BDGP Sequence Production Resources |
Search the DGRC for LD15563
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 155 |
Well: | 63 |
Vector: | pBS SK- |
Associated Gene/Transcript | link-RA |
Protein status: | LD15563.pep: gold |
Preliminary Size: | 2321 |
Sequenced Size: | 1488 |
Gene | Date | Evidence |
---|---|---|
CG13333 | 2001-01-01 | Release 2 assignment |
CG13333 | 2001-10-10 | Blastp of sequenced clone |
CG13333 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13333 | 2008-04-29 | Release 5.5 accounting |
CG13333 | 2008-08-15 | Release 5.9 accounting |
CG13333 | 2008-12-18 | 5.12 accounting |
1488 bp (1488 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061201
> LD15563.complete CTAAAACGAGATTTGCGCCAGAGTTGAAAGTCTACTTCAAACGGTTTTGA ACTATCTCGTTGGTTAGTTGTCCTTAAACATTTGAAGTGAACGGTATGAT TGGTGTGCTAATGCGTTTTCTCTGGTCCTTGGCCATGGTGCAGTGCATCC AGGCTAGAGTGTCGATGCTGCCTCGTTTTTATGGACAAGACAGCGCTGTT ATAGTGGACATCAATAGAAAATTCCCACCTAGAATGGACTCCAAGCTGCA GAATGCCCTGTACTACAACCTGCCGGTCTACAAACTGATAAAGCCAACCA CAACAACTACGACAACCACGACGGCTGCTCCAACCTCTGGCTATCCTGCT GATCTCCTGAACATTGCTCACAACAAGCTGGGCCTCAAAGATCTGCCCAA TCTCGAGGAGCTGGGCGAGATGATTGGTACGGATGGTGCCAGCGAGACCA TAGACTATATACGCACGCTAACTGGAACGGAGGAGGGTTTGGCCCTGATG AAACAGTATCTGGATGCCCTGCACTTCGAGGAGGCGGAGGAGGAGAATGT GGCCGAGGAACAAGAGAAGGCTGAAGACGACGACGACGATGATGATGACA ACACCATGGGCAATGCCAGCTACGATGAGATGCCGCAGGAAAAATCCACC ACCACTGCAGATCCCCGTCCTGAGCTGAGTTTAATGCAGCGTTTCGGTGA CTTTGTGAAGCAGTACAACCTGTGGTCTGGTCAGGTCACCACTACCACCA CTCCTGCTCCGTTCATCGCTCGGCCAAGTGGCTCTTTCCAGCCCGTCTTT GTGGCTCCTCCTCCTGCTGGCTTGAAACCTTTTCGTCCCATCCTGGTTAG GCAGCCACTGCCGTATCACTATCCCATTCCCCTGCGTCCCGTATCGCTGG CCACCACAAAGCCAATCCAGGTGACCACCACCACCACGACCACAACCACA CCTGCCCCCGTGACCAAGCCACATCTCAACACGCCCAAGCTGATCATGCA AGAGGATGCGGAGGGCAAATACTCAACATTGCCTCCGTACATCCAGCAGT TGGCCAAAATGGCCAATATTTCGCCGCAAGTCGTGGAAATCTTTCTGGAG CGGCAGCCCAAGTTGGCGGAACTGGCCAAGCGCCTGAGCACCCTGGCACT CAGTCCCGAACAGACCCAGGCCATGGACACCCAGGTGCTCAAGGCCGTGC AGCACGCACTGAGCAACAACGATGATCTTCAGCGGCTAATCGAGGCGTCC CAGGCACTTAAGTAGGCGGAATGTGTGACTAGTCTTAAGACCATTTCAAA TGAAATACATTTTCCATAAACCAACTAGCTTAGTGATCTCATTTTGTAAT TGATTCCATATATAACACTAAAAATCAAATGAGTTTTAAAGTAATAATGG GGGTTTATTTCGAATGTGTATGATCTTACAATAAATCTATTGCAGATTGT AAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13333-RA | 1450 | CG13333-RA | 1..1450 | 1..1450 | 7250 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 9443194..9444644 | 1..1451 | 7255 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 13555893..13557343 | 1..1451 | 7255 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 13557092..13558542 | 1..1451 | 7255 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 861..905 | 555..599 | 116 | 78.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 9443194..9444645 | 1..1454 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13333-RA | 1..1170 | 96..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13333-RA | 1..1170 | 96..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
link-RA | 1..1170 | 96..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13333-RA | 1..1170 | 96..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
