Clone LD15217 Report

Search the DGRC for LD15217

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:152
Well:17
Vector:pBS SK-
Associated Gene/TranscriptPi3K68D-RB
Protein status:LD15217.pep: gold
Preliminary Size:1970
Sequenced Size:1919

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11621 2001-10-10 Blastp of sequenced clone
Pi3K68D 2008-04-29 Release 5.5 accounting
Pi3K68D 2008-08-15 Release 5.9 accounting
Pi3K68D 2008-12-18 5.12 accounting

Clone Sequence Records

LD15217.complete Sequence

1919 bp (1919 high quality bases) assembled on 2001-10-10

GenBank Submission: AY061189

> LD15217.complete
CTACTGCTTGTTGCATTCCGTTTTGTGTTATTTCGTGCTGTTCGTGTTTA
AAGTTCTTGCGCACAAGATAATTGTTTTTTTTTTATTCCCCGTCAAGGGA
AAACCTCAACCAAAAAGAGACTAGCAACGGGTGTAAAAAGCAGCGGAGGT
GACACCTCAAAAAGCAACTCAACGGACCGGACGCTTTAGACGAGGGGATA
ATGTCAAATCAAGCGCATATCGACTACGACAAACAATTCCAGGATGACCT
GGCCAAGGCGACCGCCCTGAGTCTAGAGCAGCATGCCCTCGATGACTACA
GGCGAAACAAGAAGTACGGCTCCGGGTATCAGCAAAGCTCCACCGTTGCT
GGCCGAGATTACCAGGCGGCGCAACGTAGTCAGAGCCTACATCAACCACG
ACGGCACTCGGAGGTGCATCAGGTGGCCATCAGTCCGGAGAATGCGGAAC
GATCGCGCACACCGCCGGCCCAGGGAACGGATAACGATCTGATCTGCTTC
GCAAGTCCCACCAGCAAGCAGCCAGAGAGTAGCAGTCCCTTTGGCAAACT
TATAGAGGATCTGCAGCGGATGCAGCCGACCAATCCGCAGTCGGCCCTGG
TGCCAATGGGTCCAGTTGCGTCGGCTTCGATTCCTCCTCAATACGGCTTT
CCACCTCATCAGCAACGTCCAACGGCTGCTCAGCCCACACCGTACGGCAT
GGTTGCAGGTGGAGTTGTTGGTGGACCGGCTTACGGTGACCTGCAGTTGG
TGCCTTACCAACCAGCTGCTCAGCAACAGAGGCCACTAAACAGCGAGGAG
CTGCAGCGGCTGTACAGCATGCCCGCTCAAATGGCCGTGGTTCCAGTGCC
GCAGCCAAACGCCTATATGTACTATCCCGGAGCTGTGGTTACTCCATACA
CGGCTCCCATTGTTCCCGGATCGGCTGCTTTTATGCCGCCGCAGTATCCC
GCACAGGGATATGGCTTTGGAGGTGCTTACACGCACATGGATTTGCGTCG
ACCCCAATCGCAACCAGCTCCCCAACAAACAGCACCGACAACAAGTCATC
ATCACAGCCAACCGTCCAACCATTCCACTTCCTCCCCCGCAGAGGCCAAT
GGAGTAGCCTTCCCAGCGCGTCGCCAAGTGCCCTCGACTGTCGGGGTTAG
CTCTAGTAGCCACACTGGAAACAATGGTCATTCCTCGGTCCCACGCAGGG
GCAACGATTTGATCGACCTCAACCACGAGGACTACTCCCGTGTGAGTGTG
CTGGAGGCATTCGATCCCCTGCTAAACGACAATACTGTGTCGAAAAAGTA
ATCCATTTTAATTGTCCTCTACTACTATCAGTACTACTACTACCAAAAAT
GCAAAAAAGCAACTACTTTACACCCACAACAACTACACCATCTAAAGGGT
TTCGGTTCAGATTGGTTCGTTTCGGAGGCAATGACAGATTAGTGTCTATA
ACAGCACTTACTTAGACCACCTTATTACACAAAAATACTAAAGTAATATA
TATACATATATGTATGTGCCCTCATATCGAAATTCGTGCCTTCCGCTATT
GCCGGAATAATTTTGAAGTCAGCTTATATATCGATGTCCAAAATGTCGTA
TTCAACTAGTTCGCAATGTTTGGAATTGGTTTCTATGTATATTCCCGCGA
CTGAAAACTTCAAAATTTAAAAGAATTTAACGACTGTCAATTGAAAAGTG
ATGAAATGAGAAGAATTAGTCACTTCTTTTTAATAACCATGTATTACGAA
ATGAACAAATTGTGATTTGCTGCTACATATATCCATTAATACACTTATAT
ACAAAAATAAATACATACATATGTTTAATTCTATCGTGTACCATTGTGAG
AGAACAAATAAATAATTTCTTAAACAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAA

