BDGP Sequence Production Resources |
Search the DGRC for LD15729
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 157 |
Well: | 29 |
Vector: | pBS SK- |
Associated Gene/Transcript | MED6-RA |
Protein status: | LD15729.pep: gold |
Preliminary Size: | 1179 |
Sequenced Size: | 1814 |
Gene | Date | Evidence |
---|---|---|
CG9473 | 2001-01-01 | Release 2 assignment |
CG9473 | 2002-05-17 | Blastp of sequenced clone |
MED6 | 2008-04-29 | Release 5.5 accounting |
MED6 | 2008-08-15 | Release 5.9 accounting |
MED6 | 2008-12-18 | 5.12 accounting |
1814 bp (1814 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118517
> LD15729.complete CTTAGCCGGTTATTTACACGGGACTTTGCAATATACACATCTCAGGTGGA ATAAACAAAGTTGGCAGCCATGGAAACAGCACAGACACACGCACGATCGC ATAGTTGAAAATCAAGACGCTCCCCTGCTGCTTCTTCTTCTCTGCACCAA ACAAAGCGCTGCCACCTCGCGAAGAACGTACACTGTCCAACACGGGCCAG CCGACTGGGTGCAGTGTTGCGAACTGCGGTCAGTCGACCAAGCGAAAATA ACAAACAAATCGGTTTTTTAGCGAGCGCAAGGCAAATCACGAGTAGAAAA CACAATAAAAGCTCGCTACAAAGGACAGTTAATCAGCAAAACACTTACAG TATTAACGTGAAGGTGGAGCAGCGAGAGCAGCGTGCACCACGGCCTGCTA AATTAATTATTACACAACAAATAAATCAAAAAACTGCCAGCGACAGTTTC CAATCGACAGCGTGCGGCCGAAAATAGCTTGTAAACAAAGCGATCGCTAG GAATAGGAAAAGGAAAAAGAAGCTCTCTCAACGCCATTGACCCACAAATT AGTCGTGGTCATTGCCAAGCGAGAAAACATTGCAGCCGCTTCCCACCGCC ACATCCCAACAAGGCGCACGTGCATCCACATCCACAATGGCCAGCCGACA GATGACCAATGACCACCTGCGCCTTTCCTGGCACGACACCCAGATGATGG CCACCCTCAGCCCGCAGACCGTCATGGACTACTTCTGCCGCAAGTCGAAT CCCTTCTATGATCACATGTGCAACAACGAGACTGTTCGGATGCAGCGCCT TGGTCCCGAGCATCTGCACAACATGATCGGTCTGGAATACATACTGCTGC ACGTGGCGGAGCCCATCCTGTATGTAATCCGCAAGCAGCACCGTCATAAT CCCTCGGAAGCCACGCCGATTGCCGATTACTACATCATTGGTGGCACCGT CTACAAGGCGCCAGATCTTGCCAACGTCATCAATTCCCGCATTCTCAACA CCGTGGTGAACCTGCAATCCGCCTTCGAGGAGGCTAGTAGCTATGCCCGC TACCATCCCAACAAGGGCTACACGTGGGACTTCTCTTCCAATAAAGTTTT TTCAGATAGATCCAAGTCAGATAAGAAGGACGCCAACTCAGCGAAGGATG AGAACAGCGGCACACTGTTCCAGAAGCAGCGTGTGGACATGCTGCTGGCA GAGCTTTTGCGTAAATTTCCCCCACCAATACCGCCCATGCTGCAGAATCT CCAGCAGCCGCCACCAGCGGGCGATGATCTGAACACAGCGAGAAATGCCT CCGAAATGAACAATGCCACAGGACCGCTAGATATCAAAACCGAGGGTGTG GACATGAAGCCACCGCCCGAAAAGAAGAGCAAGTGATTATGTGAATGCAG GTGCACCCTCAAAAAACGTACATACATATTAGTCCGAGTCCTTTGGCAGC TGCATAAAAGGCGCTGAATGCTGCCTGCATTTCCACTGGCCAAACCAACG CTCAGCGAAAAGCAGCGAAATCTACTTTTGCTAGTACTGCCAACTATTTT TTTTTAAAGTGGCTCTAACTAGTGACCATTTAAATATTCAAATTTTAAAA CGCAATTTTTGTTCCGTGAGAAAACAATTAAGAACAACAATCAATAACCT TAACAAAAAAAAAAAGAAAACACAAAATTCAAAACTAAAATAGTTTTTAG TAACCTAGAATATAATGTAATTACTGTCATTTAGACTACGATAGTTATTT TTGTGTGAATGTCATACGAAAACCTAAAAAATTCACAAAGCAGTCCAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MED6-RA | 1806 | MED6-RA | 11..1806 | 1..1796 | 8980 | 100 | Plus |
MED6-RC | 1770 | MED6-RC | 90..1770 | 116..1796 | 8405 | 100 | Plus |
MED6.b | 1741 | MED6.b | 91..1734 | 154..1797 | 8220 | 100 | Plus |
MED6.b | 1741 | MED6.b | 1..93 | 24..116 | 465 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5593012..5593708 | 818..122 | 3470 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 5591867..5592562 | 1796..1100 | 3390 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 5592783..5592957 | 993..819 | 875 | 100 | Minus |
