BDGP Sequence Production Resources |
Search the DGRC for LD15362
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 153 |
Well: | 62 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG8316-RA |
Protein status: | LD15362.pep: gold |
Preliminary Size: | 2027 |
Sequenced Size: | 1974 |
Gene | Date | Evidence |
---|---|---|
CG8316 | 2001-01-01 | Release 2 assignment |
CG8316 | 2001-10-10 | Blastp of sequenced clone |
CG8316 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8316 | 2008-04-29 | Release 5.5 accounting |
CG8316 | 2008-08-15 | Release 5.9 accounting |
CG8316 | 2008-12-18 | 5.12 accounting |
1974 bp (1974 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061193
> LD15362.complete AAACATTGAACGGACAAAATATGGAAAAATATCCACTTGTCAAAGAATTT ATGGGGCAAAATTGGCCAAAAGATACCAAAATGGCGCAGCTCGAGAAGGA ACTCAAGAAAAGGAAAGAATTGATCGTCGAGGAGCAGATTGTAGGGCCGC GTTTGGAGCAGGTGCTATTCGACCTGACCTTGGTCAAGCAGTGCGCCTTG GTAGTGGAGGATAACGGTGCCGGTATGGCACAGGCCAACACCATGATACA GGACTGTATGTTCCAGATCACGCGAATTGAGGAGCTGCTCGAAATGGCCG GGCTGCAGGACATCCTCTACTACACGGTGCATCGCAAGGAGCAGGAGTTC CAGCGCAAAATTAAGCTGCAGGAGGATTTGGCCGAGCAAGAGAATCAGCA GAACACAATCCTCGAATCGCGCAGCATCGTCCAGGAATTCCGAAAAGAGC AAGCCTTAAAAAAAGAGGCAGATAAGGAGCTAGCCTCAGTGGACGACCAA CTGGACCAGTCGGATCGCGAGTGGACAATTACGCTGAGAAGTATGACGGA TAAGCTTAATAAGAAGATAGTCAGCGTTTTACAGATGGGAAAGCTGATAA ACGAATTGAAGGAAGAGTTGCAAAAAAGGAATTTGATTAAAACGGGTGTC ACTAAGGGCGCTGAACCAAGTTTGGCTGGTGTTCCATCCGCTAGCACCAT TTCACCATTTCAGTCCGCTTCGGATTTCCTCAACAACTTCATCTTTAAGA ATATCAGACCAGATGACAATAAATCCATGACGAGCGTGAATAGAGAGATC ACTACTAAGAAGCTGGAGACTCCTCTGCGATCCATTTTGATCAAATGCAA GGAGGTCGAGTCTGTTGCCATTTCCAACTCGCCAACAAAGCAAGTGCGTT TTTCTCCCTATCCAGAGATAAGCCATATCGAAGAGGAGAAATTTGAGAAG ACCGATTGGCTTTCTCCTTCAGAAGAGGCAGGTGTCCCAAATGCGGAATT AGAAGAGGACAGTGACGAAATGGAGGCCACAGACGAAGATTTTGAGGAAA TATCAGAAGAAGAATTCGAAATGGCGCTGAAAGATGAAGGATTTGAGCAG GAGGTAAAAGTAGAAAAGTCAGAAGAGGTTTTGCATCTAGAACAGGATAG ATATGATGAGAAATCTGGCTCAGAAGTCGAGGAATCCGTATCGGATGACA AGGAATCCGGAGGGGAGGCTTCAGGAGAGGAGGAGCCGGCTGATGCGGCC AAACAAGTAAAAATCGGCGAAAACCCGAAGACTGATGAGCAGCTATCCAA TGAAATTTCCGATAAACCACAAATAATTAGAGTCGACACTCTCTCTCCCT TCAAAAACATATCTTCCTGGGCCAGCGACGATATACCCAGCACCTCCAAG GGCACTCTTAATCGTTTTACTGCAACCCAGTTTATGAACTATGGTAGCAA TCGCGATGAAAACGAGGCGCCGCCTTGCAAGCGACTAAAATTGGAGGAGG AGGAGTTCCCAATGAGCCAACCAATGCCGGATTACTTTAAGCATCCGTCG TCCACATTCAACAACTTTGATGATCAATCACTTCGATTCAGCTCGCCCCA CAACAATTTTGACGATGATTACCTGCTGAACTTCAGCGATGATAATGATG TTACACCTACTGCCGCCTCGGCGTACATACTTTAAATTGTTAACGTATTT TGGTCAAAAATTAATGTATGTTCTTTATAAGAACGGACAATTAATTAATA TCCAGATACTTATTCATTCATTGCCATTTGCAATCAAAAAAAATTTCACT TCAGCTAAATTATTTGTAGCTTTATAATGAAATTAATTTGCGTACATAAT ATGCATATGTACATTTAAATCATACGTATTCAGTTCGAAAGTGCCGTTTC AGACTTATTCTTCATTTTGTCGTTGCTTATAAACTAATAAAACAATAAAT TAAGACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 17519116..17520456 | 1956..616 | 6705 | 100 | Minus |
chrX | 22417052 | chrX | 17520852..17521142 | 429..139 | 1455 | 100 | Minus |