LD15217.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
Pi3K68D-RB 1950 Pi3K68D-RB 1..1878 1..1878 9390 100 Plus
Pi3K68D-RC 6912 Pi3K68D-RC 8..1294 1..1287 6435 100 Plus
Pi3K68D-RA 7208 Pi3K68D-RA 391..1590 88..1287 6000 100 Plus
Pi3K68D-RA 7208 Pi3K68D-RA 3..89 1..87 435 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:33:21
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11778068..11779138 1234..164 5295 99.6 Minus
chr3L 24539361 chr3L 11776942..11777530 1875..1287 2945 100 Minus
chr3L 24539361 chr3L 11780812..11780894 83..1 415 100 Minus
chr3L 24539361 chr3L 11780430..11780509 167..88 400 100 Minus
chr3L 24539361 chr3L 11777947..11777999 1287..1235 265 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:02:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11787179..11788249 1234..164 5340 99.9 Minus
3L 28110227 3L 11786049..11786640 1878..1287 2960 100 Minus
3L 28110227 3L 11789922..11790008 87..1 435 100 Minus
3L 28110227 3L 11789541..11789620 167..88 400 100 Minus
3L 28110227 3L 11787058..11787110 1287..1235 265 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:33:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11780279..11781349 1234..164 5340 99.9 Minus
3L 28103327 3L 11779149..11779740 1878..1287 2960 100 Minus
3L 28103327 3L 11783022..11783108 87..1 435 100 Minus
3L 28103327 3L 11782641..11782720 167..88 400 100 Minus
3L 28103327 3L 11780158..11780210 1287..1235 265 100 Minus
Blast to na_te.dros performed 2019-03-15 13:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
blood 7410 blood BLOOD 7410bp 6819..6919 1775..1874 124 60.8 Plus
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 1004..1148 1872..1731 123 55.9 Minus
1731 4648 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). 4371..4441 1864..1794 119 69.9 Minus

LD15217.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:34:30 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11780809..11780894 1..87 98   Minus
chr3L 11776942..11777529 1288..1875 100 <- Minus
chr3L 11777947..11777999 1235..1287 100 <- Minus
chr3L 11778068..11779134 168..1234 99 <- Minus
chr3L 11780430..11780509 88..167 100 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:49:42 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
Pi3K68D-RB 1..1101 201..1301 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:46:45 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
Pi3K68D-RB 1..1101 201..1301 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:03:55 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
Pi3K68D-RB 1..1101 201..1301 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:15:32 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
Pi3K68D-RB 1..1101 201..1301 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:32:53 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
Pi3K68D-RB 1..1101 201..1301 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:30:22 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
Pi3K68D-RB 1..1875 1..1875 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:46:45 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
Pi3K68D-RB 1..1875 1..1875 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:03:55 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
Pi3K68D-RB 6..1880 1..1875 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:15:32 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
Pi3K68D-RB 1..1875 1..1875 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:32:53 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
Pi3K68D-RB 6..1880 1..1875 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:30 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11787058..11787110 1235..1287 100 <- Minus
3L 11786052..11786639 1288..1875 100 <- Minus
3L 11787179..11788245 168..1234 100 <- Minus
3L 11789541..11789620 88..167 100 <- Minus
3L 11789922..11790008 1..87 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:30 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11787058..11787110 1235..1287 100 <- Minus
3L 11786052..11786639 1288..1875 100 <- Minus
3L 11787179..11788245 168..1234 100 <- Minus
3L 11789541..11789620 88..167 100 <- Minus
3L 11789922..11790008 1..87 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:30 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11787058..11787110 1235..1287 100 <- Minus
3L 11786052..11786639 1288..1875 100 <- Minus
3L 11787179..11788245 168..1234 100 <- Minus
3L 11789541..11789620 88..167 100 <- Minus
3L 11789922..11790008 1..87 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:03:55 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11779152..11779739 1288..1875 100 <- Minus
arm_3L 11780158..11780210 1235..1287 100 <- Minus
arm_3L 11780279..11781345 168..1234 100 <- Minus
arm_3L 11782641..11782720 88..167 100 <- Minus
arm_3L 11783022..11783108 1..87 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:52:20 Download gff for LD15217.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11779152..11779739 1288..1875 100 <- Minus
3L 11780158..11780210 1235..1287 100 <- Minus
3L 11780279..11781345 168..1234 100 <- Minus
3L 11782641..11782720 88..167 100 <- Minus
3L 11783022..11783108 1..87 100   Minus

