20453105..20453138 | 1..34 | 100 | -> | Plus |
arm_2R | 20453209..20453507 | 35..333 | 100 | -> | Plus |
arm_2R | 20453564..20454962 | 334..1732 | 100 | -> | Plus |
arm_2R | 20455015..20455605 | 1733..2323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24566903..24567201 | 35..333 | 100 | -> | Plus |
2R | 24567258..24568656 | 334..1732 | 100 | -> | Plus |
2R | 24568709..24569299 | 1733..2323 | 100 | Plus | |
2R | 24566799..24566832 | 1..34 | 100 | -> | Plus |
Translation from 0 to 2199
> LD15123.hyp TMDRREDALLQALQTNASETERWEAFKRDNESTIRNLDKFAKNLSVEVMV PIGRKALMPGELIHTNELLVGHYEGYFSACSSHKAKEICQYRLKLAEEQL KKLAVENDLWQKKLHTPFAEGAVPSGDQVEIVEDFNEESHNKWLAEHRKR MRQQKQKERLEREAEPVKKDNEVLRKLEEREMMEELGLDPDNIDEDQLHD MLNQEPLKSTNESSPKSLTQEEEDELWKKLEAEEQNEADELSSEAEESLK TTDNLVRQLMSGETETPSSKKRTAGTNRNVEIQDPISEDDGDDDDEGDQE EEVRTIREQMSLLPNEDREPFLRAQLHVLKAKMRKIQKVNFISDELIHLM NVVVMLEDDLQDLVFEQELEASEEEEEVVENNHLPDEPSKELSTVSESST NKRRISFALDDEKLEFRREETVAEMLPNAKKNSRDIIKLNAPLKPAGDPQ PASIKTKRQTTQDILQKVERNIEFVKENQSVQDFDLLNRIMEESTGLINT LHISFTHSGAIPSPSSDQSDGIPGKPSDFYVRYEKDRARPNDSFPIYVNG FEGEEHVKVPIMSEAARGSAYEDPRSQFSKPNSSEICFTHSGSITPTSND QSDDIPGNPFDFYEKYEKDRAKFSKSNSSEGDATDPESATKSILRNKSAV DLEPHNVNQQPKKGRKVRNQKKKERTLDDDLRDMSAYQKVMHDLVEKEPT APEPLPPGKFIDSHAPKKRVSRFKEQRALNKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
uri-PA | 731 | CG11416-PA | 1..731 | 2..732 | 3759 | 100 | Plus |
Translation from 4 to 2199
> LD15123.pep MDRREDALLQALQTNASETERWEAFKRDNESTIRNLDKFAKNLSVEVMVP IGRKALMPGELIHTNELLVGHYEGYFSACSSHKAKEICQYRLKLAEEQLK KLAVENDLWQKKLHTPFAEGAVPSGDQVEIVEDFNEESHNKWLAEHRKRM RQQKQKERLEREAEPVKKDNEVLRKLEEREMMEELGLDPDNIDEDQLHDM LNQEPLKSTNESSPKSLTQEEEDELWKKLEAEEQNEADELSSEAEESLKT TDNLVRQLMSGETETPSSKKRTAGTNRNVEIQDPISEDDGDDDDEGDQEE EVRTIREQMSLLPNEDREPFLRAQLHVLKAKMRKIQKVNFISDELIHLMN VVVMLEDDLQDLVFEQELEASEEEEEVVENNHLPDEPSKELSTVSESSTN KRRISFALDDEKLEFRREETVAEMLPNAKKNSRDIIKLNAPLKPAGDPQP ASIKTKRQTTQDILQKVERNIEFVKENQSVQDFDLLNRIMEESTGLINTL HISFTHSGAIPSPSSDQSDGIPGKPSDFYVRYEKDRARPNDSFPIYVNGF EGEEHVKVPIMSEAARGSAYEDPRSQFSKPNSSEICFTHSGSITPTSNDQ SDDIPGNPFDFYEKYEKDRAKFSKSNSSEGDATDPESATKSILRNKSAVD LEPHNVNQQPKKGRKVRNQKKKERTLDDDLRDMSAYQKVMHDLVEKEPTA PEPLPPGKFIDSHAPKKRVSRFKEQRALNKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13629-PA | 696 | GF13629-PA | 1..696 | 1..731 | 2242 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22982-PA | 583 | GG22982-PA | 1..572 | 1..576 | 2401 | 85.6 | Plus |
Dere\GG22983-PA | 115 | GG22983-PA | 5..115 | 621..731 | 460 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20003-PA | 685 | GH20003-PA | 1..589 | 1..591 | 1372 | 53 | Plus |
Dgri\GH20003-PA | 685 | GH20003-PA | 497..685 | 584..731 | 319 | 46 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
uri-PA | 731 | CG11416-PA | 1..731 | 1..731 | 3759 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19184-PA | 687 | GI19184-PA | 1..687 | 1..731 | 1690 | 52 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10222-PA | 515 | GL10222-PA | 1..481 | 1..512 | 1311 | 54.4 | Plus |
Dper\GL20593-PA | 129 | GL20593-PA | 17..129 | 621..731 | 304 | 64.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10990-PB | 664 | GA10990-PB | 1..664 | 1..731 | 1767 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11876-PA | 726 | GM11876-PA | 1..726 | 1..731 | 3231 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11874-PA | 720 | GD11874-PA | 1..720 | 1..731 | 3113 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20246-PA | 693 | GJ20246-PA | 1..692 | 1..730 | 1721 | 52.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17110-PA | 669 | GK17110-PA | 1..575 | 1..579 | 1522 | 54.5 | Plus |
Dwil\GK17110-PA | 669 | GK17110-PA | 491..669 | 581..730 | 273 | 44.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14420-PA | 682 | GE14420-PA | 1..682 | 1..731 | 2779 | 82.4 | Plus |