BDGP Sequence Production Resources |
Search the DGRC for LD15349
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 153 |
Well: | 49 |
Vector: | pBS SK- |
Associated Gene/Transcript | Pih1D1-RA |
Protein status: | LD15349.pep: gold |
Preliminary Size: | 1402 |
Sequenced Size: | 1207 |
Gene | Date | Evidence |
---|---|---|
CG5792 | 2001-01-01 | Release 2 assignment |
CG5792 | 2001-10-10 | Blastp of sequenced clone |
CG5792 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5792 | 2008-04-29 | Release 5.5 accounting |
CG5792 | 2008-08-15 | Release 5.9 accounting |
CG5792 | 2008-12-18 | 5.12 accounting |
1207 bp (1207 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061192
> LD15349.complete TCGAGTTGACAGCTCCATTCTGGCAAATAAAATTTGCGTTTTTCGCTCGT CGCTCAGCGCAAAAATAGCATTTGCATTGGATTAACTCGTAACTGGCAAT TGAAATCGTGCAGCAAAATGTCGCGTCGTTCCAATTTCATTGAGGGCAAC GACAATTTTCGCGACCAGAACCTGCGCTTTGTGCGGAACGAGTTTGAGGA CAATATTAACCAGTACTTTGGAGGCGCCGATCCGGAGGGCAGCGGCCCGC AGCAGAAACCGCCGCCGCGAGACTCGCTGATTGTCCAGCCGACCGCAGGA ATCTGCGTGAAAAGCTTCAAGACAAACAGTGATGAAAAGTTCTTCATTAA CGTGTGCCAGGCAGCGGAAGTTCCAGCACCGCAGGATGTCACCGAGGAGG AACTGATTGGCATACTGGAATCCACTACTCCTGGCTCCTATCGAGTGCCC ATGAGCATCTCAGATCCCAGATTCACGAAGGATCGTTCCGATAAGACCGT CGATGTCTGCGACATCGCTATCAACCCAAAGTTTCTGGTAAAGATCCAGA AGTCGCAGCTCTTCAAGAACTTCTTTATGCAAATTGTGATTGAGGCGATG AGCGAAAAGTATAATGTGCAGCTCAACATGGAAAAGACCATTATTCTGAA CAATCGCAAGTTCATCGGCACTTTGGTCACTCATCGTGTGCGCAACGAAG ATATGAAAAGGGCCCAGTCTACGTCCGGCATTCCTGCTGCTCTTAACAGC CGGGATGGTGGGGCTGTGGCACCGGAAAATTCCGGAAAACTGGTGCAGGA GATCGACGAGAAGGATGCTGCTGCCATAAGGAAGAGTCGACAGTCTGCAG GCGGCGGTTTTCTGGATATACAGTACAAACTTCGTGGTCGAGTTCGTGAC GAGTCCGTTGACGAAATCCATGCTGAGATCTACTTGCCCAACTACGTTTC TTCGCAGGAGTTCAGTCTCCTTGTCGGCGAGGATCGTATCGTGGTGGAAA CCCGCAAGTATGGCTATGTGTTCAACAAATTCGTCAACTACCGTCTGCAG CAGGATCGTGCACAAGCTCTGTTCGATAAGACCACCAAGATGCTTCATGT TCGCATTCCAGTGTTCAGTAACTAAAAAGGCACATAAATGAATAATGCCC GCTGTGATAATGTTAATAAAGGCGCAAATTTTACAATTTAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5792-RA | 1367 | CG5792-RA | 137..1326 | 1..1190 | 5950 | 100 | Plus |
CG5792.a | 4133 | CG5792.a | 3710..4133 | 297..720 | 2120 | 100 | Plus |
CG5792.a | 4133 | CG5792.a | 120..417 | 1..298 | 1490 | 100 | Plus |
CG5792-RD | 3745 | CG5792-RD | 137..434 | 1..298 | 1490 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 12712354..12713004 | 947..297 | 3255 | 100 | Minus |
chr2L | 23010047 | chr2L | 12720370..12720555 | 186..1 | 870 | 97.8 | Minus |
chr2L | 23010047 | chr2L | 12712149..12712292 | 1089..946 | 720 | 100 | Minus |
chr2L | 23010047 | chr2L | 12720171..12720288 | 299..182 | 530 | 96.6 | Minus |
chr2L | 23010047 | chr2L | 12711982..12712083 | 1189..1088 | 510 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12713648..12714298 | 947..297 | 3255 | 100 | Minus |
2L | 23513712 | 2L | 12721653..12721838 | 186..1 | 930 | 100 | Minus |
2L | 23513712 | 2L | 12713443..12713586 | 1089..946 | 720 | 100 | Minus |
2L | 23513712 | 2L | 12721450..12721567 | 299..182 | 575 | 99.2 | Minus |