LD15217.pep Sequence

Translation from 200 to 1300

> LD15217.pep
MSNQAHIDYDKQFQDDLAKATALSLEQHALDDYRRNKKYGSGYQQSSTVA
GRDYQAAQRSQSLHQPRRHSEVHQVAISPENAERSRTPPAQGTDNDLICF
ASPTSKQPESSSPFGKLIEDLQRMQPTNPQSALVPMGPVASASIPPQYGF
PPHQQRPTAAQPTPYGMVAGGVVGGPAYGDLQLVPYQPAAQQQRPLNSEE
LQRLYSMPAQMAVVPVPQPNAYMYYPGAVVTPYTAPIVPGSAAFMPPQYP
AQGYGFGGAYTHMDLRRPQSQPAPQQTAPTTSHHHSQPSNHSTSSPAEAN
GVAFPARRQVPSTVGVSSSSHTGNNGHSSVPRRGNDLIDLNHEDYSRVSV
LEAFDPLLNDNTVSKK*

LD15217.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:00:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24513-PA 1862 GF24513-PA 1..347 1..362 1085 65.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:00:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13889-PA 1873 GG13889-PA 1..359 1..362 1644 90.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:00:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16381-PA 1883 GH16381-PA 1..361 1..362 735 52.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:40:09
Subject Length Description Subject Range Query Range Score Percent Strand
Pi3K68D-PE 366 CG11621-PE 1..366 1..366 1937 100 Plus
Pi3K68D-PB 366 CG11621-PB 1..366 1..366 1937 100 Plus
Pi3K68D-PD 1876 CG11621-PD 1..362 1..362 1919 100 Plus
Pi3K68D-PA 1876 CG11621-PA 1..362 1..362 1919 100 Plus
Pi3K68D-PC 1876 CG11621-PC 1..362 1..362 1919 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:00:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11573-PA 1885 GI11573-PA 1..356 1..362 750 52.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:00:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20823-PA 399 GL20823-PA 1..359 1..361 1011 64.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:00:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11104-PA 1890 GA11104-PA 1..363 1..362 1025 64.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:00:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24712-PA 230 GM24712-PA 1..229 1..229 1091 96.1 Plus
Dsec\GM24713-PA 1747 GM24713-PA 119..233 248..362 570 93 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:00:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12776-PA 1876 GD12776-PA 1..362 1..362 1732 95.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:00:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11253-PA 1887 GJ11253-PA 1..370 1..362 759 53 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:00:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12371-PA 1879 GK12371-PA 1..349 1..362 760 54.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:00:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20180-PA 1875 GE20180-PA 1..361 1..362 1622 91.2 Plus

LD15217.hyp Sequence

Translation from 200 to 1300

> LD15217.hyp
MSNQAHIDYDKQFQDDLAKATALSLEQHALDDYRRNKKYGSGYQQSSTVA
GRDYQAAQRSQSLHQPRRHSEVHQVAISPENAERSRTPPAQGTDNDLICF
ASPTSKQPESSSPFGKLIEDLQRMQPTNPQSALVPMGPVASASIPPQYGF
PPHQQRPTAAQPTPYGMVAGGVVGGPAYGDLQLVPYQPAAQQQRPLNSEE
LQRLYSMPAQMAVVPVPQPNAYMYYPGAVVTPYTAPIVPGSAAFMPPQYP
AQGYGFGGAYTHMDLRRPQSQPAPQQTAPTTSHHHSQPSNHSTSSPAEAN
GVAFPARRQVPSTVGVSSSSHTGNNGHSSVPRRGNDLIDLNHEDYSRVSV
LEAFDPLLNDNTVSKK*

LD15217.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:16:50
Subject Length Description Subject Range Query Range Score Percent Strand
Pi3K68D-PE 366 CG11621-PE 1..366 1..366 1937 100 Plus
Pi3K68D-PB 366 CG11621-PB 1..366 1..366 1937 100 Plus
Pi3K68D-PD 1876 CG11621-PD 1..362 1..362 1919 100 Plus
Pi3K68D-PA 1876 CG11621-PA 1..362 1..362 1919 100 Plus
Pi3K68D-PC 1876 CG11621-PC 1..362 1..362 1919 100 Plus