BDGP Sequence Production Resources |
Search the DGRC for LD15458
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 154 |
Well: | 58 |
Vector: | pBS SK- |
Associated Gene/Transcript | ifc-RA |
Protein status: | LD15458.pep: gold |
Preliminary Size: | 1842 |
Sequenced Size: | 1771 |
Gene | Date | Evidence |
---|---|---|
CG9078 | 2001-01-01 | Release 2 assignment |
CG9078 | 2001-10-10 | Blastp of sequenced clone |
CG9078 | 2003-01-01 | Sim4 clustering to Release 3 |
ifc | 2008-04-29 | Release 5.5 accounting |
ifc | 2008-08-15 | Release 5.9 accounting |
ifc | 2008-12-18 | 5.12 accounting |
1771 bp (1771 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061196
> LD15458.complete TTGGATGTTTGGACAGTTTCCTTCCTCGCGCCGGTCGATAATGTTGGCCA ACTAACACCGACCTGTAGCACGTCACCCGTAATAACCCATAACCGCAACC AGTCCAAGCATCCAAGATGGGACAGAAAGTTTCGCGCACCGACTTCGAGT GGGTGTACACGGAGGAGCCGCACGCCTCGCGGCGCAAGATCATACTGGAG AAGTACCCGCAGATCAAGAAGCTCTTTGGCCACGACCCGAATTTCAAGTG GGTGGCCGGCGCAATGGTGCTCACACAGATCCTGGCGCTGTTCGTCGTGA AGGACCTGTCGTGGTCGTGGCTCATCGTGGCCGCCTATTGCTTCGGCGGC ATCATCAACCACTCGTTGATGCTGGCCGTTCACGAGATCTCGCACAACCT GGCCTTTGGACACAGCAGACCTATGCACAACCGGATCTTGGGCTTCATCT GCAACCTGCCCATCGGGTTGCCCATGAGCATTTCCTTCAAAAAGTACCAT CTGGAACATCACCGTTACCAAGGTGATGAGGCAATTGACACTGACATACC CACACTGCTGGAGGCGCGCCTGTTTGACACCACATTTGGAAAATTTCTGT GGGTGTGCCTGCAGCCTTTTTTTTACATTTTCCGTCCACTGATTATTAAC CCGAAGCCACCTACACGCCTGGAGATTATTAACACCGTGGTGCAGCTAAC TTTCAACGCCCTGATCGTTTACTTTCTGGGCTGGAAGCCACTGGCCTATC TGTTGATCGGCAGTATTCTAGCAATGGGACTGCACCCGGTGGCCGGACAC TTTATCTCGGAGCACTACATGTTCGCCAAGGGCTTTGAGACGTACTCCTA CTACGGTCCGCTCAACTGGATCACCTTCAATGTGGGCTACCACAACGAGC ATCACGACTTTCCGGCGGTGCCCGGCTCCAGGCTGCCAGAGGTTAAGCGC ATCGCTAAGGAATTCTACGACACAATGCCACAGCACACCAGCTGGACCCG GGTTCTGTACGACTTCATCATGGACCCAGCAGTGGGACCTTACGCACGCG TGAAGCGACGCCAGCGCGGCCTGGCCTCCTAAGCCATCGATGCTATTCAA GGTTTCCTGCCATGAATGTAATCTCAGCGTTAGACCTAAAACGGCTTTTT TATGTATATATACACCGTAGAGACATTTACAGCGGATGCAGAAGAAATAA GGGGAACAACCACACACATAGCACCAGCTAATCTCTGTGATTAGATAAGG GGCATTCGGACACTTGCAGCGGCTGATATGAACAATTACGTGGATATAGT TTTTGGTATTATTGCTAGAGTGTGAGCTTAGTTAGGTTCGTTGGCCTAAC TGAGAGGCACTTTCGAGCGCTTTAATTAATTGTTACCTCATAAATTGGAA AGCCTGTTAAATCTAGTGTGTAATACTTGTCCTATTATACTATTGTCTTA GTATTTTCGATACATATTTATATTGCTTTCAGATCATTTATGTGCAGACA CGATTTGGTGTGATCAATCTTAATCCTTATCGCCGCCACCCTGGCCGATA GCAAGCCACTAATCAAGCAACCAACTACTATTTTTGATAGACTCTTGAAA CTGTTACCTAAGAATAAAGTCTAAATAATTTGACCGGGGTGGCTGCATGT ACAGAATACACTATAAAATTTGTAAGCAAACTAATGAAATAAATAACAAC ATCGTATTGTAACGACTCTGTGACCAATTAAACTTTTTGAAGCTTGCAAA GTTAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 5985430..5985943 | 1..514 | 100 | -> | Plus |
chr2L | 5986667..5987905 | 515..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ifc-RA | 1..966 | 117..1082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ifc-RA | 1..966 | 117..1082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ifc-RA | 1..966 | 117..1082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ifc-RA | 1..966 | 117..1082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ifc-RA | 1..966 | 117..1082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ifc-RA | 56..1808 | 1..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ifc-RA | 56..1808 | 1..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ifc-RA | 32..1784 | 1..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ifc-RA | 56..1808 | 1..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ifc-RA | 32..1784 | 1..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5986379..5986892 | 1..514 | 100 | -> | Plus |