chr3R | 27901430 | chr3R | 5594200..5594315 | 116..1 | 580 | 100 | Minus |
chr3R | 27901430 | chr3R | 5592623..5592728 | 1099..994 | 530 | 100 | Minus |
chrX | 22417052 | chrX | 8585602..8585747 | 1555..1412 | 410 | 87 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 9767177..9767880 | 818..115 | 3520 | 100 | Minus |
3R | 32079331 | 3R | 9766030..9766727 | 1797..1100 | 3490 | 100 | Minus |
3R | 32079331 | 3R | 9766948..9767122 | 993..819 | 875 | 100 | Minus |
3R | 32079331 | 3R | 9768364..9768479 | 116..1 | 580 | 100 | Minus |
3R | 32079331 | 3R | 9766788..9766893 | 1099..994 | 530 | 100 | Minus |
X | 23542271 | X | 8693832..8693977 | 1555..1412 | 410 | 87 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 9508008..9508711 | 818..115 | 3520 | 100 | Minus |
3R | 31820162 | 3R | 9506861..9507558 | 1797..1100 | 3490 | 100 | Minus |
3R | 31820162 | 3R | 9507779..9507953 | 993..819 | 875 | 100 | Minus |
3R | 31820162 | 3R | 9509195..9509310 | 116..1 | 580 | 100 | Minus |
3R | 31820162 | 3R | 9507619..9507724 | 1099..994 | 530 | 100 | Minus |
X | 23527363 | X | 8702001..8702075 | 1486..1412 | 285 | 92 | Minus |
X | 23527363 | X | 8701930..8701988 | 1555..1497 | 220 | 91.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5591867..5592562 | 1100..1796 | 99 | <- | Minus |
chr3R | 5592623..5592728 | 994..1099 | 100 | <- | Minus |
chr3R | 5592783..5592957 | 819..993 | 100 | <- | Minus |
chr3R | 5593012..5593714 | 117..818 | 99 | <- | Minus |
chr3R | 5594200..5594315 | 1..116 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED6-RA | 1..750 | 637..1386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED6-RC | 1..750 | 637..1386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED6-RC | 1..750 | 637..1386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED6-RA | 1..750 | 637..1386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED6-RC | 1..750 | 637..1386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED6-RA | 1..1795 | 2..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED6-RA | 11..1806 | 1..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED6-RA | 24..1819 | 1..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED6-RA | 1..1795 | 2..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED6-RA | 24..1819 | 1..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9766031..9766727 | 1100..1796 | 100 | <- | Minus |
3R | 9766788..9766893 | 994..1099 | 100 | <- | Minus |
3R | 9766948..9767122 | 819..993 | 100 | <- | Minus |
3R | 9767177..9767878 | 117..818 | 100 | <- | Minus |
3R | 9768364..9768479 | 1..116 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9766031..9766727 | 1100..1796 | 100 | <- | Minus |
3R | 9766788..9766893 | 994..1099 | 100 | <- | Minus |
3R | 9766948..9767122 | 819..993 | 100 | <- | Minus |
3R | 9767177..9767878 | 117..818 | 100 | <- | Minus |
3R | 9768364..9768479 | 1..116 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9766031..9766727 | 1100..1796 | 100 | <- | Minus |
3R | 9766788..9766893 | 994..1099 | 100 | <- | Minus |
3R | 9766948..9767122 | 819..993 | 100 | <- | Minus |
3R | 9767177..9767878 | 117..818 | 100 | <- | Minus |
