Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
LD15705.complete Sequence
2176 bp (2176 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061209
> LD15705.complete
CTTTAGCAAAAACAGTCGGGCTCATATTCAAAAGCCCAACCCTTCTCACC
ACAGTTCCCAAGCAGGGAACTATCAAGTAAATCGTGCGGAAACAGACATA
GTAAACAAAATAGGAAAGATGACCCACCATTAACCGATATGAAGTCGAAC
GGCTTCTTTGTTTCTCGTTTAAAACAACCAAATATTGCTCCAACACTTCC
AGTACTTTCTCCACATTCACCAATGAATGCTAATATACATATAAATAGCC
AGCATACCCAACTTTCCGGTCGATATCTAAATAACAAAGTGTCCCAACAA
ATCGACACTGAAAGTATAAAAAGAGTGGCATCTAACCGATCTCTAAAGGA
CAGTCAAAACGTCTTATCCATTTCATCAACTCTAATATGCAACTGCGAGA
AGGCCCAAAAATCGAATGGCTCAGAAGCGGAAGCAAACGAAGAAATCAAA
ATTAAACTGAGCTCAGATACTGGTAACAAATCTACCATTAGTAAATTAAA
AGACCCGAAACTCTCTTCAGCGTCGGAAAAAAACGCATTAGATAATTCAA
CCGAGGGTTGTTTGCAATTGAAAAGTGTAATTGGAAAGGAGCAAAAATCG
CTGTCTCCGAGACTGACGTTACACAAGAGTGGGTTTCAACAGGCCATCAT
AATTTCCGACGACAGTGAGAACACGAAGTCTTCGCGATTAGGTACCCAAA
CAGCAAGGCAGCTCTCCAGTAATTCAGACAATCAATTTTATCGACAGCTT
ACCCATAAGATTAGCAAATCGGAGCAAACTTCCCCAAACAACTTGGAGCT
AGACAAAGCTAACTTTCTCTACGATACGAACAATAGGAGTACGGGCTGTT
TGGTGTATCCTTCGGATCCATGGATAAAGAACTCGCATATTAAGAACAGC
TTGTCCCCCAAAACGGAAAAGTATTCAAACACCATGCATCACAATATCGA
TCCGTGGGTCAAGAGACAAACAGATGCTGCTGTGGAAATCTCACGGCTTC
CCAAGAAAAATTTCTACCGCGAAAAATCCCTTTCTTCCATAAACAATAAA
CTAATTTCGACCAGAACTGAGAAATCAAAGTGTGCAAAGCCGCAGTTGAA
GCATTCGAAAACGGAGCTGGACGATGATCAAGTATTTTTAAATGAGCCAG
GATTGCTTTTTGCTCCATTCTCTCCGCAATATCGCAACACGTCGCATAAA
ATCTGGTCTCTCGACCAGCCTTCTAACGATCTGAAAGCCAACATTCAAAG
CAAGTCAGCTAGTTTTTTACCGGACAAGGTGAAGGAGATATCCAGTCCAT
TGCCGAACCATGTTAGAAAATCTGTACAACAAAACAATAGTAATTTGCTG
TGTCCGAATGTTCAAGCAAGATTATTGCTTCAAGTAGAAAAGCTGCATTC
TAGACACAGCTCCCTATCGATTCCCACTCAATCGAAGGATGAACTACCCC
TGAACATCCGTCGACTGTCCGAGCAGATCCGTGAACCGCCTTTGGAGAAA
AACATCTCATTATCCCTCAGCGATCGTAACGTTAGCAAAATTCCGACATC
TGATGGCGTGGGCGAGGCTCACCTGGTTGCCCCTCACAAGATGGACAAAT
TTCATGTGAGTAGGGATGCCGCAGTGCAGAGTACAAGCCACCTTGAAGAC
TTTATATCCCTACAACGAGGCCCCAAAGATTCCACAATTGTTAATAATGT
AAACCCCTTTACGAGTACTTATAAGCCTGATCCACTTTTAGAAACCACCT
GTTAAAACCATTTGCTAGGAAGCCGAAAACCGAAAGCCGATATTAAAGTG
TCTCTGCATAGCTCATTCATAGGTCATGAAAATATACAAAATATAAAACC
ACAAAAAACATACATACATATATGTCTTATATATCAATCGAATCTAAATA
TGAATAATAAACAAGTAATAAATAATAATTTTAGTAGTACCTTAAGTTTG
AAATTTTTACAGTGATTTTGCATTTATATTAAGTAACACTATAATGCCCT
GCCAACAATATGGGGCTAAGTTTTAGGCTTAACTACATTCGCAAAGCATA
TATATGTGTGTAATAGTGTATTTTCTCCTCATTTTATTGTCATTTTACAT
ATTTGTTGTAATACATTTTATAGTAATAAAATCTTTATAAAGAGCTAAGT
AACGCAAAAAAAAAAAAAAAAAAAAA
LD15705.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:08:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33095-RA | 2155 | CG33095-RA | 1..2155 | 1..2155 | 10775 | 100 | Plus |
CG33095-RB | 2490 | CG33095-RB | 336..2490 | 1..2155 | 10775 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:33:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 20923145..20925299 | 1..2155 | 10670 | 99.7 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:03:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:33:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25099992..25102147 | 1..2156 | 10780 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:32:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 24840823..24842978 | 1..2156 | 10780 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 16:33:29 has no hits.