2L | 5987616..5988854 | 515..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5986379..5986892 | 1..514 | 100 | -> | Plus |
2L | 5987616..5988854 | 515..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5986379..5986892 | 1..514 | 100 | -> | Plus |
2L | 5987616..5988854 | 515..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 5986379..5986892 | 1..514 | 100 | -> | Plus |
arm_2L | 5987616..5988854 | 515..1753 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5986379..5986892 | 1..514 | 100 | -> | Plus |
2L | 5987616..5988854 | 515..1753 | 100 | Plus |
Translation from 116 to 1081
> LD15458.hyp MGQKVSRTDFEWVYTEEPHASRRKIILEKYPQIKKLFGHDPNFKWVAGAM VLTQILALFVVKDLSWSWLIVAAYCFGGIINHSLMLAVHEISHNLAFGHS RPMHNRILGFICNLPIGLPMSISFKKYHLEHHRYQGDEAIDTDIPTLLEA RLFDTTFGKFLWVCLQPFFYIFRPLIINPKPPTRLEIINTVVQLTFNALI VYFLGWKPLAYLLIGSILAMGLHPVAGHFISEHYMFAKGFETYSYYGPLN WITFNVGYHNEHHDFPAVPGSRLPEVKRIAKEFYDTMPQHTSWTRVLYDF IMDPAVGPYARVKRRQRGLAS*
Translation from 116 to 1081
> LD15458.pep MGQKVSRTDFEWVYTEEPHASRRKIILEKYPQIKKLFGHDPNFKWVAGAM VLTQILALFVVKDLSWSWLIVAAYCFGGIINHSLMLAVHEISHNLAFGHS RPMHNRILGFICNLPIGLPMSISFKKYHLEHHRYQGDEAIDTDIPTLLEA RLFDTTFGKFLWVCLQPFFYIFRPLIINPKPPTRLEIINTVVQLTFNALI VYFLGWKPLAYLLIGSILAMGLHPVAGHFISEHYMFAKGFETYSYYGPLN WITFNVGYHNEHHDFPAVPGSRLPEVKRIAKEFYDTMPQHTSWTRVLYDF IMDPAVGPYARVKRRQRGLAS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15596-PA | 321 | GF15596-PA | 1..321 | 1..321 | 1712 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25111-PA | 321 | GG25111-PA | 1..321 | 1..321 | 1700 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11019-PA | 321 | GH11019-PA | 1..321 | 1..321 | 1654 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ifc-PA | 321 | CG9078-PA | 1..321 | 1..321 | 1742 | 100 | Plus |
ifc-PB | 102 | CG9078-PB | 1..102 | 220..321 | 569 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17538-PA | 321 | GI17538-PA | 1..321 | 1..321 | 1646 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19048-PA | 295 | GL19048-PA | 1..295 | 1..321 | 1525 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21524-PA | 321 | GA21524-PA | 1..321 | 1..321 | 1701 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18588-PA | 321 | GM18588-PA | 1..321 | 1..321 | 1705 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23376-PA | 321 | GD23376-PA | 1..321 | 1..321 | 1716 | 99.4 | Plus |
Dsim\GD17692-PA | 221 | GD17692-PA | 1..197 | 1..214 | 928 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15437-PA | 321 | GJ15437-PA | 1..321 | 1..321 | 1657 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14712-PA | 321 | GK14712-PA | 1..321 | 1..321 | 1652 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\ifc-PA | 321 | GE25800-PA | 1..321 | 1..321 | 1718 | 99.4 | Plus |