3R | 9768364..9768479 | 1..116 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5591753..5592449 | 1100..1796 | 100 | <- | Minus |
arm_3R | 5592510..5592615 | 994..1099 | 100 | <- | Minus |
arm_3R | 5592670..5592844 | 819..993 | 100 | <- | Minus |
arm_3R | 5592899..5593600 | 117..818 | 100 | <- | Minus |
arm_3R | 5594086..5594201 | 1..116 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9509195..9509310 | 1..116 | 100 | Minus | |
3R | 9506862..9507558 | 1100..1796 | 100 | <- | Minus |
3R | 9507619..9507724 | 994..1099 | 100 | <- | Minus |
3R | 9507779..9507953 | 819..993 | 100 | <- | Minus |
3R | 9508008..9508709 | 117..818 | 100 | <- | Minus |
Translation from 636 to 1385
> LD15729.pep MASRQMTNDHLRLSWHDTQMMATLSPQTVMDYFCRKSNPFYDHMCNNETV RMQRLGPEHLHNMIGLEYILLHVAEPILYVIRKQHRHNPSEATPIADYYI IGGTVYKAPDLANVINSRILNTVVNLQSAFEEASSYARYHPNKGYTWDFS SNKVFSDRSKSDKKDANSAKDENSGTLFQKQRVDMLLAELLRKFPPPIPP MLQNLQQPPPAGDDLNTARNASEMNNATGPLDIKTEGVDMKPPPEKKSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23191-PA | 251 | GF23191-PA | 1..251 | 1..249 | 1175 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17328-PA | 249 | GG17328-PA | 1..249 | 1..249 | 1322 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14337-PA | 255 | GH14337-PA | 1..255 | 1..249 | 1141 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MED6-PE | 249 | CG9473-PE | 1..249 | 1..249 | 1325 | 100 | Plus |
MED6-PD | 249 | CG9473-PD | 1..249 | 1..249 | 1325 | 100 | Plus |
MED6-PC | 249 | CG9473-PC | 1..249 | 1..249 | 1325 | 100 | Plus |
MED6-PA | 249 | CG9473-PA | 1..249 | 1..249 | 1325 | 100 | Plus |
MED6-PB | 249 | CG9473-PB | 1..249 | 1..249 | 1325 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24883-PA | 253 | GI24883-PA | 1..253 | 1..249 | 1131 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23233-PA | 258 | GL23233-PA | 1..258 | 1..249 | 1144 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21815-PA | 258 | GA21815-PA | 1..258 | 1..249 | 1163 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26214-PA | 249 | GM26214-PA | 1..249 | 1..249 | 1335 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24525-PA | 258 | GJ24525-PA | 1..258 | 1..249 | 1156 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11125-PA | 256 | GK11125-PA | 1..256 | 1..249 | 1152 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24733-PA | 249 | GE24733-PA | 1..249 | 1..249 | 1317 | 97.2 | Plus |
Translation from 636 to 1385
> LD15729.hyp MASRQMTNDHLRLSWHDTQMMATLSPQTVMDYFCRKSNPFYDHMCNNETV RMQRLGPEHLHNMIGLEYILLHVAEPILYVIRKQHRHNPSEATPIADYYI IGGTVYKAPDLANVINSRILNTVVNLQSAFEEASSYARYHPNKGYTWDFS SNKVFSDRSKSDKKDANSAKDENSGTLFQKQRVDMLLAELLRKFPPPIPP MLQNLQQPPPAGDDLNTARNASEMNNATGPLDIKTEGVDMKPPPEKKSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MED6-PE | 249 | CG9473-PE | 1..249 | 1..249 | 1325 | 100 | Plus |
MED6-PD | 249 | CG9473-PD | 1..249 | 1..249 | 1325 | 100 | Plus |
MED6-PC | 249 | CG9473-PC | 1..249 | 1..249 | 1325 | 100 | Plus |
MED6-PA | 249 | CG9473-PA | 1..249 | 1..249 | 1325 | 100 | Plus |
MED6-PB | 249 | CG9473-PB | 1..249 | 1..249 | 1325 | 100 | Plus |