2L | 23513712 | 2L | 12713275..12713377 | 1190..1088 | 515 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12713648..12714298 | 947..297 | 3255 | 100 | Minus |
2L | 23513712 | 2L | 12721653..12721838 | 186..1 | 930 | 100 | Minus |
2L | 23513712 | 2L | 12713443..12713586 | 1089..946 | 720 | 100 | Minus |
2L | 23513712 | 2L | 12721450..12721567 | 299..182 | 575 | 99.1 | Minus |
2L | 23513712 | 2L | 12713275..12713377 | 1190..1088 | 515 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 12711982..12712081 | 1090..1189 | 100 | <- | Minus |
chr2L | 12712149..12712292 | 946..1089 | 100 | <- | Minus |
chr2L | 12712356..12713002 | 299..945 | 100 | <- | Minus |
chr2L | 12720172..12720283 | 187..298 | 97 | <- | Minus |
chr2L | 12720370..12720555 | 1..186 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5792-RA | 1..1008 | 118..1125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5792-RA | 1..1008 | 118..1125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5792-RA | 1..1008 | 118..1125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5792-RA | 1..1008 | 118..1125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pih1D1-RA | 1..1008 | 118..1125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5792-RA | 120..1308 | 1..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5792-RA | 120..1308 | 1..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5792-RA | 6..1194 | 1..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5792-RA | 120..1308 | 1..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pih1D1-RA | 6..1194 | 1..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12713443..12713586 | 946..1089 | 100 | <- | Minus |
2L | 12713276..12713375 | 1090..1189 | 100 | <- | Minus |
2L | 12713650..12714296 | 299..945 | 100 | <- | Minus |
2L | 12721451..12721562 | 187..298 | 100 | <- | Minus |
2L | 12721653..12721838 | 1..186 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12713443..12713586 | 946..1089 | 100 | <- | Minus |
2L | 12713276..12713375 | 1090..1189 | 100 | <- | Minus |
2L | 12713650..12714296 | 299..945 | 100 | <- | Minus |
2L | 12721451..12721562 | 187..298 | 100 | <- | Minus |
2L | 12721653..12721838 | 1..186 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12713443..12713586 | 946..1089 | 100 | <- | Minus |
2L | 12713276..12713375 | 1090..1189 | 100 | <- | Minus |
2L | 12713650..12714296 | 299..945 | 100 | <- | Minus |
2L | 12721451..12721562 | 187..298 | 100 | <- | Minus |
2L | 12721653..12721838 | 1..186 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 12713276..12713375 | 1090..1189 | 100 | <- | Minus |
arm_2L | 12713443..12713586 | 946..1089 | 100 | <- | Minus |
arm_2L | 12713650..12714296 | 299..945 | 100 | <- | Minus |
arm_2L | 12721451..12721562 | 187..298 | 100 | <- | Minus |
arm_2L | 12721653..12721838 | 1..186 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12713650..12714296 | 299..945 | 100 | <- | Minus |
2L | 12721451..12721562 | 187..298 | 100 | <- | Minus |
2L | 12721653..12721838 | 1..186 | 100 | Minus | |