chrX | 22417052 | chrX | 17520507..17520695 | 617..429 | 945 | 100 | Minus |
chrX | 22417052 | chrX | 17521207..17521344 | 138..1 | 690 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 17629788..17631131 | 1959..616 | 6720 | 100 | Minus |
X | 23542271 | X | 17631527..17631817 | 429..139 | 1455 | 100 | Minus |
X | 23542271 | X | 17631182..17631370 | 617..429 | 945 | 100 | Minus |
X | 23542271 | X | 17631882..17632019 | 138..1 | 690 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 17637886..17639229 | 1959..616 | 6720 | 100 | Minus |
X | 23527363 | X | 17639625..17639915 | 429..139 | 1455 | 100 | Minus |
X | 23527363 | X | 17639280..17639468 | 617..429 | 945 | 100 | Minus |
X | 23527363 | X | 17639980..17640117 | 138..1 | 690 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
invader6 | 4885 | invader6 INVADER6 4885bp | 1076..1139 | 47..110 | 140 | 68.8 | Plus |
Juan | 4236 | Juan JUAN 4236bp | 265..299 | 1629..1662 | 118 | 85.7 | Plus |
TART-A | 13424 | TART-A 13424bp | 5820..5869 | 578..627 | 115 | 70 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 17520507..17520694 | 430..617 | 100 | <- | Minus |
chrX | 17520852..17521142 | 139..429 | 100 | <- | Minus |
chrX | 17521207..17521344 | 1..138 | 100 | Minus | |
chrX | 17519116..17520454 | 618..1956 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8316-RA | 1..1665 | 21..1685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8316-RA | 1..1665 | 21..1685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8316-RA | 1..1665 | 21..1685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8316-RA | 1..1665 | 21..1685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8316-RA | 1..1665 | 21..1685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8316-RA | 2..1957 | 1..1956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8316-RA | 2..1957 | 1..1956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8316-RA | 29..1984 | 1..1956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8316-RA | 2..1957 | 1..1956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8316-RA | 29..1984 | 1..1956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17629791..17631129 | 618..1956 | 100 | <- | Minus |
X | 17631182..17631369 | 430..617 | 100 | <- | Minus |
X | 17631527..17631817 | 139..429 | 100 | <- | Minus |
X | 17631882..17632019 | 1..138 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17629791..17631129 | 618..1956 | 100 | <- | Minus |
X | 17631182..17631369 | 430..617 | 100 | <- | Minus |
X | 17631527..17631817 | 139..429 | 100 | <- | Minus |
X | 17631882..17632019 | 1..138 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17629791..17631129 | 618..1956 | 100 | <- | Minus |
X | 17631182..17631369 | 430..617 | 100 | <- | Minus |
X | 17631527..17631817 | 139..429 | 100 | <- | Minus |
