Clone LD15705 Report

Search the DGRC for LD15705

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:157
Well:5
Vector:pBS SK-
Associated Gene/TranscriptCG33095-RA
Protein status:LD15705.pep: gold
Preliminary Size:2211
Sequenced Size:2176

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11935 2001-01-01 Release 2 assignment
CG11938 2001-01-01 Release 2 assignment
CG33095 2001-10-10 Blastp of sequenced clone
CG33095 2008-04-29 Release 5.5 accounting
CG33095 2008-08-15 Release 5.9 accounting
CG33095 2008-12-18 5.12 accounting

Clone Sequence Records

LD15705.complete Sequence

2176 bp (2176 high quality bases) assembled on 2001-10-10

GenBank Submission: AY061209

> LD15705.complete
CTTTAGCAAAAACAGTCGGGCTCATATTCAAAAGCCCAACCCTTCTCACC
ACAGTTCCCAAGCAGGGAACTATCAAGTAAATCGTGCGGAAACAGACATA
GTAAACAAAATAGGAAAGATGACCCACCATTAACCGATATGAAGTCGAAC
GGCTTCTTTGTTTCTCGTTTAAAACAACCAAATATTGCTCCAACACTTCC
AGTACTTTCTCCACATTCACCAATGAATGCTAATATACATATAAATAGCC
AGCATACCCAACTTTCCGGTCGATATCTAAATAACAAAGTGTCCCAACAA
ATCGACACTGAAAGTATAAAAAGAGTGGCATCTAACCGATCTCTAAAGGA
CAGTCAAAACGTCTTATCCATTTCATCAACTCTAATATGCAACTGCGAGA
AGGCCCAAAAATCGAATGGCTCAGAAGCGGAAGCAAACGAAGAAATCAAA
ATTAAACTGAGCTCAGATACTGGTAACAAATCTACCATTAGTAAATTAAA
AGACCCGAAACTCTCTTCAGCGTCGGAAAAAAACGCATTAGATAATTCAA
CCGAGGGTTGTTTGCAATTGAAAAGTGTAATTGGAAAGGAGCAAAAATCG
CTGTCTCCGAGACTGACGTTACACAAGAGTGGGTTTCAACAGGCCATCAT
AATTTCCGACGACAGTGAGAACACGAAGTCTTCGCGATTAGGTACCCAAA
CAGCAAGGCAGCTCTCCAGTAATTCAGACAATCAATTTTATCGACAGCTT
ACCCATAAGATTAGCAAATCGGAGCAAACTTCCCCAAACAACTTGGAGCT
AGACAAAGCTAACTTTCTCTACGATACGAACAATAGGAGTACGGGCTGTT
TGGTGTATCCTTCGGATCCATGGATAAAGAACTCGCATATTAAGAACAGC
TTGTCCCCCAAAACGGAAAAGTATTCAAACACCATGCATCACAATATCGA
TCCGTGGGTCAAGAGACAAACAGATGCTGCTGTGGAAATCTCACGGCTTC
CCAAGAAAAATTTCTACCGCGAAAAATCCCTTTCTTCCATAAACAATAAA
CTAATTTCGACCAGAACTGAGAAATCAAAGTGTGCAAAGCCGCAGTTGAA
GCATTCGAAAACGGAGCTGGACGATGATCAAGTATTTTTAAATGAGCCAG
GATTGCTTTTTGCTCCATTCTCTCCGCAATATCGCAACACGTCGCATAAA
ATCTGGTCTCTCGACCAGCCTTCTAACGATCTGAAAGCCAACATTCAAAG
CAAGTCAGCTAGTTTTTTACCGGACAAGGTGAAGGAGATATCCAGTCCAT
TGCCGAACCATGTTAGAAAATCTGTACAACAAAACAATAGTAATTTGCTG
TGTCCGAATGTTCAAGCAAGATTATTGCTTCAAGTAGAAAAGCTGCATTC
TAGACACAGCTCCCTATCGATTCCCACTCAATCGAAGGATGAACTACCCC
TGAACATCCGTCGACTGTCCGAGCAGATCCGTGAACCGCCTTTGGAGAAA
AACATCTCATTATCCCTCAGCGATCGTAACGTTAGCAAAATTCCGACATC
TGATGGCGTGGGCGAGGCTCACCTGGTTGCCCCTCACAAGATGGACAAAT
TTCATGTGAGTAGGGATGCCGCAGTGCAGAGTACAAGCCACCTTGAAGAC
TTTATATCCCTACAACGAGGCCCCAAAGATTCCACAATTGTTAATAATGT
AAACCCCTTTACGAGTACTTATAAGCCTGATCCACTTTTAGAAACCACCT
GTTAAAACCATTTGCTAGGAAGCCGAAAACCGAAAGCCGATATTAAAGTG
TCTCTGCATAGCTCATTCATAGGTCATGAAAATATACAAAATATAAAACC
ACAAAAAACATACATACATATATGTCTTATATATCAATCGAATCTAAATA
TGAATAATAAACAAGTAATAAATAATAATTTTAGTAGTACCTTAAGTTTG
AAATTTTTACAGTGATTTTGCATTTATATTAAGTAACACTATAATGCCCT
GCCAACAATATGGGGCTAAGTTTTAGGCTTAACTACATTCGCAAAGCATA
TATATGTGTGTAATAGTGTATTTTCTCCTCATTTTATTGTCATTTTACAT
ATTTGTTGTAATACATTTTATAGTAATAAAATCTTTATAAAGAGCTAAGT
AACGCAAAAAAAAAAAAAAAAAAAAA

LD15705.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:08:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG33095-RA 2155 CG33095-RA 1..2155 1..2155 10775 100 Plus
CG33095-RB 2490 CG33095-RB 336..2490 1..2155 10775 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:33:31
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 20923145..20925299 1..2155 10670 99.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:03:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25099992..25102147 1..2156 10780 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:32:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 24840823..24842978 1..2156 10780 100 Plus
Blast to na_te.dros performed on 2019-03-16 16:33:29 has no hits.

