Clone LD15807 Report

Search the DGRC for LD15807

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:158
Well:7
Vector:pBS SK-
Associated Gene/TranscriptCG15771-RA
Protein status:LD15807.pep: gold
Sequenced Size:1680

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15771 2008-04-29 Release 5.5 accounting
CG15771 2008-04-29 Picked prior to 5.5
CG15771 2008-08-15 Release 5.9 accounting
CG15771 2008-12-18 5.12 accounting

Clone Sequence Records

LD15807.complete Sequence

1680 bp assembled on 2007-11-08

GenBank Submission: BT031127

> LD15807.complete
CCGCGCGAGAAGCGGAAACTTTTGCCAGTCCGCTCGAGGAAAATAGAAAA
ATACTGCAGTGCTGCTGCAGTCGTGCAGCTCGTACATTTCGTTTCGTTTC
GTTTGGCGCCAATTTCAAAGCGCAAATCCGCTGGCGGATTGAATTGCACC
AAAGTTGTTCTTGGATCTCTACGTTTGCATCCATCCATCTAACCAAGCAA
CCGGCTACCACCCCTCCACTCCTGACAGTGACCCCTCGCTGACCCTCCAT
CCCCCCCTCCGCTCGACGACTCTCATGGCAGCTAGCAAATTCCATTGCGG
CAAGCAATTGACAGCCACACATTCACATTTCGATGCGACATGTGCGAAAA
TCAGGGCCTTTTACTTTGACCTGGACAACACGTTGATTCCCACCAGAGCC
GGCGATTCCAAGGCGATCAGAAAGCTCGCTGATTTTCTGGAGACCCAATA
CCAGTTCAGCAAAGATGACGCAACACAGGCCACCCAAAACTTTCTAAAGG
CCTTCCGCCGCTGTCCCGATAACTCGCAAACATCGCTGGACTCGTGGCGC
ACTCACCTGTGGCGCGAATCCCTTCCAGCGCGCCACAAGCACCTGGCGGA
ACAGATCTATCCCAAGTGGCTGAAGTTGCGGTATCGCTACCTAGCCGTTC
CGGCGGACTATGTCCAGCTGCTGCTGCGGATGCGCCAGGCAGGCTATGCC
CTGGCCCTCATCACCAACGGACCGTCGAACGCTCAGTGGGAGAAGGTGGC
TGAGCTGAATGTGCGCGGCTACTTTGACTGCGTGCTGGTCTCATCGGATC
TGCCATGGGAGAAACCGCATCCGGAGATCTTCTATGCCGCCTGCAACTTT
CTCAATGTCAAGCCGCAGGAGTGCGTCATGATCGGCGACAAACTGGAGAC
CGACATCAAGGGCGGTCACTTGGCCCAGCTGGGTCTCACATTCTGGACGC
CACTAAGCAATAGCAGCGCGGCGGCACAATCGCTAGAGGATGTGGAGTAC
AAGCCGCACGTCAAGCTGGGCAGCCTGCTGGAGATGTACAAGTACTTTCC
GCGCCTCAACTCAGTCGCTCTGCCCGAGATGCCGTCGGTTTCCAGAAGAC
GTGGCAGCCACATGAGTCCCATTAGCCAGGGCTCCGGCAGCGGAAGCAGC
TCCAGCGCCATTTGTGTGCCGGGTGCTGGCCATGGATACCATCACCACCA
CCACCAGCAGCACCAGGAGCAGCAGCAGCAGCATCATCATCATCATCATC
AGAGGCAGTGGCTTTATCGACGAGGCGTTTCACTGCCCGCCATGGATTGC
TCCAATAGCGAGGCGGAGAACAGCTGCGACAGTTTTCTGTAGGCAGTGCG
GAGGATGTGTTGAGTATCGAATGAATCGATACGAATGACGAGAGATTGTT
GAAAAATGTACCTTCAGTTTACAAAACTATAGCTAAAGAGGATTGAGGAT
TGATGATCGTAGAACGGGAGTAATATTCACGGATGGATCACGAAGAAGGA
CAGCCAGGAGAATTGGAAACGAGTGCAGGAATTTAAAGTTCAACTATTAG
CGGGAGGAGCCCGGAAGCACGGTGAATCTCGCTATCTGCCATTAAACTAA
AATTAAGGCTAGCAAACAGCATCGGAGCACACAAACTACTACGGCCAACA
AGTACATGGAACAAAAAAAAAAAAAAAAAA

LD15807.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:34:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG15771-RA 2512 CG15771-RA 144..1818 1..1675 8345 99.8 Plus
CG15771.a 2292 CG15771.a 456..1710 421..1675 6245 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:21:42
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 5650826..5651579 909..1662 3770 100 Plus
chrX 22417052 chrX 5650283..5650771 423..911 2445 100 Plus
chrX 22417052 chrX 5648204..5648627 1..424 2120 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:03:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:21:40
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5758403..5759169 909..1675 3805 99.7 Plus
X 23542271 X 5757860..5758348 423..911 2445 100 Plus
X 23542271 X 5755781..5756204 1..424 2120 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:31:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 5766501..5767267 909..1675 3805 99.7 Plus
X 23527363 X 5765958..5766446 423..911 2445 100 Plus
X 23527363 X 5763879..5764302 1..424 2120 100 Plus
Blast to na_te.dros performed on 2019-03-16 11:21:40 has no hits.