LD15705.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:34:16 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 20923145..20925299 | 1..2155 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:50:25 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33095-RB | 1..1617 | 139..1755 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:46:20 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33095-RB | 1..1617 | 139..1755 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:17:37 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33095-RA | 1..1617 | 139..1755 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:15:04 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33095-RB | 1..1617 | 139..1755 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:33:20 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33095-RA | 1..1617 | 139..1755 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:29:47 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33095-RA | 1..2155 | 1..2155 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:46:20 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33095-RB | 336..2490 | 1..2155 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:17:37 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33095-RA | 1..2155 | 1..2155 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:15:04 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33095-RA | 1..2155 | 1..2155 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:33:20 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33095-RB | 1427..3581 | 1..2155 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:34:16 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25099992..25102146 | 1..2155 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:34:16 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25099992..25102146 | 1..2155 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:34:16 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25099992..25102146 | 1..2155 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:17:37 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20925714..20927868 | 1..2155 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:51:54 Download gff for
LD15705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24840823..24842977 | 1..2155 | 100 | | Plus |
LD15705.hyp Sequence
Translation from 138 to 1754
> LD15705.hyp
MKSNGFFVSRLKQPNIAPTLPVLSPHSPMNANIHINSQHTQLSGRYLNNK
VSQQIDTESIKRVASNRSLKDSQNVLSISSTLICNCEKAQKSNGSEAEAN
EEIKIKLSSDTGNKSTISKLKDPKLSSASEKNALDNSTEGCLQLKSVIGK
EQKSLSPRLTLHKSGFQQAIIISDDSENTKSSRLGTQTARQLSSNSDNQF
YRQLTHKISKSEQTSPNNLELDKANFLYDTNNRSTGCLVYPSDPWIKNSH
IKNSLSPKTEKYSNTMHHNIDPWVKRQTDAAVEISRLPKKNFYREKSLSS
INNKLISTRTEKSKCAKPQLKHSKTELDDDQVFLNEPGLLFAPFSPQYRN
TSHKIWSLDQPSNDLKANIQSKSASFLPDKVKEISSPLPNHVRKSVQQNN
SNLLCPNVQARLLLQVEKLHSRHSSLSIPTQSKDELPLNIRRLSEQIREP
PLEKNISLSLSDRNVSKIPTSDGVGEAHLVAPHKMDKFHVSRDAAVQSTS
HLEDFISLQRGPKDSTIVNNVNPFTSTYKPDPLLETTC*
LD15705.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:57:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33095-PB | 538 | CG33095-PB | 1..538 | 1..538 | 2756 | 100 | Plus |
CG33095-PA | 538 | CG33095-PA | 1..538 | 1..538 | 2756 | 100 | Plus |
LD15705.pep Sequence
Translation from 138 to 1754
> LD15705.pep
MKSNGFFVSRLKQPNIAPTLPVLSPHSPMNANIHINSQHTQLSGRYLNNK
VSQQIDTESIKRVASNRSLKDSQNVLSISSTLICNCEKAQKSNGSEAEAN
EEIKIKLSSDTGNKSTISKLKDPKLSSASEKNALDNSTEGCLQLKSVIGK
EQKSLSPRLTLHKSGFQQAIIISDDSENTKSSRLGTQTARQLSSNSDNQF
YRQLTHKISKSEQTSPNNLELDKANFLYDTNNRSTGCLVYPSDPWIKNSH
IKNSLSPKTEKYSNTMHHNIDPWVKRQTDAAVEISRLPKKNFYREKSLSS
INNKLISTRTEKSKCAKPQLKHSKTELDDDQVFLNEPGLLFAPFSPQYRN
TSHKIWSLDQPSNDLKANIQSKSASFLPDKVKEISSPLPNHVRKSVQQNN
SNLLCPNVQARLLLQVEKLHSRHSSLSIPTQSKDELPLNIRRLSEQIREP
PLEKNISLSLSDRNVSKIPTSDGVGEAHLVAPHKMDKFHVSRDAAVQSTS
HLEDFISLQRGPKDSTIVNNVNPFTSTYKPDPLLETTC*
LD15705.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:59:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG11362-PA | 539 | GG11362-PA | 1..539 | 1..538 | 2581 | 91.7 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:59:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH18031-PA | 524 | GH18031-PA | 1..524 | 6..538 | 300 | 29.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:06:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33095-PB | 538 | CG33095-PB | 1..538 | 1..538 | 2756 | 100 | Plus |
CG33095-PA | 538 | CG33095-PA | 1..538 | 1..538 | 2756 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:59:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI23820-PA | 511 | GI23820-PA | 11..511 | 15..538 | 259 | 27.9 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:59:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL21902-PA | 533 | GL21902-PA | 1..533 | 1..538 | 985 | 43.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:59:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD21175-PA | 531 | GD21175-PA | 1..531 | 1..538 | 2689 | 95.7 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:59:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK18948-PA | 539 | GK18948-PA | 22..539 | 3..538 | 683 | 38.6 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:59:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE23559-PA | 273 | GE23559-PA | 1..273 | 266..538 | 1350 | 93.8 | Plus |