X | 17631882..17632019 | 1..138 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 17525215..17525402 | 430..617 | 100 | <- | Minus |
arm_X | 17523824..17525162 | 618..1956 | 100 | <- | Minus |
arm_X | 17525560..17525850 | 139..429 | 100 | <- | Minus |
arm_X | 17525915..17526052 | 1..138 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17637889..17639227 | 618..1956 | 100 | <- | Minus |
X | 17639280..17639467 | 430..617 | 100 | <- | Minus |
X | 17639625..17639915 | 139..429 | 100 | <- | Minus |
X | 17639980..17640117 | 1..138 | 100 | Minus |
Translation from 2 to 1684
> LD15362.hyp TLNGQNMEKYPLVKEFMGQNWPKDTKMAQLEKELKKRKELIVEEQIVGPR LEQVLFDLTLVKQCALVVEDNGAGMAQANTMIQDCMFQITRIEELLEMAG LQDILYYTVHRKEQEFQRKIKLQEDLAEQENQQNTILESRSIVQEFRKEQ ALKKEADKELASVDDQLDQSDREWTITLRSMTDKLNKKIVSVLQMGKLIN ELKEELQKRNLIKTGVTKGAEPSLAGVPSASTISPFQSASDFLNNFIFKN IRPDDNKSMTSVNREITTKKLETPLRSILIKCKEVESVAISNSPTKQVRF SPYPEISHIEEEKFEKTDWLSPSEEAGVPNAELEEDSDEMEATDEDFEEI SEEEFEMALKDEGFEQEVKVEKSEEVLHLEQDRYDEKSGSEVEESVSDDK ESGGEASGEEEPADAAKQVKIGENPKTDEQLSNEISDKPQIIRVDTLSPF KNISSWASDDIPSTSKGTLNRFTATQFMNYGSNRDENEAPPCKRLKLEEE EFPMSQPMPDYFKHPSSTFNNFDDQSLRFSSPHNNFDDDYLLNFSDDNDV TPTAASAYIL*
Translation from 20 to 1684
> LD15362.pep MEKYPLVKEFMGQNWPKDTKMAQLEKELKKRKELIVEEQIVGPRLEQVLF DLTLVKQCALVVEDNGAGMAQANTMIQDCMFQITRIEELLEMAGLQDILY YTVHRKEQEFQRKIKLQEDLAEQENQQNTILESRSIVQEFRKEQALKKEA DKELASVDDQLDQSDREWTITLRSMTDKLNKKIVSVLQMGKLINELKEEL QKRNLIKTGVTKGAEPSLAGVPSASTISPFQSASDFLNNFIFKNIRPDDN KSMTSVNREITTKKLETPLRSILIKCKEVESVAISNSPTKQVRFSPYPEI SHIEEEKFEKTDWLSPSEEAGVPNAELEEDSDEMEATDEDFEEISEEEFE MALKDEGFEQEVKVEKSEEVLHLEQDRYDEKSGSEVEESVSDDKESGGEA SGEEEPADAAKQVKIGENPKTDEQLSNEISDKPQIIRVDTLSPFKNISSW ASDDIPSTSKGTLNRFTATQFMNYGSNRDENEAPPCKRLKLEEEEFPMSQ PMPDYFKHPSSTFNNFDDQSLRFSSPHNNFDDDYLLNFSDDNDVTPTAAS AYIL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18173-PA | 565 | GG18173-PA | 1..565 | 1..554 | 1711 | 62.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12960-PA | 441 | GH12960-PA | 28..299 | 22..298 | 190 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
corolla-PA | 554 | CG8316-PA | 1..554 | 1..554 | 2827 | 100 | Plus |
corolla-PB | 552 | CG8316-PB | 1..552 | 1..554 | 2798 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14631-PA | 235 | GI14631-PA | 30..217 | 87..281 | 193 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20392-PA | 478 | GL20392-PA | 1..294 | 1..298 | 236 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA29148-PA | 478 | GA29148-PA | 1..294 | 1..298 | 224 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13305-PA | 536 | GM13305-PA | 1..536 | 21..554 | 2326 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17351-PA | 536 | GD17351-PA | 1..536 | 21..554 | 2342 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19282-PA | 432 | GJ19282-PA | 3..322 | 1..339 | 246 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15583-PA | 576 | GE15583-PA | 1..573 | 1..550 | 1676 | 65.1 | Plus |