link-RA | 1..1170 | 96..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13333-RA | 1..1450 | 1..1450 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13333-RA | 1..1450 | 1..1450 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
link-RA | 1..1394 | 57..1450 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13333-RA | 1..1452 | 1..1454 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
link-RA | 1..1394 | 57..1450 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13555893..13557344 | 1..1454 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13555893..13557344 | 1..1454 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13555893..13557344 | 1..1454 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 9443398..9444849 | 1..1454 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13557092..13558543 | 1..1454 | 99 | Plus |
Translation from 95 to 1264
> LD15563.pep MIGVLMRFLWSLAMVQCIQARVSMLPRFYGQDSAVIVDINRKFPPRMDSK LQNALYYNLPVYKLIKPTTTTTTTTTAAPTSGYPADLLNIAHNKLGLKDL PNLEELGEMIGTDGASETIDYIRTLTGTEEGLALMKQYLDALHFEEAEEE NVAEEQEKAEDDDDDDDDNTMGNASYDEMPQEKSTTTADPRPELSLMQRF GDFVKQYNLWSGQVTTTTTPAPFIARPSGSFQPVFVAPPPAGLKPFRPIL VRQPLPYHYPIPLRPVSLATTKPIQVTTTTTTTTTPAPVTKPHLNTPKLI MQEDAEGKYSTLPPYIQQLAKMANISPQVVEIFLERQPKLAELAKRLSTL ALSPEQTQAMDTQVLKAVQHALSNNDDLQRLIEASQALK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13704-PA | 384 | GF13704-PA | 1..384 | 1..389 | 899 | 56.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20392-PA | 388 | GG20392-PA | 1..388 | 1..389 | 1557 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23158-PA | 413 | GH23158-PA | 16..413 | 15..389 | 648 | 41.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
link-PA | 389 | CG13333-PA | 1..389 | 1..389 | 2003 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18337-PA | 377 | GI18337-PA | 16..376 | 16..386 | 598 | 41.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17414-PA | 388 | GL17414-PA | 1..388 | 1..389 | 991 | 54.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12213-PA | 388 | GA12213-PA | 1..388 | 1..389 | 1002 | 55.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21479-PA | 391 | GM21479-PA | 1..391 | 1..389 | 1691 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10976-PA | 219 | GD10976-PA | 1..219 | 171..389 | 1053 | 96.3 | Plus |
Dsim\GD10975-PA | 108 | GD10975-PA | 1..106 | 1..106 | 555 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19763-PA | 389 | GJ19763-PA | 1..389 | 1..389 | 775 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15969-PA | 412 | GK15969-PA | 1..411 | 4..388 | 905 | 53.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12553-PA | 390 | GE12553-PA | 1..390 | 1..389 | 1547 | 88.2 | Plus |
Translation from 95 to 1264
> LD15563.hyp MIGVLMRFLWSLAMVQCIQARVSMLPRFYGQDSAVIVDINRKFPPRMDSK LQNALYYNLPVYKLIKPTTTTTTTTTAAPTSGYPADLLNIAHNKLGLKDL PNLEELGEMIGTDGASETIDYIRTLTGTEEGLALMKQYLDALHFEEAEEE NVAEEQEKAEDDDDDDDDNTMGNASYDEMPQEKSTTTADPRPELSLMQRF GDFVKQYNLWSGQVTTTTTPAPFIARPSGSFQPVFVAPPPAGLKPFRPIL VRQPLPYHYPIPLRPVSLATTKPIQVTTTTTTTTTPAPVTKPHLNTPKLI MQEDAEGKYSTLPPYIQQLAKMANISPQVVEIFLERQPKLAELAKRLSTL ALSPEQTQAMDTQVLKAVQHALSNNDDLQRLIEASQALK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
link-PA | 389 | CG13333-PA | 1..389 | 1..389 | 2003 | 100 | Plus |