LD15705.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:34:16 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 20923145..20925299 1..2155 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:50:25 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
CG33095-RB 1..1617 139..1755 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:46:20 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
CG33095-RB 1..1617 139..1755 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:17:37 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
CG33095-RA 1..1617 139..1755 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:15:04 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
CG33095-RB 1..1617 139..1755 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:33:20 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
CG33095-RA 1..1617 139..1755 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:29:47 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
CG33095-RA 1..2155 1..2155 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:46:20 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
CG33095-RB 336..2490 1..2155 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:17:37 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
CG33095-RA 1..2155 1..2155 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:15:04 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
CG33095-RA 1..2155 1..2155 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:33:20 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
CG33095-RB 1427..3581 1..2155 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:34:16 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25099992..25102146 1..2155 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:34:16 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25099992..25102146 1..2155 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:34:16 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25099992..25102146 1..2155 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:17:37 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20925714..20927868 1..2155 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:51:54 Download gff for LD15705.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24840823..24842977 1..2155 100   Plus

LD15705.hyp Sequence

Translation from 138 to 1754

> LD15705.hyp
MKSNGFFVSRLKQPNIAPTLPVLSPHSPMNANIHINSQHTQLSGRYLNNK
VSQQIDTESIKRVASNRSLKDSQNVLSISSTLICNCEKAQKSNGSEAEAN
EEIKIKLSSDTGNKSTISKLKDPKLSSASEKNALDNSTEGCLQLKSVIGK
EQKSLSPRLTLHKSGFQQAIIISDDSENTKSSRLGTQTARQLSSNSDNQF
YRQLTHKISKSEQTSPNNLELDKANFLYDTNNRSTGCLVYPSDPWIKNSH
IKNSLSPKTEKYSNTMHHNIDPWVKRQTDAAVEISRLPKKNFYREKSLSS
INNKLISTRTEKSKCAKPQLKHSKTELDDDQVFLNEPGLLFAPFSPQYRN
TSHKIWSLDQPSNDLKANIQSKSASFLPDKVKEISSPLPNHVRKSVQQNN
SNLLCPNVQARLLLQVEKLHSRHSSLSIPTQSKDELPLNIRRLSEQIREP
PLEKNISLSLSDRNVSKIPTSDGVGEAHLVAPHKMDKFHVSRDAAVQSTS
HLEDFISLQRGPKDSTIVNNVNPFTSTYKPDPLLETTC*

LD15705.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:57:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG33095-PB 538 CG33095-PB 1..538 1..538 2756 100 Plus
CG33095-PA 538 CG33095-PA 1..538 1..538 2756 100 Plus

LD15705.pep Sequence

Translation from 138 to 1754

> LD15705.pep
MKSNGFFVSRLKQPNIAPTLPVLSPHSPMNANIHINSQHTQLSGRYLNNK
VSQQIDTESIKRVASNRSLKDSQNVLSISSTLICNCEKAQKSNGSEAEAN
EEIKIKLSSDTGNKSTISKLKDPKLSSASEKNALDNSTEGCLQLKSVIGK
EQKSLSPRLTLHKSGFQQAIIISDDSENTKSSRLGTQTARQLSSNSDNQF
YRQLTHKISKSEQTSPNNLELDKANFLYDTNNRSTGCLVYPSDPWIKNSH
IKNSLSPKTEKYSNTMHHNIDPWVKRQTDAAVEISRLPKKNFYREKSLSS
INNKLISTRTEKSKCAKPQLKHSKTELDDDQVFLNEPGLLFAPFSPQYRN
TSHKIWSLDQPSNDLKANIQSKSASFLPDKVKEISSPLPNHVRKSVQQNN
SNLLCPNVQARLLLQVEKLHSRHSSLSIPTQSKDELPLNIRRLSEQIREP
PLEKNISLSLSDRNVSKIPTSDGVGEAHLVAPHKMDKFHVSRDAAVQSTS
HLEDFISLQRGPKDSTIVNNVNPFTSTYKPDPLLETTC*

LD15705.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:59:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11362-PA 539 GG11362-PA 1..539 1..538 2581 91.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:59:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18031-PA 524 GH18031-PA 1..524 6..538 300 29.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:06:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG33095-PB 538 CG33095-PB 1..538 1..538 2756 100 Plus
CG33095-PA 538 CG33095-PA 1..538 1..538 2756 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:59:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23820-PA 511 GI23820-PA 11..511 15..538 259 27.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:59:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21902-PA 533 GL21902-PA 1..533 1..538 985 43.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:59:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21175-PA 531 GD21175-PA 1..531 1..538 2689 95.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:59:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18948-PA 539 GK18948-PA 22..539 3..538 683 38.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:59:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23559-PA 273 GE23559-PA 1..273 266..538 1350 93.8 Plus