2L | 12713276..12713375 | 1090..1189 | 100 | <- | Minus |
2L | 12713443..12713586 | 946..1089 | 100 | <- | Minus |
Translation from 117 to 1124
> LD15349.pep MSRRSNFIEGNDNFRDQNLRFVRNEFEDNINQYFGGADPEGSGPQQKPPP RDSLIVQPTAGICVKSFKTNSDEKFFINVCQAAEVPAPQDVTEEELIGIL ESTTPGSYRVPMSISDPRFTKDRSDKTVDVCDIAINPKFLVKIQKSQLFK NFFMQIVIEAMSEKYNVQLNMEKTIILNNRKFIGTLVTHRVRNEDMKRAQ STSGIPAALNSRDGGAVAPENSGKLVQEIDEKDAAAIRKSRQSAGGGFLD IQYKLRGRVRDESVDEIHAEIYLPNYVSSQEFSLLVGEDRIVVETRKYGY VFNKFVNYRLQQDRAQALFDKTTKMLHVRIPVFSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15655-PA | 1306 | GF15655-PA | 1058..1306 | 80..335 | 944 | 73.4 | Plus |
Dana\GF15655-PA | 1306 | GF15655-PA | 1..81 | 1..79 | 247 | 65.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10239-PA | 1355 | GG10239-PA | 1082..1355 | 60..335 | 1147 | 80.1 | Plus |
Dere\GG10239-PA | 1355 | GG10239-PA | 1..61 | 1..61 | 311 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13678-PA | 766 | GH13678-PA | 492..766 | 61..335 | 924 | 65.8 | Plus |
Dgri\GH13678-PA | 766 | GH13678-PA | 1..66 | 1..61 | 226 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pih1D1-PA | 335 | CG5792-PA | 1..335 | 1..335 | 1717 | 100 | Plus |
Pih1D1-PD | 1094 | CG5792-PD | 1..60 | 1..60 | 323 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17105-PA | 344 | GI17105-PA | 1..339 | 1..335 | 1143 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19732-PA | 1610 | GL19732-PA | 1346..1609 | 62..334 | 1010 | 72.3 | Plus |
Dper\GL19732-PA | 1610 | GL19732-PA | 1..60 | 1..59 | 229 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19133-PA | 1557 | GA19133-PA | 1293..1556 | 62..334 | 1013 | 73 | Plus |
Dpse\GA19133-PA | 1557 | GA19133-PA | 1..60 | 1..59 | 229 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25987-PA | 1074 | GM25987-PA | 771..1074 | 37..335 | 1364 | 87.9 | Plus |
Dsec\GM13171-PA | 161 | GM13171-PA | 1..161 | 145..335 | 645 | 70.2 | Plus |
Dsec\GM17423-PA | 145 | GM17423-PA | 1..145 | 161..335 | 575 | 69.7 | Plus |
Dsec\GM19628-PA | 135 | GM19628-PA | 1..135 | 171..335 | 518 | 66.7 | Plus |
Dsec\GM25987-PA | 1074 | GM25987-PA | 1..61 | 1..61 | 317 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22098-PA | 1353 | GD22098-PA | 1075..1353 | 55..335 | 1311 | 90 | Plus |
Dsim\GD22098-PA | 1353 | GD22098-PA | 1..61 | 1..61 | 322 | 96.7 | Plus |
Dsim\GD22060-PA | 59 | GD22060-PA | 1..57 | 112..165 | 215 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16144-PA | 1127 | GJ16144-PA | 861..1126 | 60..333 | 939 | 66.5 | Plus |
Dvir\GJ16144-PA | 1127 | GJ16144-PA | 1..61 | 1..61 | 240 | 77.4 | Plus |
Translation from 117 to 1124
> LD15349.hyp MSRRSNFIEGNDNFRDQNLRFVRNEFEDNINQYFGGADPEGSGPQQKPPP RDSLIVQPTAGICVKSFKTNSDEKFFINVCQAAEVPAPQDVTEEELIGIL ESTTPGSYRVPMSISDPRFTKDRSDKTVDVCDIAINPKFLVKIQKSQLFK NFFMQIVIEAMSEKYNVQLNMEKTIILNNRKFIGTLVTHRVRNEDMKRAQ STSGIPAALNSRDGGAVAPENSGKLVQEIDEKDAAAIRKSRQSAGGGFLD IQYKLRGRVRDESVDEIHAEIYLPNYVSSQEFSLLVGEDRIVVETRKYGY VFNKFVNYRLQQDRAQALFDKTTKMLHVRIPVFSN*