LD15807.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:22:43 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 5648204..5648627 1..424 100 -> Plus
chrX 5650285..5650770 425..910 100 -> Plus
chrX 5650828..5651104 911..1187 100 == Plus
chrX 5651169..5651579 1252..1662 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:50:30 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
CG15771-RA 1..1068 275..1342 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:04:10 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
CG15771-RA 1..1068 275..1342 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:44:06 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
CG15771-RA 1..1068 275..1342 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:49:59 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
CG15771-RA 1..1068 275..1342 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:13:54 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
CG15771-RA 1..1068 275..1342 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:55:31 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
CG15771-RA 144..1805 1..1662 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:04:10 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
CG15771-RA 144..1805 1..1662 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:44:06 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
CG15771-RA 34..1695 1..1662 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:50:00 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
CG15771-RA 144..1805 1..1662 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:13:54 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
CG15771-RA 34..1695 1..1662 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:22:43 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
X 5755781..5756204 1..424 100 -> Plus
X 5757862..5758347 425..910 100 -> Plus
X 5758405..5759156 911..1662 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:22:43 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
X 5755781..5756204 1..424 100 -> Plus
X 5757862..5758347 425..910 100 -> Plus
X 5758405..5759156 911..1662 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:22:43 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
X 5755781..5756204 1..424 100 -> Plus
X 5757862..5758347 425..910 100 -> Plus
X 5758405..5759156 911..1662 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:44:06 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 5649814..5650237 1..424 100 -> Plus
arm_X 5651895..5652380 425..910 100 -> Plus
arm_X 5652438..5653189 911..1662 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:56:15 Download gff for LD15807.complete
Subject Subject Range Query Range Percent Splice Strand
X 5763879..5764302 1..424 100 -> Plus
X 5765960..5766445 425..910 100 -> Plus
X 5766503..5767254 911..1662 100   Plus

LD15807.pep Sequence

Translation from 274 to 1341

> LD15807.pep
MAASKFHCGKQLTATHSHFDATCAKIRAFYFDLDNTLIPTRAGDSKAIRK
LADFLETQYQFSKDDATQATQNFLKAFRRCPDNSQTSLDSWRTHLWRESL
PARHKHLAEQIYPKWLKLRYRYLAVPADYVQLLLRMRQAGYALALITNGP
SNAQWEKVAELNVRGYFDCVLVSSDLPWEKPHPEIFYAACNFLNVKPQEC
VMIGDKLETDIKGGHLAQLGLTFWTPLSNSSAAAQSLEDVEYKPHVKLGS
LLEMYKYFPRLNSVALPEMPSVSRRRGSHMSPISQGSGSGSSSSAICVPG
AGHGYHHHHHQQHQEQQQQHHHHHHQRQWLYRRGVSLPAMDCSNSEAENS
CDSFL*

LD15807.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:41:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20804-PA 346 GF20804-PA 1..346 1..355 1399 76.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:41:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18782-PA 345 GG18782-PA 1..345 1..355 1529 87 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:41:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24136-PA 340 GH24136-PA 1..340 1..355 1243 69.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG15771-PD 355 CG15771-PD 1..355 1..355 1922 100 Plus
CG15771-PA 355 CG15771-PA 1..355 1..355 1922 100 Plus
CG15771-PC 220 CG15771-PC 1..220 136..355 1200 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:41:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16391-PA 353 GI16391-PA 1..353 1..355 1311 72.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:41:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14466-PA 296 GL14466-PA 1..296 1..355 1091 65.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:41:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13946-PA 331 GA13946-PA 1..331 1..355 1284 72.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:41:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12434-PA 306 GM12434-PA 7..306 50..355 1542 94.4 Plus
Dsec\GM19534-PA 54 GM19534-PA 1..51 1..47 219 84.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:41:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16749-PA 352 GD16749-PA 1..352 1..355 1825 95.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:41:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17009-PA 352 GJ17009-PA 1..352 1..355 1338 73.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:41:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24925-PA 343 GK24925-PA 1..343 1..355 1304 71.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:41:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16428-PA 350 GE16428-PA 1..350 1..355 1653 93.2 Plus

LD15807.hyp Sequence

Translation from 274 to 1341

> LD15807.hyp
MAASKFHCGKQLTATHSHFDATCAKIRAFYFDLDNTLIPTRAGDSKAIRK
LADFLETQYQFSKDDATQATQNFLKAFRRCPDNSQTSLDSWRTHLWRESL
PARHKHLAEQIYPKWLKLRYRYLAVPADYVQLLLRMRQAGYALALITNGP
SNAQWEKVAELNVRGYFDCVLVSSDLPWEKPHPEIFYAACNFLNVKPQEC
VMIGDKLETDIKGGHLAQLGLTFWTPLSNSSAAAQSLEDVEYKPHVKLGS
LLEMYKYFPRLNSVALPEMPSVSRRRGSHMSPISQGSGSGSSSSAICVPG
AGHGYHHHHHQQHQEQQQQHHHHHHQRQWLYRRGVSLPAMDCSNSEAENS
CDSFL*

LD15807.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:40:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG15771-PD 355 CG15771-PD 1..355 1..355 1922 100 Plus
CG15771-PA 355 CG15771-PA 1..355 1..355 1922 100 Plus
CG15771-PC 220 CG15771-PC 1..220 136..355 1200 100 Plus